Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
CARS	833	genome.wustl.edu	36	11	3004584	3004584	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	3004584	3004584	CARS	11	C	C	G	17
TP53	7157	genome.wustl.edu	36	17	7518334	7518334	+	Splice_Site_SNP	SNP	C	T	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	7518334	7518334	TP53	17	C	T	T	24
GPR78	27201	genome.wustl.edu	36	4	8635215	8635215	+	Missense_Mutation	SNP	G	T	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	8635215	8635215	GPR78	4	G	T	T	33
PZP	5858	genome.wustl.edu	36	12	9246425	9246425	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	9246425	9246425	PZP	12	G	G	A	41
WWC3	55841	genome.wustl.edu	36	X	9995469	9995469	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	9995469	9995469	WWC3	23	C	C	T	22
CSGALNACT1	55790	genome.wustl.edu	36	8	19360412	19360412	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	19360412	19360412	CSGALNACT1	8	T	T	C	58
LOC645490	645490	genome.wustl.edu	36	11	20552850	20552851	+	Missense	DNP	GG	TC	TC	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	GG	GG	TC	TC	GG	GG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	20552850	20552851	LOC645490	11	GG	TC	TC	47
EBF2	64641	genome.wustl.edu	36	8	25955570	25955570	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	25955570	25955570	EBF2	8	C	C	A	32
HOXA2	3199	genome.wustl.edu	36	7	27106929	27106929	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27106929	27106929	HOXA2	7	T	T	C	55
CLU	1191	genome.wustl.edu	36	8	27518595	27518595	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27518595	27518595	CLU	8	G	G	A	39
TRAPPC8	22878	genome.wustl.edu	36	18	27698596	27698596	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	27698596	27698596	TRAPPC8	18	G	G	A	36
TRIM39	56658	genome.wustl.edu	36	6	30417509	30417509	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	30417509	30417509	TRIM39	6	G	G	C	36
RBBP4	5928	genome.wustl.edu	36	1	32895695	32895695	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	32895695	32895695	RBBP4	1	C	C	A	26
SON	6651	genome.wustl.edu	36	21	33848752	33848752	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	33848752	33848752	SON	21	C	C	T	32
CA9	768	genome.wustl.edu	36	9	35666372	35666372	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	35666372	35666372	CA9	9	G	G	A	42
MAGEB16	139604	genome.wustl.edu	36	X	35730537	35730537	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	35730537	35730537	MAGEB16	23	T	T	A	49
FAM47C	442444	genome.wustl.edu	36	X	36938334	36938334	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36938334	36938334	FAM47C	23	C	C	G	22
SOS1	6654	genome.wustl.edu	36	2	39066780	39066780	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	39066780	39066780	SOS1	2	G	G	C	36
CDKL4	344387	genome.wustl.edu	36	2	39294099	39294099	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	39294099	39294099	CDKL4	2	G	G	C	45
RTF1	23168	genome.wustl.edu	36	15	39559776	39559776	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	39559776	39559776	RTF1	15	G	G	C	37
SLC28A2	9153	genome.wustl.edu	36	15	43341525	43341525	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	43341525	43341525	SLC28A2	15	G	G	A	34
ELK1	2002	genome.wustl.edu	36	X	47385680	47385680	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	47385680	47385680	ELK1	23	C	C	G	28
PKD1L1	168507	genome.wustl.edu	36	7	47872723	47872723	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	47872723	47872723	PKD1L1	7	A	A	C	7
PKD1L1	168507	genome.wustl.edu	36	7	47900115	47900115	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	47900115	47900115	PKD1L1	7	G	G	T	43
ZNF229	7772	genome.wustl.edu	36	19	49626013	49626013	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	49626013	49626013	ZNF229	19	T	T	C	54
ARL15	54622	genome.wustl.edu	36	5	53503386	53503386	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53503386	53503386	ARL15	5	C	C	A	19
OR5I1	10798	genome.wustl.edu	36	11	55459861	55459861	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55459861	55459861	OR5I1	11	C	C	T	29
DIAPH3	81624	genome.wustl.edu	36	13	59311503	59311503	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	59311503	59311503	DIAPH3	13	G	G	A	41
HERC1	8925	genome.wustl.edu	36	15	61739125	61739125	+	Nonsense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	61739125	61739125	HERC1	15	A	A	C	13
ADAMTS3	9508	genome.wustl.edu	36	4	73390622	73390622	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	73390622	73390622	ADAMTS3	4	G	G	C	43
SEC11A	23478	genome.wustl.edu	36	15	83014261	83014261	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	83014261	83014261	SEC11A	15	C	C	T	19
LRRIQ1	84125	genome.wustl.edu	36	12	83991003	83991003	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	83991003	83991003	LRRIQ1	12	G	G	C	41
SYDE2	84144	genome.wustl.edu	36	1	85428505	85428505	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	85428505	85428505	SYDE2	1	A	A	C	11
ENSG00000211634		genome.wustl.edu	36	2	89886467	89886467	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	89886467	89886467	ENSG00000211634	2	A	A	C	7
NR2F1	7025	genome.wustl.edu	36	5	92955171	92955171	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	92955171	92955171	NR2F1	5	T	T	G	59
HEPHL1	341208	genome.wustl.edu	36	11	93478930	93478930	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	93478930	93478930	HEPHL1	11	A	A	T	11
HEMGN	55363	genome.wustl.edu	36	9	99733038	99733038	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	99733038	99733038	HEMGN	9	C	C	A	28
CHUK	1147	genome.wustl.edu	36	10	101968473	101968473	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	101968473	101968473	CHUK	10	G	G	A	42
