Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
ANGEL1	23357	hgsc.bcm.edu	36	14	76342754	76342754	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	76342754	76342754	ANGEL1	14	G	G	A	48
CACNA1E	777	hgsc.bcm.edu	36	1	180007076	180007076	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	180007076	180007076	CACNA1E	1	G	G	A	37
CHD6	84181	hgsc.bcm.edu	36	20	39483980	39483980	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	39483980	39483980	CHD6	20	T	T	C	57
COL12A1	1303	hgsc.bcm.edu	36	6	75912586	75912586	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	75912586	75912586	COL12A1	6	G	G	A	33
COL12A1	1303	hgsc.bcm.edu	36	6	75912599	75912599	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	75912599	75912599	COL12A1	6	G	G	C	34
LCLAT1	253558	hgsc.bcm.edu	36	2	30716603	30716603	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	30716603	30716603	LCLAT1	2	C	C	T	23
MCM2	4171	hgsc.bcm.edu	36	3	128822333	128822333	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	454_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	128822333	128822333	MCM2	3	G	G	A	37
MYO3A	53904	hgsc.bcm.edu	36	10	26425327	26425327	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	26425327	26425327	MYO3A	10	A	A	G	4
MYOM3	127294	hgsc.bcm.edu	36	1	24306263	24306263	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	24306263	24306263	MYOM3	1	G	G	A	38
OR2T3	343173	hgsc.bcm.edu	36	1	246703816	246703817	+	Frame_Shift_Ins	INS	-	-	T	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Ins	INS	246703816	246703817	OR2T3	1	-	-	T	36
PDAP1	11333	hgsc.bcm.edu	36	7	98839005	98839005	+	Frame_Shift_Del	DEL	C	C	-	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	98839005	98839005	PDAP1	7	C	C	-	32
RALY	22913	hgsc.bcm.edu	36	20	32125080	32125080	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Nonsense_Mutation	SNP	32125080	32125080	RALY	20	A	A	T	11
SLC39A12	221074	hgsc.bcm.edu	36	10	18329722	18329722	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	18329722	18329722	SLC39A12	10	C	C	T	19
SLC4A8	9498	hgsc.bcm.edu	36	12	50175052	50175052	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Silent	SNP	50175052	50175052	SLC4A8	12	C	C	T	32
SMYD2	56950	hgsc.bcm.edu	36	1	212558104	212558104	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Silent	SNP	212558104	212558104	SMYD2	1	A	A	G	6
STMN4	81551	hgsc.bcm.edu	36	8	27153586	27153586	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	27153586	27153586	STMN4	8	G	G	A	38
TBC1D17	79735	hgsc.bcm.edu	36	19	55073581	55073582	+	In_Frame_Ins	INS	-	-	CTG	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	In_Frame_Ins	INS	55073581	55073582	TBC1D17	19	-	-	CTG	30
TOP2A	7153	hgsc.bcm.edu	36	17	35822725	35822726	+	Frame_Shift_Del	DEL	CT	CT	-	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	CT	CT	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Frame_Shift_Del	DEL	35822725	35822726	TOP2A	17	CT	CT	-	28
TP53	7157	hgsc.bcm.edu	36	17	7519186	7519186	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	7519186	7519186	TP53	17	C	C	A	19
TUSC3	7991	hgsc.bcm.edu	36	8	15561505	15561505	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Sanger_PCR_WGA	.	.	SOLID	Baylor	Missense_Mutation	SNP	15561505	15561505	TUSC3	8	T	T	C	52
VPS13D	55187	hgsc.bcm.edu	36	1	12236389	12236389	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1105-01	TCGA-24-1105-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_IV	Capture	Unknown	.	.	SOLID	Baylor	Missense_Mutation	SNP	12236389	12236389	VPS13D	1	G	G	T	34