Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID DUSP27 92235 broad.mit.edu 36 1 165362394 165362394 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc TET1 80312 broad.mit.edu 36 10 70121233 70121233 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc CCAR1 55749 broad.mit.edu 36 10 70217784 70217784 + Missense_Mutation SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc SHISA2 387914 broad.mit.edu 36 13 25518663 25518663 + Silent SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc CGNL1 84952 broad.mit.edu 36 15 55517809 55517809 + Missense_Mutation SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc MCTP2 55784 broad.mit.edu 36 15 92711912 92711912 + Missense_Mutation SNP G G T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc TP53 7157 broad.mit.edu 36 17 7517622 7517622 + Nonsense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc DHX8 1659 broad.mit.edu 36 17 38925628 38925628 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc MEP1B 4225 broad.mit.edu 36 18 28041333 28041333 + Missense_Mutation SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc C19orf47 126526 broad.mit.edu 36 19 45526256 45526256 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc ZNF331 55422 broad.mit.edu 36 19 58772204 58772204 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc SLC4A5 57835 broad.mit.edu 36 2 74313134 74313134 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc SCN2A 6326 broad.mit.edu 36 2 165907090 165907090 + Missense_Mutation SNP G G T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc FAM171B 165215 broad.mit.edu 36 2 187324232 187324232 + Missense_Mutation SNP G G C novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc PLTP 5360 broad.mit.edu 36 20 43971666 43971666 + Silent SNP A A C novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc SON 6651 broad.mit.edu 36 21 33847128 33847128 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc THAP9 79725 broad.mit.edu 36 4 84057373 84057373 + Silent SNP T T C novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc MAB21L2 10586 broad.mit.edu 36 4 151724424 151724424 + Missense_Mutation SNP C C A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc KIF2A 3796 broad.mit.edu 36 5 61704091 61704091 + Silent SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc PCDHA13 56136 broad.mit.edu 36 5 140242751 140242751 + Silent SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc ZFP57 346171 broad.mit.edu 36 6 29748981 29748981 + Silent SNP T T G novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc MAPK14 1432 broad.mit.edu 36 6 36103942 36103942 + Silent SNP G G C novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc OPRM1 4988 broad.mit.edu 36 6 154452831 154452831 + Silent SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc TNS3 64759 broad.mit.edu 36 7 47417873 47417873 + Nonsense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc AKAP9 10142 broad.mit.edu 36 7 91547318 91547318 + Missense_Mutation SNP A A T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc ORAI2 80228 broad.mit.edu 36 7 101866527 101866527 + Missense_Mutation SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc ZNF7 7553 broad.mit.edu 36 8 146038866 146038866 + Missense_Mutation SNP C C T novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc ACRC 93953 broad.mit.edu 36 X 70740618 70740618 + Missense_Mutation SNP G G A novel none TCGA-13-0899-01A-01W-0420-08 TCGA-13-0899-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx ae9e84ab-7e0f-42f5-a0a3-94a0011dbd80 3dfe5db0-29ec-40ba-8a59-53b1cbf903cc