RIMS2	9699	genome.wustl.edu	36	8	105079642	105079642	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	105079642	105079642	RIMS2	8	A	A	T	6
ENSG00000211945		genome.wustl.edu	36	14	105712750	105712750	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	105712750	105712750	ENSG00000211945	14	A	A	T	12
SMC2	10592	genome.wustl.edu	36	9	105927141	105927141	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	105927141	105927141	SMC2	9	G	G	A	33
BEND3	57673	genome.wustl.edu	36	6	107498431	107498431	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	107498431	107498431	BEND3	6	C	C	T	25
ACAD10	80724	genome.wustl.edu	36	12	110671532	110671532	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	110671532	110671532	ACAD10	12	C	C	T	27
SVEP1	79987	genome.wustl.edu	36	9	112208884	112208884	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	112208884	112208884	SVEP1	9	T	T	G	55
ZCCHC12	170261	genome.wustl.edu	36	X	117843682	117843682	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	117843682	117843682	ZCCHC12	23	G	G	A	45
PTPRZ1	5803	genome.wustl.edu	36	7	121486093	121486093	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	121486093	121486093	PTPRZ1	7	G	G	A	45
C11orf63	79864	genome.wustl.edu	36	11	122279934	122279934	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	122279934	122279934	C11orf63	11	G	G	C	34
THOC2	57187	genome.wustl.edu	36	X	122657585	122657585	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	122657585	122657585	THOC2	23	C	C	T	29
FBXO40	51725	genome.wustl.edu	36	3	122824185	122824185	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	122824185	122824185	FBXO40	3	G	G	T	33
LAMA2	3908	genome.wustl.edu	36	6	129868037	129868037	+	Splice_Site_SNP	SNP	G	T	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	129868037	129868037	LAMA2	6	G	T	T	33
MEST	4232	genome.wustl.edu	36	7	129925243	129925243	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	129925243	129925243	MEST	7	C	C	T	25
PLXNA4	91584	genome.wustl.edu	36	7	131483904	131483904	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	131483904	131483904	PLXNA4	7	C	C	A	29
AKAP7	9465	genome.wustl.edu	36	6	131644385	131644385	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	131644385	131644385	AKAP7	6	C	C	G	23
ENPP3	5169	genome.wustl.edu	36	6	132037101	132037101	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	132037101	132037101	ENPP3	6	G	G	A	47
CLGN	1047	genome.wustl.edu	36	4	141531248	141531248	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	141531248	141531248	CLGN	4	G	G	A	33
HIVEP2	3097	genome.wustl.edu	36	6	143132492	143132492	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	143132492	143132492	HIVEP2	6	G	G	C	33
IVL	3713	genome.wustl.edu	36	1	151149202	151149202	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	151149202	151149202	IVL	1	A	A	C	9
SCN9A	6335	genome.wustl.edu	36	2	166851301	166851301	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	166851301	166851301	SCN9A	2	T	T	A	60
ODZ2	57451	genome.wustl.edu	36	5	167574777	167574777	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	167574777	167574777	ODZ2	5	G	G	C	33
LRP2	4036	genome.wustl.edu	36	2	169697435	169697435	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	169697435	169697435	LRP2	2	C	C	G	29
ZNF354A	6940	genome.wustl.edu	36	5	178072355	178072355	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	178072355	178072355	ZNF354A	5	G	G	T	36
GLS	2744	genome.wustl.edu	36	2	191527599	191527599	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	191527599	191527599	GLS	2	C	C	G	32
CRB1	23418	genome.wustl.edu	36	1	195657676	195657676	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	195657676	195657676	CRB1	1	C	C	T	21
ETNK2	55224	genome.wustl.edu	36	1	202383259	202383259	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	202383259	202383259	ETNK2	1	G	G	T	48
FAM183A	0	genome.wustl.edu	36	1	43389041	43389041	+	Silent	SNP	C	C	G		Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	C	G	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	43389041	43389041	FAM183A	1	C	C	G	21
PC	5091	genome.wustl.edu	36	11	66375126	66375126	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	66375126	66375126	PC	11	T	T	C	56
PDE2A	5138	genome.wustl.edu	36	11	71977887	71977887	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	71977887	71977887	PDE2A	11	G	G	T	47
OTOP2	92736	genome.wustl.edu	36	17	70441188	70441188	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70441188	70441188	OTOP2	17	C	T	T	23
AP1M1	8907	genome.wustl.edu	36	19	16206060	16206060	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1362-01	TCGA-04-1362-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	16206060	16206060	AP1M1	19	G	G	C	43
CNNM3	26505	genome.wustl.edu	36	2	96854663	96854663	+	Missense_Mutation	SNP	A	A	G		Unknown	TCGA-04-1362-01	TCGA-04-1362-10	A	A	A	G	A	A	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	96854663	96854663	CNNM3	2	A	A	G	14
TDP1	55775	genome.wustl.edu	36	14	89499549	89499552	+	Frame_Shift_Del	DEL	AGAA	AGAA	-		Unknown	TCGA-04-1362-01	TCGA-04-1362-10	AGAA	AGAA	AGAA	-	AGAA	AGAA	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	89499549	89499552	TDP1	14	AGAA	AGAA	-	11
JUP	3728	genome.wustl.edu	36	17	37165966	37165968	+	In_Frame_Del	DEL	CTC	CTC	-		Unknown	TCGA-04-1362-01	TCGA-04-1362-10	CTC	CTC	CTC	-	CTC	CTC	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	37165966	37165968	JUP	17	CTC	CTC	-	28
SCRN2	90507	genome.wustl.edu	36	17	43270947	43270947	+	Missense_Mutation	SNP	T	T	A		Unknown	TCGA-04-1362-01	TCGA-04-1362-10	T	T	T	A	T	T	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	43270947	43270947	SCRN2	17	T	T	A	50