Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
LOC730074	730074	genome.wustl.edu	36	6	184806	184806	+	Missense_Mutation	SNP	A	G	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	G	G	G	G	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	184806	184806	LOC730074	6	A	G	G	7
TPO	7173	genome.wustl.edu	36	2	1486840	1486840	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1486840	1486840	TPO	2	G	G	A	37
PLIN4	729359	genome.wustl.edu	36	19	4462818	4462818	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	4462818	4462818	PLIN4	19	A	A	G	6
TP53	7157	genome.wustl.edu	36	17	7519128	7519128	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7519128	7519128	TP53	17	C	C	T	25
COL5A3	50509	genome.wustl.edu	36	19	9946074	9946074	+	Missense_Mutation	SNP	C	G	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	G	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	9946074	9946074	COL5A3	19	C	G	G	22
FGD5	152273	genome.wustl.edu	36	3	14935265	14935265	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	14935265	14935265	FGD5	3	G	G	A	44
PTER	9317	genome.wustl.edu	36	10	16568623	16568623	+	Splice_Site_SNP	SNP	G	G	C	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	16568623	16568623	PTER	10	G	G	C	44
RBM24	221662	genome.wustl.edu	36	6	17392921	17392921	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	17392921	17392921	RBM24	6	G	G	A	43
IL25	64806	genome.wustl.edu	36	14	22914673	22914673	+	Splice_Site_SNP	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	22914673	22914673	IL25	14	G	G	A	35
FLJ40504	284085	genome.wustl.edu	36	17	23628148	23628148	+	Nonsense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	23628148	23628148	FLJ40504	17	C	A	A	30
KIAA0319	9856	genome.wustl.edu	36	6	24684575	24684575	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	24684575	24684575	KIAA0319	6	C	C	G	24
EFCAB6	64800	genome.wustl.edu	36	22	42353774	42353774	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	42353774	42353774	EFCAB6	22	C	T	T	27
SRF	6722	genome.wustl.edu	36	6	43252280	43252280	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	43252280	43252280	SRF	6	G	G	T	34
SETD2	29072	genome.wustl.edu	36	3	47114495	47114495	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	47114495	47114495	SETD2	3	G	G	A	46
NR1H3	10062	genome.wustl.edu	36	11	47246815	47246815	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	47246815	47246815	NR1H3	11	C	T	T	25
ATP8B4	79895	genome.wustl.edu	36	15	48052207	48052207	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	48052207	48052207	ATP8B4	15	T	T	A	63
ESYT1	23344	genome.wustl.edu	36	12	54814394	54814394	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	54814394	54814394	ESYT1	12	C	C	G	28
MS4A7	58475	genome.wustl.edu	36	11	59917859	59917859	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	59917859	59917859	MS4A7	11	A	A	T	6
DDB1	1642	genome.wustl.edu	36	11	60835831	60835832	+	Missense	DNP	CC	CC	AA	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	CC	CC	CC	AA	CC	CC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	60835831	60835832	DDB1	11	CC	CC	AA	18
LGALS12	85329	genome.wustl.edu	36	11	63039744	63039744	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	63039744	63039744	LGALS12	11	C	C	T	22
CILP	8483	genome.wustl.edu	36	15	63277186	63277186	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	63277186	63277186	CILP	15	C	C	G	30
FAM123B	139285	genome.wustl.edu	36	X	63329595	63329595	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	63329595	63329595	FAM123B	23	C	C	A	29
COL19A1	1310	genome.wustl.edu	36	6	70938599	70938599	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70938599	70938599	COL19A1	6	T	T	G	63
KIAA0913	23053	genome.wustl.edu	36	10	75227656	75227656	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	75227656	75227656	KIAA0913	10	G	G	T	43
ENSG00000215028		genome.wustl.edu	36	8	79836611	79836611	+	Splice_Site_SNP	SNP	C	C	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	79836611	79836611	ENSG00000215028	8	C	C	G	24
KIAA1009	22832	genome.wustl.edu	36	6	84961443	84961443	+	Nonsense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	84961443	84961443	KIAA1009	6	G	G	C	45
TMEM126A	84233	genome.wustl.edu	36	11	85044369	85044369	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	85044369	85044369	TMEM126A	11	G	G	A	42
SFTPB	6439	genome.wustl.edu	36	2	85746307	85746307	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	85746307	85746307	SFTPB	2	A	A	C	7
CEP290	80184	genome.wustl.edu	36	12	87029169	87029169	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	87029169	87029169	CEP290	12	C	C	A	28
FOLH1B	219595	genome.wustl.edu	36	11	89069480	89069480	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	89069480	89069480	FOLH1B	11	C	C	A	20
PTCH1	5727	genome.wustl.edu	36	9	97260321	97260321	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	97260321	97260321	PTCH1	9	A	A	T	6
