Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context ZBTB48 3104 broad.mit.edu 36 1 6569905 6569905 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 6569905 6569905 ZBTB48 1 G G A 45 BAI2 576 broad.mit.edu 36 1 31969150 31969150 + Silent SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 31969150 31969150 BAI2 1 C C T 21 RABGGTB 5876 broad.mit.edu 36 1 76032914 76032914 + Silent SNP A A G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 76032914 76032914 RABGGTB 1 A A G 15 ARHGAP29 9411 broad.mit.edu 36 1 94417975 94417975 + Missense_Mutation SNP T T C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 94417975 94417975 ARHGAP29 1 T T C 49 RABGAP1L 9910 broad.mit.edu 36 1 173193654 173193654 + Missense_Mutation SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 173193654 173193654 RABGAP1L 1 G G C 48 ZNF238 10472 broad.mit.edu 36 1 242285143 242285143 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 242285143 242285143 ZNF238 1 C C T 27 ANKRD30A 91074 broad.mit.edu 36 10 37470980 37470980 + Silent SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 37470980 37470980 ANKRD30A 10 C C T 31 MADD 8567 broad.mit.edu 36 11 47289922 47289922 + Missense_Mutation SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 47289922 47289922 MADD 11 G G C 48 OR4C15 81309 broad.mit.edu 36 11 55079253 55079253 + Missense_Mutation SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 55079253 55079253 OR4C15 11 G G C 48 MTA2 9219 broad.mit.edu 36 11 62122408 62122408 + Missense_Mutation SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 62122408 62122408 MTA2 11 C C A 32 CDC42BPG 55561 broad.mit.edu 36 11 64365872 64365872 + Missense_Mutation SNP C C G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 64365872 64365872 CDC42BPG 11 C C G 28 FDXACB1 91893 broad.mit.edu 36 11 111254995 111254995 + Silent SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 111254995 111254995 FDXACB1 11 C C T 21 GALNT6 11226 broad.mit.edu 36 12 50034495 50034495 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 50034495 50034495 GALNT6 12 C C T 30 SMARCC2 6601 broad.mit.edu 36 12 54854765 54854765 + Missense_Mutation SNP T T A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 54854765 54854765 SMARCC2 12 T T A 63 NIACR2 8843 broad.mit.edu 36 12 121766190 121766190 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 121766190 121766190 NIACR2 12 C C T 23 SPERT 220082 broad.mit.edu 36 13 45185931 45185931 + Missense_Mutation SNP T T A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 45185931 45185931 SPERT 13 T T A 55 NFATC4 4776 broad.mit.edu 36 14 23908629 23908629 + Missense_Mutation SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 23908629 23908629 NFATC4 14 C C A 22 C14orf115 55237 broad.mit.edu 36 14 73893552 73893552 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 73893552 73893552 C14orf115 14 C C T 27 MGA 23269 broad.mit.edu 36 15 39839925 39839925 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 39839925 39839925 MGA 15 G G A 39 DENND4A 10260 broad.mit.edu 36 15 63831868 63831868 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 63831868 63831868 DENND4A 15 G G A 40 CACNA1H 8912 broad.mit.edu 36 16 1200487 1200487 + Missense_Mutation SNP G G T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 1200487 1200487 CACNA1H 16 G G T 42 ZNF646 9726 broad.mit.edu 36 16 30996303 30996303 + Missense_Mutation SNP C C G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 30996303 30996303 ZNF646 16 C C G 28 MYLK3 91807 broad.mit.edu 36 16 45339385 45339385 + Silent SNP G G T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 45339385 45339385 MYLK3 16 G G T 42 PLEKHG4 25894 broad.mit.edu 36 16 65872183 65872183 + Silent SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 65872183 65872183 PLEKHG4 16 C C T 28 SPAG7 9552 broad.mit.edu 36 17 4803656 4803656 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 4803656 4803656 SPAG7 17 C C T 19 TXNDC17 84817 broad.mit.edu 36 17 6486997 6486997 + Silent SNP T T G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 6486997 6486997 TXNDC17 17 T T G 54 TP53 7157 broad.mit.edu 36 17 7518901 7518901 + Splice_Site_SNP SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Splice_Site_SNP SNP 7518901 7518901 TP53 17 C C A 18 MKS1 54903 broad.mit.edu 36 17 53638477 53638477 + Nonsense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Nonsense_Mutation