Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
ABCF1	23	hgsc.bcm.edu	36	6	30666446	30666446	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	30666446	30666446	ABCF1	6	C	C	T	26
ACTR8	93973	hgsc.bcm.edu	36	3	53879207	53879207	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	53879207	53879207	ACTR8	3	C	C	G	29
ADAMTSL2	9719	hgsc.bcm.edu	36	9	135395654	135395655	+	Frame_Shift_Ins	INS	-	-	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	135395654	135395655	ADAMTSL2	9	-	-	T	24
ADCY7	113	hgsc.bcm.edu	36	16	48898514	48898515	+	In_Frame_Ins	INS	-	-	GTG	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	48898514	48898515	ADCY7	16	-	-	GTG	55
ADH4	127	hgsc.bcm.edu	36	4	100282913	100282913	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	100282913	100282913	ADH4	4	C	C	A	28
AFF2	2334	hgsc.bcm.edu	36	X	147856866	147856866	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	147856866	147856866	AFF2	23	G	G	T	45
AHNAK2	113146	hgsc.bcm.edu	36	14	104484364	104484365	+	Frame_Shift_Del	DEL	GA	GA	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	GA	GA	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	104484364	104484365	AHNAK2	14	GA	GA	-	37
ALOX15B	247	hgsc.bcm.edu	36	17	7883226	7883226	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	7883226	7883226	ALOX15B	17	A	A	C	6
ANXA11	311	hgsc.bcm.edu	36	10	81920593	81920593	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	81920593	81920593	ANXA11	10	C	C	A	26
AP2A2	161	hgsc.bcm.edu	36	11	983375	983375	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	983375	983375	AP2A2	11	G	G	A	33
AQP7	364	hgsc.bcm.edu	36	9	33376989	33376989	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	33376989	33376989	AQP7	9	C	C	G	25
ARFGAP2	84364	hgsc.bcm.edu	36	11	47154032	47154032	+	Frame_Shift_Del	DEL	G	G	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	47154032	47154032	ARFGAP2	11	G	G	-	47
ARHGEF15	22899	hgsc.bcm.edu	36	17	8159931	8159932	+	In_Frame_Ins	INS	-	-	ATT	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	8159931	8159932	ARHGEF15	17	-	-	ATT	41
ARHGEF18	23370	hgsc.bcm.edu	36	19	7424482	7424482	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	7424482	7424482	ARHGEF18	19	A	A	T	10
ASPH	444	hgsc.bcm.edu	36	8	62713068	62713068	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	62713068	62713068	ASPH	8	A	A	G	4
ATP2B2	491	hgsc.bcm.edu	36	3	10376757	10376757	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	10376757	10376757	ATP2B2	3	C	C	G	20
AVIL	10677	hgsc.bcm.edu	36	12	56487699	56487699	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	56487699	56487699	AVIL	12	G	G	T	33
AXIN2	8313	hgsc.bcm.edu	36	17	60984833	60984833	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	60984833	60984833	AXIN2	17	T	T	G	56
BLOC1S3	388552	hgsc.bcm.edu	36	19	50374977	50374977	+	Frame_Shift_Del	DEL	G	G	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	50374977	50374977	BLOC1S3	19	G	G	-	45
BMPR2	659	hgsc.bcm.edu	36	2	203128907	203128907	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	203128907	203128907	BMPR2	2	G	G	A	46
BNC1	646	hgsc.bcm.edu	36	15	81723599	81723599	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	81723599	81723599	BNC1	15	G	G	T	43
BPIL2	254240	hgsc.bcm.edu	36	22	31145387	31145387	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	31145387	31145387	BPIL2	22	G	G	A	39
BRCA2	675	hgsc.bcm.edu	36	13	31870481	31870481	+	Frame_Shift_Del	DEL	G	G	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	31870481	31870481	BRCA2	13	G	G	-	46
FAM69C	125704	hgsc.bcm.edu	36	18	70254717	70254717	+	Frame_Shift_Del	DEL	T	T	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	70254717	70254717	FAM69C	18	T	T	-	53
C6orf132	647024	hgsc.bcm.edu	36	6	42218142	42218142	+	Frame_Shift_Del	DEL	C	C	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	42218142	42218142	C6orf132	6	C	C	-	18
C9orf96	169436	hgsc.bcm.edu	36	9	135255432	135255433	+	Frame_Shift_Ins	INS	-	-	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	135255432	135255433	C9orf96	9	-	-	C	51
