Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
ABCD2	225	hgsc.bcm.edu	36	12	38284054	38284054	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	38284054	38284054	ABCD2	12	T	T	C	59
ADAMTS12	81792	hgsc.bcm.edu	36	5	33631905	33631905	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	33631905	33631905	ADAMTS12	5	C	C	T	25
ADAMTS20	80070	hgsc.bcm.edu	36	12	42182410	42182421	+	In_Frame_Del	DEL	CATTAAGATCTT	CATTAAGATCTT	-	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	CATTAAGATCTT	CATTAAGATCTT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Del	DEL	42182410	42182421	ADAMTS20	12	CATTAAGATCTT	CATTAAGATCTT	-	17
AFTPH	54812	hgsc.bcm.edu	36	2	64632389	64632389	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	64632389	64632389	AFTPH	2	A	A	G	6
ATF6	22926	hgsc.bcm.edu	36	1	160088224	160088224	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	160088224	160088224	ATF6	1	C	C	G	24
ATP13A5	344905	hgsc.bcm.edu	36	3	194579201	194579201	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	194579201	194579201	ATP13A5	3	T	T	C	54
AWAT1	158833	hgsc.bcm.edu	36	X	69376481	69376481	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	69376481	69376481	AWAT1	23	G	G	A	46
C5orf33	133686	hgsc.bcm.edu	36	5	36255475	36255477	+	In_Frame_Del	DEL	CTT	CTT	-	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	CTT	CTT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Del	DEL	36255475	36255477	C5orf33	5	CTT	CTT	-	20
C5orf33	133686	hgsc.bcm.edu	36	5	36255477	36255477	+	Nonsense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	36255477	36255477	C5orf33	5	T	T	A	62
CCDC18	343099	hgsc.bcm.edu	36	1	93453031	93453031	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	93453031	93453031	CCDC18	1	G	G	A	42
CCT5	22948	hgsc.bcm.edu	36	5	10315704	10315704	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	10315704	10315704	CCT5	5	C	C	G	24
CD3EAP	10849	hgsc.bcm.edu	36	19	50604020	50604020	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	50604020	50604020	CD3EAP	19	G	G	A	47
CDH7	1005	hgsc.bcm.edu	36	18	61678026	61678034	+	In_Frame_Del	DEL	TTGAAAGAT	TTGAAAGAT	-	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	TTGAAAGAT	TTGAAAGAT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Del	DEL	61678026	61678034	CDH7	18	TTGAAAGAT	TTGAAAGAT	-	52
CELSR3	1951	hgsc.bcm.edu	36	3	48655322	48655322	+	Splice_Site_SNP	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Splice_Site_SNP	SNP	48655322	48655322	CELSR3	3	C	C	T	24
CHMP2B	25978	hgsc.bcm.edu	36	3	87377619	87377619	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	87377619	87377619	CHMP2B	3	A	A	G	2
COL11A1	1301	hgsc.bcm.edu	36	1	103260930	103260930	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	103260930	103260930	COL11A1	1	A	A	C	4
DDOST	1650	hgsc.bcm.edu	36	1	20854540	20854540	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	20854540	20854540	DDOST	1	G	G	A	47
DNAJC10	54431	hgsc.bcm.edu	36	2	183301929	183301929	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	183301929	183301929	DNAJC10	2	A	A	G	2
DTNB	1838	hgsc.bcm.edu	36	2	25531819	25531819	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	25531819	25531819	DTNB	2	C	C	A	27
DUSP13	51207	hgsc.bcm.edu	36	10	76533781	76533781	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	76533781	76533781	DUSP13	10	C	C	T	21
EXD2	55218	hgsc.bcm.edu	36	14	68765378	68765378	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	68765378	68765378	EXD2	14	C	C	G	32
FCRL4	83417	hgsc.bcm.edu	36	1	155825629	155825629	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	155825629	155825629	FCRL4	1	A	A	C	11
FSCN3	29999	hgsc.bcm.edu	36	7	127022763	127022763	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	127022763	127022763	FSCN3	7	A	A	T	3
GDPD3	79153	hgsc.bcm.edu	36	16	30027203	30027203	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	30027203	30027203	GDPD3	16	A	A	T	1
GNL2	29889	hgsc.bcm.edu	36	1	37833980	37833980	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	37833980	37833980	GNL2	1	T	T	G	59
HHAT	55733	hgsc.bcm.edu	36	1	208627520	208627520	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	208627520	208627520	HHAT	1	C	C	G	32
HIST4H4	121504	hgsc.bcm.edu	36	12	14815177	14815177	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	14815177	14815177	HIST4H4	12	G	G	A	39
HOXD10	3236	hgsc.bcm.edu	36	2	176692084	176692084	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	176692084	176692084	HOXD10	2	A	A	C	3
