Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID C14orf106 55320 hgsc.bcm.edu 36 14 44785769 44785769 + Frame_Shift_Del DEL T T - novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a CDH24 64403 hgsc.bcm.edu 36 14 22588879 22588879 + Missense_Mutation SNP G G T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a DOCK6 57572 hgsc.bcm.edu 36 19 11214933 11214933 + Splice_Site SNP C C A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a LRSAM1 90678 hgsc.bcm.edu 36 9 129269902 129269902 + Silent SNP T T G novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a PDE6B 5158 hgsc.bcm.edu 36 4 640768 640770 + In_Frame_Del DEL AAA AAA - novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 AAA AAA . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a SHANK2 22941 hgsc.bcm.edu 36 11 70009443 70009443 + Missense_Mutation SNP C C A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a TP53BP1 7158 hgsc.bcm.edu 36 15 41507627 41507627 + Missense_Mutation SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a USP35 57558 hgsc.bcm.edu 36 11 77598511 77598512 + Frame_Shift_Ins INS - - A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a ZNF295 49854 hgsc.bcm.edu 36 21 42284620 42284620 + Missense_Mutation SNP T T G novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a ZNF99 7652 hgsc.bcm.edu 36 19 22734121 22734121 + Missense_Mutation SNP T T C novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a ACTL6A 86 hgsc.bcm.edu 36 3 180770642 180770642 + Missense_Mutation SNP C C T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a ARSF 416 hgsc.bcm.edu 36 X 3029221 3029221 + Missense_Mutation SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a GRLF1 2909 hgsc.bcm.edu 36 19 52116700 52116700 + Silent SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a HIP1R 9026 hgsc.bcm.edu 36 12 121906808 121906808 + Silent SNP T T C novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 T T T C T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a KIF2B 84643 hgsc.bcm.edu 36 17 49257303 49257303 + Missense_Mutation SNP G G T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a NFRKB 4798 hgsc.bcm.edu 36 11 129251844 129251844 + Missense_Mutation SNP C C T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a RAD51AP2 729475 hgsc.bcm.edu 36 2 17555666 17555666 + Silent SNP C C T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a SIAH3 283514 hgsc.bcm.edu 36 13 45255914 45255914 + Missense_Mutation SNP C C T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a SLC19A3 80704 hgsc.bcm.edu 36 2 228271949 228271949 + Silent SNP C C A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C A C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a SLU7 10569 hgsc.bcm.edu 36 5 159773958 159773958 + Silent SNP T T C novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 T T T C T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a SPRR1B 6699 hgsc.bcm.edu 36 1 151271550 151271550 + Silent SNP C C T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a STK11IP 114790 hgsc.bcm.edu 36 2 220171079 220171079 + Silent SNP C C A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C A C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a ZNF41 7592 hgsc.bcm.edu 36 X 47192941 47192941 + Missense_Mutation SNP C C A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 C C C A C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a ZNF445 353274 hgsc.bcm.edu 36 3 44467430 44467430 + Silent SNP A A G novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 A A A G A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a GAPVD1 26130 hgsc.bcm.edu 36 9 127143323 127143323 + Missense_Mutation SNP G G T novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a NTM 50863 hgsc.bcm.edu 36 11 131521478 131521478 + Missense_Mutation SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a TAF2 6873 hgsc.bcm.edu 36 8 120883276 120883276 + Missense_Mutation SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a UGT2A2 574537 hgsc.bcm.edu 36 4 70539788 70539788 + Nonsense_Mutation SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a BRD2 6046 hgsc.bcm.edu 36 6 33051792 33051792 + Missense_Mutation SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a GRPR 2925 hgsc.bcm.edu 36 X 16078381 16078381 + Missense_Mutation SNP A A G novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 A A A G A A Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a LPHN2 23266 hgsc.bcm.edu 36 1 82228764 82228764 + Missense_Mutation SNP G G A novel TCGA-13-0727-01A-01W-0370-10 TCGA-13-0727-10B-01W-0370-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 63f7db06-e129-4fb2-9662-4b24d6fafc05 eacf145c-329c-434b-aecc-66cbf42d248a