Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
FCRL3	115352	genome.wustl.edu	36	1	155915181	155915181	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	155915181	155915181	T	C	SNP	FCRL3	NM_052939	human	genbank	54_36p	-1	reviewed	silent	c.2148	p.E716	0.04	NULL	-	-	no_errors
PAPPA2	60676	genome.wustl.edu	36	1	174935170	174935170	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	174935170	174935170	G	T	SNP	PAPPA2	NM_020318	human	genbank	54_36p	1	validated	missense	c.3058	p.V1020L	0.95	NULL	-	-	no_errors
LYST	1130	genome.wustl.edu	36	1	234036550	234036550	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	234036550	234036550	G	A	SNP	LYST	NM_000081	human	genbank	54_36p	-1	reviewed	missense	c.2509	p.P837S	0.52	NULL	-	-	no_errors
RYR2	6262	genome.wustl.edu	36	1	236003483	236003483	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	236003483	236003483	A	T	SNP	RYR2	NM_001035	human	genbank	54_36p	1	reviewed	missense	c.11687	p.D3896V	1	HMMPfam_RIH_assoc	HMMPfam_RYDR_ITPR;HMMPfam_efhand;HMMPfam_RyR;HMMPfam_MIR;HMMPfam_SPRY;HMMPfam_Ion_trans;HMMPfam_RR_TM4-6;HMMPfam_RIH_assoc;HMMPfam_Ins145_P3_rec;superfamily_EF-hand;superfamily_MIR domain (Pfam 02815)	-	no_errors
OR2T34	127068	genome.wustl.edu	36	1	246804504	246804504	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	246804504	246804504	G	T	SNP	OR2T34	NM_001001821	human	genbank	54_36p	-1	provisional	missense	c.178	p.L60I	0.96	NULL	-	-	no_errors
MECR	51102	genome.wustl.edu	36	1	29395312	29395312	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	29395312	29395312	G	A	SNP	MECR	ENST00000373792	human	ensembl	54_36p	-1	known	missense	c.757	p.R253C	0.42	NULL	-	-	no_errors
ROR1	4919	genome.wustl.edu	36	1	64375704	64375704	+	Missense_Mutation	SNP	G	A	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	A	G	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	64375704	64375704	G	A	SNP	ROR1	NM_005012	human	genbank	54_36p	1	validated	missense	c.547	p.G183S	1	HMMPfam_Fz	HMMPfam_Kringle;HMMPfam_Fz;HMMPfam_Pkinase_Tyr;superfamily_Protein kinase-like (PK-like);HMMPfam_I-set;superfamily_Kringle-like;superfamily_Immunoglobulin;superfamily_Frizzled cysteine-rich domain	-	no_errors
MSH4	4438	genome.wustl.edu	36	1	76127640	76127640	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	1	76127640	76127640	G	T	SNP	MSH4	NM_002440	human	genbank	54_36p	1	validated	nonsense	c.2224	p.E742*	1	HMMPfam_MutS_V	HMMPfam_MutS_V;HMMPfam_MutS_III;HMMPfam_MutS_II;HMMPfam_MutS_IV;superfamily_DNA repair protein MutS domain III;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_DNA repair protein MutS domain II	-	no_errors
FAM21B	55747	genome.wustl.edu	36	10	47431114	47431114	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	10	47431114	47431114	G	C	SNP	FAM21B	NM_018232	human	genbank	54_36p	1	validated	missense	c.976	p.G326R	0.98	NULL	-	-	no_errors
MMP8	4317	genome.wustl.edu	36	11	102092273	102092273	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	11	102092273	102092273	A	G	SNP	MMP8	NM_002424	human	genbank	54_36p	-1	reviewed	missense	c.872	p.L291P	0.96	HMMPfam_Hemopexin	"HMMPfam_Hemopexin;superfamily_Hemopexin-like domain;HMMPfam_Peptidase_M10;HMMPfam_PG_binding_1;superfamily_PGBD-like;superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
CCDC88B	283234	genome.wustl.edu	36	11	63868078	63868078	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	11	63868078	63868078	G	C	SNP	CCDC88B	NM_032251	human	genbank	54_36p	1	validated	missense	c.1489	p.V497L		NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
STK33	65975	genome.wustl.edu	36	11	8370708	8370708	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	11	8370708	8370708	C	T	SNP	STK33	NM_030906	human	genbank	54_36p	-1	validated	silent	c.1470	p.V490		NULL	HMMPfam_Pkinase;superfamily_Protein kinase-like (PK-like)	-	no_errors