CASP2	835	hgsc.bcm.edu	36	7	142695699	142695699	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	142695699	142695699	CASP2	7	C	C	T	30
CASP9	842	hgsc.bcm.edu	36	1	15703827	15703827	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	15703827	15703827	CASP9	1	T	T	G	55
CCDC155	147872	hgsc.bcm.edu	36	19	54589629	54589629	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	54589629	54589629	CCDC155	19	C	C	T	28
CCDC88A	55704	hgsc.bcm.edu	36	2	55499508	55499508	+	Frame_Shift_Del	DEL	C	C	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	55499508	55499508	CCDC88A	2	C	C	-	29
CD97	976	hgsc.bcm.edu	36	19	14378910	14378910	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	14378910	14378910	CD97	19	T	T	C	60
CETN1	1068	hgsc.bcm.edu	36	18	570475	570475	+	Frame_Shift_Del	DEL	C	C	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	570475	570475	CETN1	18	C	C	-	26
CHMP1B	57132	hgsc.bcm.edu	36	18	11841896	11841896	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	11841896	11841896	CHMP1B	18	C	C	T	19
CHMP4A	29082	hgsc.bcm.edu	36	14	23750470	23750470	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	23750470	23750470	CHMP4A	14	T	T	G	57
CHRNA2	1135	hgsc.bcm.edu	36	8	27383391	27383392	+	Frame_Shift_Ins	INS	-	-	GGGTGGA	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	27383391	27383392	CHRNA2	8	-	-	GGGTGGA	35
CNGB1	1258	hgsc.bcm.edu	36	16	56514685	56514685	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	56514685	56514685	CNGB1	16	C	C	A	30
COASY	80347	hgsc.bcm.edu	36	17	37969699	37969699	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	37969699	37969699	COASY	17	A	A	G	5
COL9A2	1298	hgsc.bcm.edu	36	1	40552478	40552479	+	Frame_Shift_Ins	INS	-	-	GA	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	40552478	40552479	COL9A2	1	-	-	GA	62
COMP	1311	hgsc.bcm.edu	36	19	18756048	18756048	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	18756048	18756048	COMP	19	C	C	G	20
CRLF1	9244	hgsc.bcm.edu	36	19	18568727	18568728	+	Frame_Shift_Del	DEL	CG	CG	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	CG	CG	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	18568727	18568728	CRLF1	19	CG	CG	-	31
CST9	128822	hgsc.bcm.edu	36	20	23532223	23532223	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	23532223	23532223	CST9	20	C	C	G	28
CYFIP1	23191	hgsc.bcm.edu	36	15	20544518	20544518	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	20544518	20544518	CYFIP1	15	G	G	C	34
DACH1	1602	hgsc.bcm.edu	36	13	71045086	71045086	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	71045086	71045086	DACH1	13	C	C	T	28
DDX21	9188	hgsc.bcm.edu	36	10	70393150	70393150	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	70393150	70393150	DDX21	10	G	G	A	41
DDX25	29118	hgsc.bcm.edu	36	11	125293764	125293765	+	In_Frame_Ins	INS	-	-	GAT	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	125293764	125293765	DDX25	11	-	-	GAT	11
DDX52	11056	hgsc.bcm.edu	36	17	33076288	33076288	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	33076288	33076288	DDX52	17	C	C	T	30
DIP2C	22982	hgsc.bcm.edu	36	10	381048	381048	+	Frame_Shift_Del	DEL	C	C	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	381048	381048	DIP2C	10	C	C	-	29
DLG5	9231	hgsc.bcm.edu	36	10	79265600	79265600	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	79265600	79265600	DLG5	10	C	C	A	28
DNAH1	25981	hgsc.bcm.edu	36	3	52379212	52379214	+	In_Frame_Del	DEL	CAA	CAA	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	CAA	CAA	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Del	DEL	52379212	52379214	DNAH1	3	CAA	CAA	-	29
DNAH10	196385	hgsc.bcm.edu	36	12	122981851	122981851	+	Frame_Shift_Del	DEL	G	G	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	122981851	122981851	DNAH10	12	G	G	-	35
DNM1	1759	hgsc.bcm.edu	36	9	130050785	130050785	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	130050785	130050785	DNM1	9	A	A	G	8
DOM3Z	1797	hgsc.bcm.edu	36	6	32045656	32045656	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	32045656	32045656	DOM3Z	6	G	G	T	43
