Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
NRD1	4898	hgsc.bcm.edu	hg19	1	52306079	52306079	+	Missense_Mutation	SNP	T	T	A	rs62648104	bycluster	TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	NRD1	NM_002525	exon2	c.A449T	p.E150V	TCTTCCTCCACCT	.	268.0	18.0	303.0	0.0	.	89	.	T|0.024;A|0.976	Atlas-SNP
BIRC6	57448	hgsc.bcm.edu	hg19	2	32768519	32768519	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	BIRC6	NM_016252	exon62	c.C12503T	p.P4168L	GTCTTCCGGGCTA	.	90.0	12.0	90.0	0.0	.	838	.	.	Atlas-SNP
USP34	9736	hgsc.bcm.edu	hg19	2	61607465	61607465	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	USP34,bladder,carcinoma,0,2	USP34	NM_014709	exon7	c.C853T	p.R285X	TCTGTCGTAACTC	.	84.0	12.0	132.0	0.0	.	334	.	.	Atlas-SNP
GADL1	339896	hgsc.bcm.edu	hg19	3	30903143	30903143	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	GADL1	NM_207359	exon2	c.A152T	p.E51V	CAGGCCTCTTCAA	.	244.0	18.0	265.0	0.0	.	91	.	.	Atlas-SNP
ADH4	127	hgsc.bcm.edu	hg19	4	100052694	100052694	+	Silent	SNP	C	C	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	ADH4	NM_000670	exon6	c.G804C	p.V268V	AAAATCCACACCT	.	98.0	10.0	86.0	0.0	.	35	.	.	Atlas-SNP
FNDC1	84624	hgsc.bcm.edu	hg19	6	159646689	159646689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	FNDC1	NM_032532	exon8	c.G1007A	p.R336H	CAGTCCGTATTTC	.	78.0	18.0	80.0	0.0	.	250	.	.	Atlas-SNP
CBLL1	79872	hgsc.bcm.edu	hg19	7	107399297	107399297	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	CBLL1	NM_024814	exon6	c.A1150G	p.I384V	CCACCAATAACCC	.	89.0	21.0	92.0	0.0	.	54	.	.	Atlas-SNP
MYOM2	9172	hgsc.bcm.edu	hg19	8	2017578	2017578	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	MYOM2	NM_003970	exon8	c.A755T	p.D252V	GGGGAGACGAGGA	.	271.0	33.0	272.0	0.0	.	251	.	.	Atlas-SNP
LONRF1	91694	hgsc.bcm.edu	hg19	8	12600698	12600698	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	LONRF1	NM_152271	exon2	c.T815G	p.L272R	TGAAAAAGAACTG	.	222.0	20.0	216.0	0.0	.	45	.	.	Atlas-SNP
SGCZ	137868	hgsc.bcm.edu	hg19	8	13948007	13948007	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	SGCZ	NM_139167	exon8	c.C884A	p.P295Q	CCTGCTGGAGAAA	.	66.0	5.0	66.0	0.0	.	96	.	.	Atlas-SNP
MRC1	4360	hgsc.bcm.edu	hg19	10	18122743	18122743	+	Silent	SNP	C	C	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	MRC1	NM_002438	exon4	c.C753T	p.N251N	ACAGAACGCTGAG	.	189.0	18.0	181.0	0.0	.	13	.	.	Atlas-SNP
FAM155A	728215	hgsc.bcm.edu	hg19	13	108518523	108518523	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	FAM155A	NM_001080396	exon1	c.G422C	p.G141A	CCGCCGCCGCCGC	.	65.0	15.0	50.0	0.0	.	82	.	.	Atlas-SNP
CDAN1	146059	hgsc.bcm.edu	hg19	15	43021296	43021296	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	CDAN1	NM_138477	exon19	c.A2570G	p.N857S	GGCTGGTTGTGGA	.	69.0	6.0	55.0	0.0	.	70	.	.	Atlas-SNP
LRRK1	79705	hgsc.bcm.edu	hg19	15	101608980	101608980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	LRRK1	NM_024652	exon34	c.G5975A	p.R1992K	GCGCCAGGGAGTT	.	112.0	8.0	96.0	0.0	.	310	.	.	Atlas-SNP
MYH11	4629	hgsc.bcm.edu	hg19	16	15815347	15815347	+	Silent	SNP	G	G	T	rs144823441	alternate_allele	TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	MYH11_ENST00000396324,colon,carcinoma,0,2	MYH11	NM_001040114	exon33	c.C4531A	p.R1511R	TGGTCCGCTCGAG	.	182.0	31.0	175.0	0.0	.	520	.	G|1.000;A|0.000	Atlas-SNP
PCSK4	54760	hgsc.bcm.edu	hg19	19	1487019	1487019	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	PCSK4	NM_017573	exon8	c.G901A	p.G301S	GGCCGCCGTTGCC	.	69.0	4.0	50.0	0.0	.	44	.	.	Atlas-SNP
ZFR2	23217	hgsc.bcm.edu	hg19	19	3806099	3806099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	ZFR2	NM_015174	exon19	c.C2668T	p.R890W	TCTGCCGGAAGGC	.	88.0	10.0	69.0	0.0	.	63	.	.	Atlas-SNP
ZNF700	90592	hgsc.bcm.edu	hg19	19	12059950	12059950	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	ZNF700	NM_001271848	exon4	c.T1120C	p.F374L	AAAGGCTTTTATT	.	68.0	9.0	69.0	0.0	.	81	.	.	Atlas-SNP
NUP50	10762	hgsc.bcm.edu	hg19	22	45580526	45580526	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	NUP50	NM_007172	exon8	c.A1397G	p.K466R	AGAAAAAGGATGC	.	118.0	7.0	155.0	0.0	.	24	.	.	Atlas-SNP
LGALS2	3957	hgsc.bcm.edu	hg19	22	37966624	37966626	+	In_Frame_Del	DEL	GTT	GTT	-	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	GTT	GTT	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	LGALS2	NM_006498	exon3	c.207_209del	p.69_70del	.	.	135.0	11.0	122.0	0.0	.	16	.	.	Atlas-INDEL
TCERG1	10915	hgsc.bcm.edu	hg19	5	145838623	145838624	+	In_Frame_Ins	INS	-	-	CAGGCT	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	TCERG1	NM_006706	exon4	c.615_616insCAGGCT	p.A205delinsAQA	.	.	103.0	35.0	93.0	0.0	.	148	.	.	Atlas-INDEL
MKI67	4288	hgsc.bcm.edu	hg19	10	129903267	129903267	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	MKI67	NM_002417	exon13	c.6838delA	p.K2280fs	.	.	202.0	23.0	198.0	0.0	.	363	.	.	Atlas-Indel,Pindel