Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
ACTN2	88	hgsc.bcm.edu	36	1	234985044	234985044	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	234985044	234985044	ACTN2	1	G	G	A	37
ANKRD12	23253	hgsc.bcm.edu	36	18	9245224	9245224	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	9245224	9245224	ANKRD12	18	T	T	C	49
C14orf28	122525	hgsc.bcm.edu	36	14	44443399	44443399	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	44443399	44443399	C14orf28	14	C	C	A	22
C1QTNF7	114905	hgsc.bcm.edu	36	4	15046606	15046606	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	15046606	15046606	C1QTNF7	4	A	A	G	11
CASP1	834	hgsc.bcm.edu	36	11	104405082	104405082	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	104405082	104405082	CASP1	11	C	C	T	27
CCT6B	10693	hgsc.bcm.edu	36	17	30303122	30303122	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	30303122	30303122	CCT6B	17	C	C	G	32
COL7A1	1294	hgsc.bcm.edu	36	3	48580956	48580956	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	48580956	48580956	COL7A1	3	C	C	T	28
CPXCR1	53336	hgsc.bcm.edu	36	X	87895124	87895124	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	87895124	87895124	CPXCR1	23	A	A	T	4
CXorf21	80231	hgsc.bcm.edu	36	X	30487936	30487936	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	30487936	30487936	CXorf21	23	C	C	T	26
CYP8B1	1582	hgsc.bcm.edu	36	3	42891319	42891319	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	42891319	42891319	CYP8B1	3	C	C	T	23
DAG1	1605	hgsc.bcm.edu	36	3	49543630	49543630	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	49543630	49543630	DAG1	3	G	G	T	36
DIP2B	57609	hgsc.bcm.edu	36	12	49360789	49360789	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	49360789	49360789	DIP2B	12	A	A	T	2
DNAH2	146754	hgsc.bcm.edu	36	17	7577230	7577230	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	7577230	7577230	DNAH2	17	A	A	T	16
ESPL1	9700	hgsc.bcm.edu	36	12	51950046	51950046	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	51950046	51950046	ESPL1	12	C	C	T	21
FAM59A	64762	hgsc.bcm.edu	36	18	28120994	28120994	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	28120994	28120994	FAM59A	18	C	C	G	28
FRMD1	79981	hgsc.bcm.edu	36	6	168207252	168207252	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	168207252	168207252	FRMD1	6	G	G	A	39
HIST1H1T	3010	hgsc.bcm.edu	36	6	26215997	26215997	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	26215997	26215997	HIST1H1T	6	C	C	G	22
KIAA2018	205717	hgsc.bcm.edu	36	3	114860172	114860172	+	Frame_Shift_Del	DEL	T	T	-	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	114860172	114860172	KIAA2018	3	T	T	-	60
MAN2B1	4125	hgsc.bcm.edu	36	19	12635554	12635554	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	12635554	12635554	MAN2B1	19	G	G	A	46
MASTL	84930	hgsc.bcm.edu	36	10	27499593	27499593	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	27499593	27499593	MASTL	10	A	A	G	16
MMP16	4325	hgsc.bcm.edu	36	8	89198034	89198034	+	Nonsense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	89198034	89198034	MMP16	8	T	T	A	56
MOSPD3	64598	hgsc.bcm.edu	36	7	100049137	100049137	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	100049137	100049137	MOSPD3	7	G	G	A	38
NES	10763	hgsc.bcm.edu	36	1	154908577	154908577	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	154908577	154908577	NES	1	T	T	C	54
OLFML1	283298	hgsc.bcm.edu	36	11	7466019	7466019	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	7466019	7466019	OLFML1	11	G	G	T	41
PBX2	5089	hgsc.bcm.edu	36	6	32264543	32264543	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	32264543	32264543	PBX2	6	G	G	A	42
PCNXL3	399909	hgsc.bcm.edu	36	11	65146302	65146302	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	65146302	65146302	PCNXL3	11	T	T	C	55
PPFIA2	8499	hgsc.bcm.edu	36	12	80257111	80257111	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	80257111	80257111	PPFIA2	12	T	T	C	64
PRPSAP1	5635	hgsc.bcm.edu	36	17	71820648	71820648	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	71820648	71820648	PRPSAP1	17	C	C	T	32
PRR4	11272	hgsc.bcm.edu	36	12	10891057	10891057	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	10891057	10891057	PRR4	12	G	G	A	40
PTCH1	5727	hgsc.bcm.edu	36	9	97258487	97258487	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	97258487	97258487	PTCH1	9	C	C	T	28
RANBP6	26953	hgsc.bcm.edu	36	9	6004121	6004123	+	In_Frame_Del	DEL	TTT	TTT	-	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	TTT	TTT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Del	DEL	6004121	6004123	RANBP6	9	TTT	TTT	-	52
RBM12B	389677	hgsc.bcm.edu	36	8	94815710	94815710	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	94815710	94815710	RBM12B	8	G	G	A	43
RHOT1	55288	hgsc.bcm.edu	36	17	27550123	27550123	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	27550123	27550123	RHOT1	17	C	C	T	25
SESN2	83667	hgsc.bcm.edu	36	1	28471771	28471771	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	28471771	28471771	SESN2	1	C	C	T	31
SIGLEC11	114132	hgsc.bcm.edu	36	19	55153779	55153779	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	55153779	55153779	SIGLEC11	19	T	T	G	54
SLC28A1	9154	hgsc.bcm.edu	36	15	83248464	83248464	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	83248464	83248464	SLC28A1	15	T	T	A	50
SLFN11	91607	hgsc.bcm.edu	36	17	30704004	30704004	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	30704004	30704004	SLFN11	17	T	T	A	53
SMPDL3B	27293	hgsc.bcm.edu	36	1	28155060	28155060	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	28155060	28155060	SMPDL3B	1	C	C	T	27
SMYD1	150572	hgsc.bcm.edu	36	2	88168571	88168571	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	88168571	88168571	SMYD1	2	C	C	T	19
SOS1	6654	hgsc.bcm.edu	36	2	39066517	39066517	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	39066517	39066517	SOS1	2	G	G	C	47
TMEM185A	84548	hgsc.bcm.edu	36	X	148498255	148498255	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	148498255	148498255	TMEM185A	23	A	A	T	11
TMEM37	140738	hgsc.bcm.edu	36	2	119911121	119911122	+	In_Frame_Ins	INS	-	-	GTGTGC	rs3217464	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	119911121	119911122	TMEM37	2	-	-	GTGTGC	10
TP53	7157	hgsc.bcm.edu	36	17	7520087	7520088	+	Frame_Shift_Ins	INS	-	-	ACCGT	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	7520087	7520088	TP53	17	-	-	ACCGT	1
TRH	7200	hgsc.bcm.edu	36	3	131178462	131178462	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	131178462	131178462	TRH	3	G	G	T	48
VN1R5	317705	hgsc.bcm.edu	36	1	245486650	245486650	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	245486650	245486650	VN1R5	1	C	C	T	17
ZNF789	285989	hgsc.bcm.edu	36	7	98919686	98919686	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1024-01	TCGA-23-1024-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	98919686	98919686	ZNF789	7	C	C	T	23