DOM3Z	1797	hgsc.bcm.edu	36	6	32047258	32047258	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	32047258	32047258	DOM3Z	6	G	G	T	42
DPEP3	64180	hgsc.bcm.edu	36	16	66567359	66567360	+	Frame_Shift_Ins	INS	-	-	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	66567359	66567360	DPEP3	16	-	-	A	47
DRG2	1819	hgsc.bcm.edu	36	17	17944642	17944645	+	Frame_Shift_Del	DEL	CAGT	CAGT	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	CAGT	CAGT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	17944642	17944645	DRG2	17	CAGT	CAGT	-	17
DYSF	8291	hgsc.bcm.edu	36	2	71648854	71648854	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	71648854	71648854	DYSF	2	A	A	C	5
ECEL1	9427	hgsc.bcm.edu	36	2	233055839	233055840	+	Frame_Shift_Del	DEL	CT	CT	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	CT	CT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	233055839	233055840	ECEL1	2	CT	CT	-	20
ESPL1	9700	hgsc.bcm.edu	36	12	51950001	51950001	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	51950001	51950001	ESPL1	12	G	G	A	48
EXOSC10	5394	hgsc.bcm.edu	36	1	11063842	11063842	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	11063842	11063842	EXOSC10	1	T	T	G	59
FAM193B	54540	hgsc.bcm.edu	36	5	176896132	176896132	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	176896132	176896132	FAM193B	5	A	A	C	11
FOSB	2354	hgsc.bcm.edu	36	19	50667919	50667919	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	50667919	50667919	FOSB	19	C	C	T	24
FRMPD1	22844	hgsc.bcm.edu	36	9	37735493	37735494	+	Frame_Shift_Del	DEL	GT	GT	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	GT	GT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	37735493	37735494	FRMPD1	9	GT	GT	-	44
FYB	2533	hgsc.bcm.edu	36	5	39238125	39238125	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	39238125	39238125	FYB	5	C	C	G	24
GADD45B	4616	hgsc.bcm.edu	36	19	2428147	2428148	+	Frame_Shift_Ins	INS	-	-	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	2428147	2428148	GADD45B	19	-	-	G	31
GLG1	2734	hgsc.bcm.edu	36	16	73057104	73057104	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	73057104	73057104	GLG1	16	G	G	A	35
GLI1	2735	hgsc.bcm.edu	36	12	56152069	56152069	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	56152069	56152069	GLI1	12	A	A	T	12
GRIN3A	116443	hgsc.bcm.edu	36	9	103415524	103415524	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	103415524	103415524	GRIN3A	9	C	C	A	18
GSDMB	55876	hgsc.bcm.edu	36	17	35316761	35316761	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	35316761	35316761	GSDMB	17	C	C	A	30
GSG2	83903	hgsc.bcm.edu	36	17	3575560	3575560	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	3575560	3575560	GSG2	17	A	A	T	2
IQSEC2	23096	hgsc.bcm.edu	36	X	53296255	53296255	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	53296255	53296255	IQSEC2	23	T	T	G	58
IRF6	3664	hgsc.bcm.edu	36	1	208030735	208030735	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	208030735	208030735	IRF6	1	T	T	A	54
KAT2A	2648	hgsc.bcm.edu	36	17	37525829	37525829	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	37525829	37525829	KAT2A	17	G	G	C	45
KAZALD1	81621	hgsc.bcm.edu	36	10	102814032	102814032	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	102814032	102814032	KAZALD1	10	A	A	G	16
KCNA6	3742	hgsc.bcm.edu	36	12	4789756	4789757	+	Frame_Shift_Ins	INS	-	-	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	4789756	4789757	KCNA6	12	-	-	A	30
KCNA6	3742	hgsc.bcm.edu	36	12	4789939	4789940	+	Frame_Shift_Del	DEL	GC	GC	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	GC	GC	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	4789939	4789940	KCNA6	12	GC	GC	-	34
KCNJ12	3768	hgsc.bcm.edu	36	17	21259541	21259541	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	21259541	21259541	KCNJ12	17	C	C	T	31
KIAA1109	84162	hgsc.bcm.edu	36	4	123337348	123337348	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	123337348	123337348	KIAA1109	4	G	G	A	45
KIAA1632	57724	hgsc.bcm.edu	36	18	41750070	41750070	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	41750070	41750070	KIAA1632	18	C	C	G	32