ARPC1A	10552	genome.wustl.edu	36	7	98779896	98779896	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	98779896	98779896	ARPC1A	7	G	A	A	42
TMTC4	84899	genome.wustl.edu	36	13	100085302	100085302	+	Missense_Mutation	SNP	G	C	C	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	C	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	100085302	100085302	TMTC4	13	G	C	C	35
MCART6	401612	genome.wustl.edu	36	X	103236210	103236210	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	A	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	103236210	103236210	MCART6	23	G	G	A	39
RINT1	60561	genome.wustl.edu	36	7	104970272	104970272	+	Missense_Mutation	SNP	T	C	C	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	T	T	C	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	104970272	104970272	RINT1	7	T	C	C	52
C1orf59	113802	genome.wustl.edu	36	1	109001645	109001645	+	Missense_Mutation	SNP	T	T	A	rs11540221	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	109001645	109001645	C1orf59	1	T	T	A	55
HIPK1	204851	genome.wustl.edu	36	1	114285144	114285144	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	114285144	114285144	HIPK1	1	A	A	G	13
DSCAML1	57453	genome.wustl.edu	36	11	117156448	117156448	+	Missense_Mutation	SNP	T	A	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	T	T	A	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	117156448	117156448	DSCAML1	11	T	A	A	50
POLQ	10721	genome.wustl.edu	36	3	122669059	122669059	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	122669059	122669059	POLQ	3	G	G	C	43
PLXNA4	91584	genome.wustl.edu	36	7	131481867	131481867	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	131481867	131481867	PLXNA4	7	C	C	T	22
TMEM71	137835	genome.wustl.edu	36	8	133809389	133809389	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	133809389	133809389	TMEM71	8	C	C	G	29
C9orf171		genome.wustl.edu	36	9	134437680	134437680	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	134437680	134437680	C9orf171	9	C	C	A	21
ETF1	2107	genome.wustl.edu	36	5	137881173	137881173	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	137881173	137881173	ETF1	5	C	C	G	17
MLL3	58508	genome.wustl.edu	36	7	151482376	151482376	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	151482376	151482376	MLL3	7	G	G	A	46
ZNF275	10838	genome.wustl.edu	36	X	152265671	152265671	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	152265671	152265671	ZNF275	23	C	C	A	28
VHLL	391104	genome.wustl.edu	36	1	154535367	154535367	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	154535367	154535367	VHLL	1	A	A	C	15
VEPH1	79674	genome.wustl.edu	36	3	158614419	158614419	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	158614419	158614419	VEPH1	3	G	G	A	43
NUF2	83540	genome.wustl.edu	36	1	161585425	161585425	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	161585425	161585425	NUF2	1	A	A	T	1
TTC21B	79809	genome.wustl.edu	36	2	166478345	166478345	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	166478345	166478345	TTC21B	2	G	G	T	48
TTN	7273	genome.wustl.edu	36	2	179351902	179351902	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	179351902	179351902	TTN	2	A	A	G	7
DNAH7	56171	genome.wustl.edu	36	2	196457735	196457735	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	196457735	196457735	DNAH7	2	C	C	A	17
SRGAP2	23380	genome.wustl.edu	36	1	204633631	204633631	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	204633631	204633631	SRGAP2	1	A	A	G	8
DEPDC5	9681	genome.wustl.edu	36	22	30532135	30532159	+	Frame_Shift_Del	DEL	TTGTAATAGTTTCACCCCACGAATA	TTGTAATAGTTTCACCCCACGAATA	-	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	TTGTAATAGTTTCACCCCACGAATA	TTGTAATAGTTTCACCCCACGAATA	TTGTAATAGTTTCACCCCACGAATA	-	TTGTAATAGTTTCACCCCACGAATA	TTGTAATAGTTTCACCCCACGAATA	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	30532135	30532159	DEPDC5	22	TTGTAATAGTTTCACCCCACGAATA	TTGTAATAGTTTCACCCCACGAATA	-	64
CCDC40	55036	genome.wustl.edu	36	17	75646936	75646950	+	In_Frame_Del	DEL	ACATGCAGAACATCG	ACATGCAGAACATCG	-	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	ACATGCAGAACATCG	ACATGCAGAACATCG	ACATGCAGAACATCG	-	ACATGCAGAACATCG	ACATGCAGAACATCG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	75646936	75646950	CCDC40	17	ACATGCAGAACATCG	ACATGCAGAACATCG	-	14
METTL8	79828	genome.wustl.edu	36	2	171904158	171904160	+	In_Frame_Del	DEL	ATG	ATG	-	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	ATG	ATG	ATG	-	ATG	ATG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	171904158	171904160	METTL8	2	ATG	ATG	-	8
FAAH	2166	genome.wustl.edu	36	1	46644044	46644044	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	46644044	46644044	FAAH	1	A	A	G	2
JAK3	3718	genome.wustl.edu	36	19	17807849	17807849	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	17807849	17807849	JAK3	19	G	G	A	46
CARD10	29775	genome.wustl.edu	36	22	36223101	36223101	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-13-1404-01	TCGA-13-1404-10	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	36223101	36223101	CARD10	22	G	A	A	42