FDXACB1	91893	genome.wustl.edu	36	11	111251600	111251600	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	11	111251600	111251600	A	T	SNP	FDXACB1	NM_138378	human	genbank	54_36p	-1	validated	missense	c.1131	p.F377L	1	NULL	-	-	no_errors
ACACB	32	genome.wustl.edu	36	12	108145067	108145067	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	12	108145067	108145067	G	T	SNP	ACACB	NM_001093	human	genbank	54_36p	1	reviewed	missense	c.3759	p.M1253I	1	HMMPfam_ACC_central	HMMPfam_Carboxyl_trans;HMMPfam_Biotin_lipoyl;HMMPfam_CPSase_L_D2;HMMPfam_CPSase_L_chain;HMMPfam_Biotin_carb_C;superfamily_Single hybrid motif;superfamily_Rudiment single hybrid motif;HMMPfam_ACC_central;superfamily_ClpP/crotonase;superfamily_PreATP-grasp domain;superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
SLCO1C1	53919	genome.wustl.edu	36	12	20781415	20781416	+	Missense_Mutation	DNP	CA	CA	AG	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	CA	CA	CA	AG	CA	CA	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	12	20781415	20781416	CA	AG	DNP	SLCO1C1	NM_017435	human	genbank	54_36p	1	reviewed	missense	c.1490_1491	p.T497K	0.999:0.845	HMMPfam_OATP:HMMPfam_Kazal_2	HMMPfam_OATP;HMMPfam_Kazal_2;superfamily_Kazal-type serine protease inhibitors;superfamily_MFS general substrate transporter	-	no_errors
TBK1	29110	genome.wustl.edu	36	12	63175583	63175583	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	12	63175583	63175583	A	T	SNP	TBK1	NM_013254	human	genbank	54_36p	1	reviewed	missense	c.1575	p.R525S	0.94	NULL	HMMPfam_Pkinase;Pkinase;Protein kinase-like (PK-like);superfamily_Protein kinase-like (PK-like);Ubiquitin-like;superfamily_Ubiquitin-like	-	no_errors
OR4L1	122742	genome.wustl.edu	36	14	19598948	19598948	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	14	19598948	19598948	G	T	SNP	OR4L1	NM_001004717	human	genbank	54_36p	1	provisional	missense	c.905	p.R302L		NULL	-	-	no_errors
SLC35F4	341880	genome.wustl.edu	36	14	57133217	57133217	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	14	57133217	57133217	G	T	SNP	SLC35F4	NM_001080455	human	genbank	54_36p	-1	inferred	nonsense	c.152	p.S51*		NULL	-	-	no_errors
FOS	2353	genome.wustl.edu	36	14	74817470	74817470	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	14	74817470	74817470	A	C	SNP	FOS	NM_005252	human	genbank	54_36p	1	reviewed	missense	c.733	p.N245H		NULL	superfamily_A DNA-binding domain in eukaryotic transcription factors;bZIP_2;HMMPfam_bZIP_2	-	no_errors
LOC653720	653720	genome.wustl.edu	36	15	26752020	26752020	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	15	26752020	26752020	C	T	SNP	LOC653720	XM_001724258	human	genbank	54_36p	-1	model	missense	c.506	p.R169H	0.82	NULL	-	-	no_errors
MYO5A	4644	genome.wustl.edu	36	15	50505448	50505448	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	15	50505448	50505448	G	C	SNP	MYO5A	NM_000259	human	genbank	54_36p	-1	reviewed	missense	c.326	p.A109G	1	HMMPfam_Myosin_head	HMMPfam_IQ;HMMPfam_Myosin_head;HMMPfam_DIL;superfamily_Myosin S1 fragment N-terminal domain;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_Skp1 dimerisation domain-like	-	no_errors
ZNF592	9640	genome.wustl.edu	36	15	83144123	83144123	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	15	83144123	83144123	G	C	SNP	ZNF592	NM_014630	human	genbank	54_36p	1	validated	missense	c.3184	p.E1062Q	1	NULL	superfamily_C2H2 and C2HC zinc fingers;HMMPfam_zf-C2H2;superfamily_Multiheme cytochromes	-	no_errors