KIAA1751	85452	hgsc.bcm.edu	36	1	1910196	1910197	+	In_Frame_Ins	INS	-	-	CCC	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	1910196	1910197	KIAA1751	1	-	-	CCC	58
SRRM4	84530	hgsc.bcm.edu	36	12	118067871	118067872	+	Frame_Shift_Ins	INS	-	-	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	118067871	118067872	SRRM4	12	-	-	C	5
KIT	3815	hgsc.bcm.edu	36	4	55219002	55219002	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	55219002	55219002	KIT	4	A	A	G	10
KRT77	374454	hgsc.bcm.edu	36	12	51383082	51383082	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	51383082	51383082	KRT77	12	C	C	G	26
LIMCH1	22998	hgsc.bcm.edu	36	4	41381272	41381272	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	41381272	41381272	LIMCH1	4	C	C	G	17
LIX1L	128077	hgsc.bcm.edu	36	1	144203726	144203726	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	144203726	144203726	LIX1L	1	T	T	A	56
LOXL3	84695	hgsc.bcm.edu	36	2	74616362	74616362	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	74616362	74616362	LOXL3	2	T	T	G	51
LSS	4047	hgsc.bcm.edu	36	21	46467066	46467066	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	46467066	46467066	LSS	21	A	A	T	5
MARK4	57787	hgsc.bcm.edu	36	19	50475515	50475515	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	50475515	50475515	MARK4	19	G	G	T	36
MAST3	23031	hgsc.bcm.edu	36	19	18093499	18093500	+	Frame_Shift_Ins	INS	-	-	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	18093499	18093500	MAST3	19	-	-	G	23
ME1	4199	hgsc.bcm.edu	36	6	84197329	84197329	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	84197329	84197329	ME1	6	G	G	T	43
METT11D1	64745	hgsc.bcm.edu	36	14	20528562	20528562	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	20528562	20528562	METT11D1	14	C	C	A	28
MGRN1	23295	hgsc.bcm.edu	36	16	4640454	4640455	+	Frame_Shift_Ins	INS	-	-	GCCG	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	4640454	4640455	MGRN1	16	-	-	GCCG	12
MGRN1	23295	hgsc.bcm.edu	36	16	4640457	4640457	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	4640457	4640457	MGRN1	16	T	T	A	55
MIA3	375056	hgsc.bcm.edu	36	1	220870005	220870005	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	220870005	220870005	MIA3	1	G	G	C	33
MOCS3	27304	hgsc.bcm.edu	36	20	49009312	49009312	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	49009312	49009312	MOCS3	20	G	G	T	44
MUC17	140453	hgsc.bcm.edu	36	7	100483021	100483021	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	100483021	100483021	MUC17	7	G	G	T	41
MUSK	4593	hgsc.bcm.edu	36	9	112499564	112499564	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	112499564	112499564	MUSK	9	G	G	C	45
MYH15	22989	hgsc.bcm.edu	36	3	109606965	109606965	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	109606965	109606965	MYH15	3	T	T	A	56
NARF	26502	hgsc.bcm.edu	36	17	78039282	78039283	+	Frame_Shift_Ins	INS	-	-	GA	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	78039282	78039283	NARF	17	-	-	GA	34
NBPF3	84224	hgsc.bcm.edu	36	1	21680843	21680843	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	21680843	21680843	NBPF3	1	G	G	A	40
NEFH	4744	hgsc.bcm.edu	36	22	28214873	28214873	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	28214873	28214873	NEFH	22	T	T	A	64
NEUROD1	4760	hgsc.bcm.edu	36	2	182251168	182251169	+	Frame_Shift_Ins	INS	-	-	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	182251168	182251169	NEUROD1	2	-	-	G	55
NOL9	79707	hgsc.bcm.edu	36	1	6516079	6516079	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	6516079	6516079	NOL9	1	A	A	T	9
NOTCH2	4853	hgsc.bcm.edu	36	1	120269944	120269944	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	120269944	120269944	NOTCH2	1	C	C	A	26
NSMCE2	286053	hgsc.bcm.edu	36	8	126439178	126439178	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	126439178	126439178	NSMCE2	8	A	A	T	6
OTOF	9381	hgsc.bcm.edu	36	2	26549844	26549845	+	In_Frame_Ins	INS	-	-	TCA	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	26549844	26549845	OTOF	2	-	-	TCA	20
OTOF	9381	hgsc.bcm.edu	36	2	26592844	26592844	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	26592844	26592844	OTOF	2	A	A	C	7