HOXD10	3236	hgsc.bcm.edu	36	2	176692088	176692088	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	176692088	176692088	HOXD10	2	C	C	T	27
IL17F	112744	hgsc.bcm.edu	36	6	52209902	52209902	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	52209902	52209902	IL17F	6	T	T	A	57
ITIH4	3700	hgsc.bcm.edu	36	3	52823078	52823078	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	52823078	52823078	ITIH4	3	G	G	A	40
KCNQ2	3785	hgsc.bcm.edu	36	20	61541487	61541487	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	61541487	61541487	KCNQ2	20	C	C	T	21
KNDC1	85442	hgsc.bcm.edu	36	10	134870381	134870381	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	134870381	134870381	KNDC1	10	G	G	T	45
LRP1B	53353	hgsc.bcm.edu	36	2	141176527	141176527	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	141176527	141176527	LRP1B	2	T	T	C	54
MIA3	375056	hgsc.bcm.edu	36	1	220869082	220869082	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	220869082	220869082	MIA3	1	T	T	C	54
MS4A14	84689	hgsc.bcm.edu	36	11	59927101	59927101	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	59927101	59927101	MS4A14	11	T	T	C	54
NOBOX	135935	hgsc.bcm.edu	36	7	143729244	143729244	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	143729244	143729244	NOBOX	7	G	G	C	36
PIK3R4	30849	hgsc.bcm.edu	36	3	131905315	131905315	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	131905315	131905315	PIK3R4	3	C	C	A	29
PLAUR	5329	hgsc.bcm.edu	36	19	48851563	48851563	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	48851563	48851563	PLAUR	19	G	G	A	38
PRDM2	7799	hgsc.bcm.edu	36	1	13979571	13979571	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	13979571	13979571	PRDM2	1	C	C	T	25
SMARCB1	6598	hgsc.bcm.edu	36	22	22505875	22505875	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	22505875	22505875	SMARCB1	22	A	A	G	7
SYNE2	23224	hgsc.bcm.edu	36	14	63586233	63586234	+	Frame_Shift_Ins	INS	-	-	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	63586233	63586234	SYNE2	14	-	-	T	20
TIGD6	81789	hgsc.bcm.edu	36	5	149355073	149355073	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	149355073	149355073	TIGD6	5	T	T	C	56
TMEM131	23505	hgsc.bcm.edu	36	2	97780348	97780348	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	97780348	97780348	TMEM131	2	G	G	A	35
TMPRSS11D	9407	hgsc.bcm.edu	36	4	68375829	68375829	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	68375829	68375829	TMPRSS11D	4	A	A	T	11
TMPRSS11F	389208	hgsc.bcm.edu	36	4	68647321	68647321	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	68647321	68647321	TMPRSS11F	4	T	T	A	59
TP53	7157	hgsc.bcm.edu	36	17	7519179	7519179	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Biotage_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	7519179	7519179	TP53	17	G	G	A	42
TP53BP1	7158	hgsc.bcm.edu	36	15	41558900	41558900	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	41558900	41558900	TP53BP1	15	G	G	A	41
TRDMT1	1787	hgsc.bcm.edu	36	10	17241230	17241230	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	17241230	17241230	TRDMT1	10	C	C	A	26
TRIM54	57159	hgsc.bcm.edu	36	2	27375038	27375038	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	27375038	27375038	TRIM54	2	C	C	T	17
TRRAP	8295	hgsc.bcm.edu	36	7	98414417	98414417	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	98414417	98414417	TRRAP	7	C	C	T	26
UBR5	51366	hgsc.bcm.edu	36	8	103392901	103392901	+	Splice_Site_SNP	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Splice_Site_SNP	SNP	103392901	103392901	UBR5	8	C	C	T	24
USP22	23326	hgsc.bcm.edu	36	17	20855138	20855139	+	Frame_Shift_Del	DEL	GG	GG	-	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	GG	GG	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	20855138	20855139	USP22	17	GG	GG	-	35
USP22	23326	hgsc.bcm.edu	36	17	20855141	20855141	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	20855141	20855141	USP22	17	G	G	A	42
XPNPEP1	7511	hgsc.bcm.edu	36	10	111620539	111620539	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	111620539	111620539	XPNPEP1	10	C	C	A	23
ZFYVE1	53349	hgsc.bcm.edu	36	14	72512089	72512089	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	72512089	72512089	ZFYVE1	14	C	C	A	21
ZNF222	7673	hgsc.bcm.edu	36	19	49228433	49228433	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	49228433	49228433	ZNF222	19	C	C	T	26
ZNF821	55565	hgsc.bcm.edu	36	16	70452024	70452024	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0720-01	TCGA-13-0720-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	70452024	70452024	ZNF821	16	C	C	G	29