IQGAP1	8826	genome.wustl.edu	36	15	88820975	88820975	+	Missense_Mutation	SNP	A	G	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	15	88820975	88820975	A	G	SNP	IQGAP1	NM_003870	human	genbank	54_36p	1	reviewed	missense	c.2861	p.Q954R	1	NULL	IQ;HMMPfam_IQ;RasGAP_C;HMMPfam_RasGAP_C;WW;HMMPfam_WW;CH;HMMPfam_CH;RasGAP;HMMPfam_RasGAP;GTPase activation domain GAP;superfamily_GTPase activation domain GAP;Calponin-homology domain CH-domain;superfamily_Calponin-homology domain CH-domain;P-loop containing nucleoside triphosphate hydrolases;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TSC2	7249	genome.wustl.edu	36	16	2076354	2076354	+	Missense_Mutation	SNP	T	G	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	T	T	G	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	16	2076354	2076354	T	G	SNP	TSC2	NM_000548	human	genbank	54_36p	1	reviewed	missense	c.4822	p.Y1608D	1	HMMPfam_Rap_GAP	Rap_GAP,HMMPfam_Rap_GAP,Tuberin,HMMPfam_Tuberin	-	no_errors
GTF3C1	2975	genome.wustl.edu	36	16	27416611	27416611	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	16	27416611	27416611	C	T	SNP	GTF3C1	NM_001520	human	genbank	54_36p	-1	validated	missense	c.2198	p.G733E		NULL	-	-	no_errors
ITGAL	3683	genome.wustl.edu	36	16	30394135	30394135	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	16	30394135	30394135	G	A	SNP	ITGAL	NM_002209	human	genbank	54_36p	1	reviewed	missense	c.172	p.V58M	1	NULL	HMMPfam_VWA;HMMPfam_Integrin_alpha;HMMPfam_FG-GAP;HMMPfam_Integrin_alpha2;superfamily_vWA-like;superfamily_Integrin domains;superfamily_Integrin alpha N-terminal domain	-	no_errors
DNAH9	1770	genome.wustl.edu	36	17	11749704	11749704	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	17	11749704	11749704	G	T	SNP	DNAH9	NM_001372	human	genbank	54_36p	1	reviewed	missense	c.11602	p.D3868Y	1	HMMPfam_Dynein_heavy	HMMPfam_Dynein_heavy;superfamily_Acyl-CoA dehydrogenase C-terminal domain-like;HMMPfam_AAA_5;HMMPfam_DHC_N1;HMMPfam_DHC_N2;superfamily_Spectrin repeat;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518960	7518960	+	Missense_Mutation	SNP	T	C	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	T	T	C	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	17	7518960	7518960	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.614	p.Y205C	0.97	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
AZI1	22994	genome.wustl.edu	36	17	76788158	76788158	+	Missense_Mutation	SNP	C	C	A		Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	17	76788158	76788158	C	A	SNP	AZI1	NM_014984	human	genbank	54_36p	-1	validated	missense	c.979	p.A327S	0.993	NULL	HMMPfam_IQ	-	no_errors
DOCK6	57572	genome.wustl.edu	36	19	11172437	11172437	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	19	11172437	11172437	C	T	SNP	DOCK6	NM_020812	human	genbank	54_36p	-1	validated	missense	c.5894	p.R1965Q	1	HMMPfam_Ded_cyto	superfamily_Cyanase C-terminal domain;HMMPfam_Ded_cyto	-	no_errors
CYP4F3	4051	genome.wustl.edu	36	19	15617570	15617570	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	19	15617570	15617570	G	A	SNP	CYP4F3	NM_000896	human	genbank	54_36p	1	reviewed	silent	c.240	p.L80	0.99	HMMPfam_p450	HMMPfam_p450;superfamily_Cytochrome P450	-	no_errors
LOC646864	646864	genome.wustl.edu	36	19	22832529	22832529	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	19	22832529	22832529	G	A	SNP	LOC646864	XM_001726885	human	genbank	54_36p	1	model	silent	c.1083	p.K361	0.33	NULL	-	-	no_errors
RGPD3	653489	genome.wustl.edu	36	2	106419448	106419448	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	106419448	106419448	G	A	SNP	RGPD3	ENST00000304514	human	ensembl	54_36p	-1	known	silent	c.1488	p.S496	1	NULL	-	-	no_errors
EVX2	344191	genome.wustl.edu	36	2	176655383	176655383	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	176655383	176655383	C	A	SNP	EVX2	NM_001080458	human	genbank	54_36p	-1	provisional	silent	c.468	p.S156	0.05	NULL	-	-	no_errors
PGAP1	80055	genome.wustl.edu	36	2	197466198	197466198	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	197466198	197466198	T	C	SNP	PGAP1	NM_024989	human	genbank	54_36p	-1	validated	missense	c.944	p.K315R	1	NULL	HMMPfam_PGAP1;superfamily_alpha/beta-Hydrolases	-	no_errors