PCDH12	51294	hgsc.bcm.edu	36	5	141317324	141317324	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	141317324	141317324	PCDH12	5	C	C	G	30
PCDHGB4	8641	hgsc.bcm.edu	36	5	140748197	140748197	+	Frame_Shift_Del	DEL	G	G	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	140748197	140748197	PCDHGB4	5	G	G	-	47
PDCD2L	84306	hgsc.bcm.edu	36	19	39591949	39591949	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	39591949	39591949	PDCD2L	19	C	C	A	28
PDE12	201626	hgsc.bcm.edu	36	3	57517547	57517547	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	57517547	57517547	PDE12	3	A	A	T	11
PDE12	201626	hgsc.bcm.edu	36	3	57517550	57517550	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	57517550	57517550	PDE12	3	A	A	T	10
PDE12	201626	hgsc.bcm.edu	36	3	57517956	57517956	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	57517956	57517956	PDE12	3	A	A	C	15
PDE12	201626	hgsc.bcm.edu	36	3	57517958	57517958	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	57517958	57517958	PDE12	3	A	A	T	11
PGBD2	267002	hgsc.bcm.edu	36	1	247178401	247178401	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	247178401	247178401	PGBD2	1	T	T	C	49
PIK3R2	5296	hgsc.bcm.edu	36	19	18133834	18133835	+	Frame_Shift_Del	DEL	TT	TT	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	TT	TT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	18133834	18133835	PIK3R2	19	TT	TT	-	56
PKD1L1	168507	hgsc.bcm.edu	36	7	47871376	47871376	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	47871376	47871376	PKD1L1	7	A	A	G	2
PLCB3	5331	hgsc.bcm.edu	36	11	63790385	63790385	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	63790385	63790385	PLCB3	11	A	A	T	12
PRSS16	10279	hgsc.bcm.edu	36	6	27331044	27331058	+	In_Frame_Del	DEL	AAGGAGAGCCAGATT	AAGGAGAGCCAGATT	-	rs5030663	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	AAGGAGAGCCAGATT	AAGGAGAGCCAGATT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Del	DEL	27331044	27331058	PRSS16	6	AAGGAGAGCCAGATT	AAGGAGAGCCAGATT	-	1
PSMB6	5694	hgsc.bcm.edu	36	17	4648583	4648583	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	4648583	4648583	PSMB6	17	C	C	T	24
PSME1	5720	hgsc.bcm.edu	36	14	23676234	23676234	+	Frame_Shift_Del	DEL	G	G	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	23676234	23676234	PSME1	14	G	G	-	45
PTPN12	5782	hgsc.bcm.edu	36	7	77105966	77105966	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	77105966	77105966	PTPN12	7	A	A	G	2
RASA3	22821	hgsc.bcm.edu	36	13	113783234	113783235	+	In_Frame_Ins	INS	-	-	CTC	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	113783234	113783235	RASA3	13	-	-	CTC	33
RPS6KA2	6196	hgsc.bcm.edu	36	6	166747294	166747294	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	166747294	166747294	RPS6KA2	6	C	C	A	31
SCN11A	11280	hgsc.bcm.edu	36	3	38864043	38864043	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	38864043	38864043	SCN11A	3	T	T	A	49
SCRN1	9805	hgsc.bcm.edu	36	7	29950282	29950282	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	29950282	29950282	SCRN1	7	A	A	G	13
SCYL1	57410	hgsc.bcm.edu	36	11	65062051	65062051	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	65062051	65062051	SCYL1	11	A	A	G	11
SEC23IP	11196	hgsc.bcm.edu	36	10	121648144	121648144	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	121648144	121648144	SEC23IP	10	C	C	G	21
SH3TC2	79628	hgsc.bcm.edu	36	5	148364640	148364640	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	148364640	148364640	SH3TC2	5	C	C	T	29
SKIV2L	6499	hgsc.bcm.edu	36	6	32038740	32038740	+	Splice_Site_SNP	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Splice_Site_SNP	SNP	32038740	32038740	SKIV2L	6	G	G	A	34
SLC4A1	6521	hgsc.bcm.edu	36	17	39686139	39686139	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	39686139	39686139	SLC4A1	17	G	G	A	39
SLCO4A1	28231	hgsc.bcm.edu	36	20	60769848	60769848	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	60769848	60769848	SLCO4A1	20	T	T	A	54