SNP 53638477 53638477 MKS1 17 G G A 46 ENPP7 339221 broad.mit.edu 36 17 75325572 75325572 + Silent SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 75325572 75325572 ENPP7 17 C C T 19 LAMA3 3909 broad.mit.edu 36 18 19656271 19656271 + Missense_Mutation SNP A A C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 19656271 19656271 LAMA3 18 A A C 16 PSPN 5623 broad.mit.edu 36 19 6326765 6326765 + Silent SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 6326765 6326765 PSPN 19 G G A 39 SCN1B 6324 broad.mit.edu 36 19 40216445 40216445 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 40216445 40216445 SCN1B 19 G G A 34 SBSN 374897 broad.mit.edu 36 19 40709533 40709533 + Silent SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 40709533 40709533 SBSN 19 C C A 22 FOXA3 3171 broad.mit.edu 36 19 51067737 51067737 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 51067737 51067737 FOXA3 19 C C T 19 NKG7 4818 broad.mit.edu 36 19 56567015 56567015 + Missense_Mutation SNP G G T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 56567015 56567015 NKG7 19 G G T 34 ZFP28 140612 broad.mit.edu 36 19 61751016 61751016 + Missense_Mutation SNP C C G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 61751016 61751016 ZFP28 19 C C G 32 SOS1 6654 broad.mit.edu 36 2 39066923 39066923 + Missense_Mutation SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 39066923 39066923 SOS1 2 G G C 35 MAP3K2 10746 broad.mit.edu 36 2 127799790 127799790 + Missense_Mutation SNP C C G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 127799790 127799790 MAP3K2 2 C C G 29 LRP1B 53353 broad.mit.edu 36 2 140847100 140847100 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 140847100 140847100 LRP1B 2 C C T 17 SCN7A 6332 broad.mit.edu 36 2 167037189 167037189 + Silent SNP A A T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 167037189 167037189 SCN7A 2 A A T 5 XIRP2 129446 broad.mit.edu 36 2 167811897 167811897 + Missense_Mutation SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 167811897 167811897 XIRP2 2 C C A 28 ZNF804A 91752 broad.mit.edu 36 2 185509004 185509004 + Silent SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 185509004 185509004 ZNF804A 2 C C A 31 ABCA12 26154 broad.mit.edu 36 2 215560750 215560750 + Missense_Mutation SNP A A G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 215560750 215560750 ABCA12 2 A A G 8 ZNF142 7701 broad.mit.edu 36 2 219222123 219222123 + Missense_Mutation SNP T T C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 219222123 219222123 ZNF142 2 T T C 58 ADA 100 broad.mit.edu 36 20 42684907 42684907 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 42684907 42684907 ADA 20 G G A 38 CECR5 27440 broad.mit.edu 36 22 15999025 15999025 + Silent SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 15999025 15999025 CECR5 22 G G A 40 IL5RA 3568 broad.mit.edu 36 3 3112080 3112080 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 3112080 3112080 IL5RA 3 C C T 19 NBEAL2 23218 broad.mit.edu 36 3 47013841 47013841 + Missense_Mutation SNP C C G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 47013841 47013841 NBEAL2 3 C C G 21 UBA7 7318 broad.mit.edu 36 3 49826037 49826037 + Missense_Mutation SNP A A T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 49826037 49826037 UBA7 3 A A T 10 HTR1F 3355 broad.mit.edu 36 3 88123278 88123278 + Missense_Mutation SNP T T A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 88123278 88123278 HTR1F 3 T T A 56 ZNF718 255403 broad.mit.edu 36 4 145481 145481 + Missense_Mutation SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 145481 145481 ZNF718 4 G G C 33 FAM193A 8603 broad.mit.edu 36 4 2618296 2618296 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 2618296 2618296 FAM193A 4 G G A 38 SKP2 6502 broad.mit.edu 36 5 36212823 36212823 + Splice_Site_SNP SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Splice_Site_SNP SNP 36212823 36212823 SKP2 5 G G C 33 CMYA5 202333 broad.mit.edu 36 5 79069509 79069509 + Silent SNP A A G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 79069509 79069509 CMYA5 5 A A G 4 EDIL3 10085 broad.mit.edu 36 5 83438390 83438390 + Missense_Mutation SNP G G T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 83438390 83438390 EDIL3 5 G G T 36 ADAMTS19 171019 broad.mit.edu 36 5 129047732 129047732 + Missense_Mutation SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 129047732 129047732 ADAMTS19 5 G G C 33 MGAT1 4245 broad.mit.edu 36 5 180151898 180151898 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 180151898 180151898 MGAT1 5 G G A 39 GFOD1 54438 broad.mit.edu 36 6 13473721 13473721 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 13473721 13473721 GFOD1 6 C C T 31 RPL10A 4736 broad.mit.edu 36 6 35544190 35544190 + Missense_Mutation SNP A A G novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 35544190 35544190 RPL10A 6 A A G 8 IBTK 25998 broad.mit.edu 36 6 82980899 82980899 + Silent SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 82980899 82980899 IBTK 6 G G A 44 EPHA7 2045 broad.mit.edu 36 6 94035998 94035998 + Silent SNP A A T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 94035998 94035998 EPHA7 6 A A T 3 POPDC3 64208 broad.mit.edu 36 6 105713131 105713131 + Silent SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 105713131 105713131 POPDC3 6 C C T 26 GJA1 2697 broad.mit.edu 36 6 121810772 121810772 + Missense_Mutation SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 121810772 121810772 GJA1 6 C C A 18 STX11 8676 broad.mit.edu 36 6 144549920 144549920 + Missense_Mutation SNP G G A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 144549920 144549920 STX11 6 G G A 37 GRM1 2911 broad.mit.edu 36 6 146392580 146392580 + Missense_Mutation SNP G G T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 146392580 146392580 GRM1 6 G G T 43 PKD1L1 168507 broad.mit.edu 36 7 47910608 47910608 + Missense_Mutation SNP A A C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 47910608 47910608 PKD1L1 7 A A C 6 SAMD9L 219285 broad.mit.edu 36 7 92599149 92599149 + Nonsense_Mutation SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Nonsense_Mutation SNP 92599149 92599149 SAMD9L 7 C C A 30 EMID2 136227 broad.mit.edu 36 7 100983345 100983345 + Missense_Mutation SNP G G T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 100983345 100983345 EMID2 7 G G T 43 HR 55806 broad.mit.edu 36 8 22041017 22041017 + Missense_Mutation SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 22041017 22041017 HR 8 C C A 26 ST18 9705 broad.mit.edu 36 8 53234147 53234147 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 53234147 53234147 ST18 8 C C T 19 BICD2 23299 broad.mit.edu 36 9 94521098 94521098 + Missense_Mutation SNP G G T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 94521098 94521098 BICD2 9 G G T 44 SLC34A3 142680 broad.mit.edu 36 9 139246415 139246415 + Missense_Mutation SNP C C A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 139246415 139246415 SLC34A3 9 C C A 17 CTPS2 56474 broad.mit.edu 36 X 16606455 16606455 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 16606455 16606455 CTPS2 23 C C T 31 WAS 7454 broad.mit.edu 36 X 48432310 48432310 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 48432310 48432310 WAS 23 C C T 30 LAS1L 81887 broad.mit.edu 36 X 64666232 64666232 + Missense_Mutation SNP A A C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 64666232 64666232 LAS1L 23 A A C 5 EFNB1 1947 broad.mit.edu 36 X 67976977 67976977 + Missense_Mutation SNP C C T novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 67976977 67976977 EFNB1 23 C C T 19 NONO 4841 broad.mit.edu 36 X 70431090 70431090 + Missense_Mutation SNP T T C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 70431090 70431090 NONO 23 T T C 56 DACH2 117154 broad.mit.edu 36 X 85836795 85836795 + Silent SNP T T A novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 85836795 85836795 DACH2 23 T T A 54 FMR1NB 158521 broad.mit.edu 36 X 146897883 146897883 + Missense_Mutation SNP G G C novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 146897883 146897883 FMR1NB 23 G G C 44 NBPF16 728936 broad.mit.edu 36 1 147019954 147019960 + Frame_Shift_Del DEL TTATCTT - TTATCTT novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown Phase_I Capture --- Illumina GAIIx Broad Frame_Shift_Del DEL 147019954 147019960 NBPF16 1 TTATCTT - TTATCTT 52 KRTAP5-5 439915 broad.mit.edu 36 11 1608162 1608191 + In_Frame_Del DEL CTGCTGCCAGTCCAGCTGCTGTAAGCCTTA - CTGCTGCCAGTCCAGCTGCTGTAAGCCTTA novel Unknown TCGA-25-2400-01 TCGA-25-2400-10 Unknown Unknown Unknown Phase_I Capture --- Illumina GAIIx Broad In_Frame_Del DEL 1608162 1608191 KRTAP5-5 11 CTGCTGCCAGTCCAGCTGCTGTAAGCCTTA - CTGCTGCCAGTCCAGCTGCTGTAAGCCTTA 24