SMYD4	114826	hgsc.bcm.edu	36	17	1631355	1631355	+	Missense_Mutation	SNP	G	G	T	rs58337165	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	1631355	1631355	SMYD4	17	G	G	T	43
SNED1	25992	hgsc.bcm.edu	36	2	241653476	241653479	+	Frame_Shift_Del	DEL	CAGG	CAGG	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	CAGG	CAGG	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	241653476	241653479	SNED1	2	CAGG	CAGG	-	21
SOX13	9580	hgsc.bcm.edu	36	1	202360506	202360506	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	202360506	202360506	SOX13	1	C	C	G	22
STXBP5L	9515	hgsc.bcm.edu	36	3	122111127	122111127	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	122111127	122111127	STXBP5L	3	T	T	C	61
SVEP1	79987	hgsc.bcm.edu	36	9	112252237	112252237	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	112252237	112252237	SVEP1	9	A	A	C	6
SYNE1	23345	hgsc.bcm.edu	36	6	152511016	152511017	+	Frame_Shift_Ins	INS	-	-	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	152511016	152511017	SYNE1	6	-	-	T	6
SYTL3	94120	hgsc.bcm.edu	36	6	159004303	159004303	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	159004303	159004303	SYTL3	6	A	A	G	15
TANC1	85461	hgsc.bcm.edu	36	2	159794866	159794866	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	159794866	159794866	TANC1	2	T	T	G	54
TBC1D21	161514	hgsc.bcm.edu	36	15	71964280	71964280	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	71964280	71964280	TBC1D21	15	A	A	T	7
TBX20	57057	hgsc.bcm.edu	36	7	35208707	35208707	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	35208707	35208707	TBX20	7	T	T	C	51
tcag7.1071	100130988	hgsc.bcm.edu	36	7	50151452	50151452	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	50151452	50151452	tcag7.1071	7	A	A	G	12
THADA	63892	hgsc.bcm.edu	36	2	43367627	43367627	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	43367627	43367627	THADA	2	T	T	C	55
TNPO2	30000	hgsc.bcm.edu	36	19	12686707	12686708	+	Frame_Shift_Ins	INS	-	-	CGTTG	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	12686707	12686708	TNPO2	19	-	-	CGTTG	54
TNS4	84951	hgsc.bcm.edu	36	17	35892141	35892142	+	Frame_Shift_Ins	INS	-	-	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	35892141	35892142	TNS4	17	-	-	T	24
TRIP10	9322	hgsc.bcm.edu	36	19	6701598	6701598	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	6701598	6701598	TRIP10	19	A	A	G	2
TRPV2	51393	hgsc.bcm.edu	36	17	16270900	16270900	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	16270900	16270900	TRPV2	17	A	A	T	7
TXNDC15	79770	hgsc.bcm.edu	36	5	134238105	134238105	+	Frame_Shift_Del	DEL	T	T	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	134238105	134238105	TXNDC15	5	T	T	-	58
SUN1	23353	hgsc.bcm.edu	36	7	861109	861109	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	861109	861109	SUN1	7	A	A	T	2
USP24	23358	hgsc.bcm.edu	36	1	55372611	55372611	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	55372611	55372611	USP24	1	G	G	C	34
VAV3	10451	hgsc.bcm.edu	36	1	108099623	108099623	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	108099623	108099623	VAV3	1	A	A	G	16
VWF	7450	hgsc.bcm.edu	36	12	5973307	5973308	+	Frame_Shift_Ins	INS	-	-	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	5973307	5973308	VWF	12	-	-	C	54
ZDHHC12	84885	hgsc.bcm.edu	36	9	130523446	130523447	+	Frame_Shift_Del	DEL	TT	TT	-	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	TT	TT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	130523446	130523447	ZDHHC12	9	TT	TT	-	52
ZNF148	7707	hgsc.bcm.edu	36	3	126434866	126434866	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	126434866	126434866	ZNF148	3	T	T	A	50
ZNF197	10168	hgsc.bcm.edu	36	3	44647583	44647583	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	44647583	44647583	ZNF197	3	A	A	T	10
ZNF395	55893	hgsc.bcm.edu	36	8	28262563	28262563	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	28262563	28262563	ZNF395	8	G	G	T	47
ZNF536	9745	hgsc.bcm.edu	36	19	35730977	35730977	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1120-01	TCGA-23-1120-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	35730977	35730977	ZNF536	19	G	G	C	43