ANKRD44	91526	genome.wustl.edu	36	2	197574733	197574733	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	197574733	197574733	C	T	SNP	ANKRD44	NM_153697	human	genbank	54_36p	-1	provisional	silent	c.2349	p.L783	1	NULL	-	-	no_errors
STK11IP	114790	genome.wustl.edu	36	2	220175042	220175042	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	220175042	220175042	C	T	SNP	STK11IP	ENST00000295641	human	ensembl	54_36p	1	known	missense	c.431	p.A144V	1	NULL	HMMPfam_LRR_1;superfamily_Outer arm dynein light chain 1;superfamily_Rubredoxin-like	-	no_errors
ATAD2B	54454	genome.wustl.edu	36	2	23946050	23946050	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	23946050	23946050	T	C	SNP	ATAD2B	NM_017552	human	genbank	54_36p	-1	validated	missense	c.1063	p.R355G	1	NULL	-	-	no_errors
MFSD2B	388931	genome.wustl.edu	36	2	24092584	24092584	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	24092584	24092584	G	T	SNP	LOC388931	NM_001080473	human	genbank	54_36p	1	predicted	missense	c.277	p.A93S	0.97	NULL	-	-	no_errors
XDH	7498	genome.wustl.edu	36	2	31424687	31424687	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	31424687	31424687	G	C	SNP	XDH	NM_000379	human	genbank	54_36p	-1	reviewed	missense	c.3098	p.T1033S	1	HMMPfam_Ald_Xan_dh_C2	HMMPfam_Ald_Xan_dh_C,superfamily_CO dehydrogenase molybdoprotein N-domain-like,HMMPfam_Fer2,superfamily_2Fe-2S ferredoxin-like,HMMPfam_FAD_binding_5,HMMPfam_Fer2_2,superfamily_CO dehydrogenase ISP C-domain like,HMMPfam_CO_deh_flav_C,superfamily_CO dehydrogenase flavoprotein C-terminal domain-like,HMMPfam_Ald_Xan_dh_C2,superfamily_Molybdenum cofactor-binding domain,superfamily_FAD-binding domain	-	no_errors
KCMF1	56888	genome.wustl.edu	36	2	85126817	85126817	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	2	85126817	85126817	C	T	SNP	KCMF1	NM_020122	human	genbank	54_36p	1	validated	missense	c.506	p.S169L	1	NULL	-	-	no_errors
SDCBP2	27111	genome.wustl.edu	36	20	1249033	1249033	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	20	1249033	1249033	C	G	SNP	SDCBP2	NM_080489	human	genbank	54_36p	-1	validated	missense	c.28	p.D10H	1	NULL	-	-	no_errors
SEC23B	10483	genome.wustl.edu	36	20	18444360	18444360	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	20	18444360	18444360	A	C	SNP	SEC23B	NM_006363	human	genbank	54_36p	1	reviewed	missense	c.346	p.T116P	1	NULL	HMMPfam_zf-Sec23_Sec24;HMMPfam_Sec23_trunk;HMMPfam_Sec23_helical;HMMPfam_Gelsolin;HMMPfam_Sec23_BS;superfamily_vWA-like;superfamily_Helical domain of Sec23/24;superfamily_beta-sandwich domain of Sec23/24;superfamily_C-terminal gelsolin-like domain of Sec23/24;superfamily_Zn-finger domain of Sec23/24	-	no_errors
FOXA2	3170	genome.wustl.edu	36	20	22511343	22511343	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	20	22511343	22511343	C	A	SNP	FOXA2	NM_021784	human	genbank	54_36p	-1	reviewed	missense	c.519	p.Q173H	1	HMMPfam_Fork_head	"HMMPfam_Fork_head;HMMPfam_Fork_head_N;superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
SLC23A2	9962	genome.wustl.edu	36	20	4831179	4831179	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	20	4831179	4831179	C	G	SNP	SLC23A2	NM_005116	human	genbank	54_36p	-1	reviewed	missense	c.233	p.S78T	1	NULL	-	-	no_errors
MOCS3	27304	genome.wustl.edu	36	20	49008919	49008919	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	20	49008919	49008919	C	A	SNP	MOCS3	NM_014484	human	genbank	54_36p	1	reviewed	missense	c.133	p.P45T		NULL	-	-	no_errors
NFATC2	4773	genome.wustl.edu	36	20	49573866	49573866	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	20	49573866	49573866	C	T	SNP	NFATC2	NM_173091	human	genbank	54_36p	-1	reviewed	silent	c.321	p.S107	1	NULL	HMMPfam_TIG;superfamily_p53-like transcription factors;HMMPfam_RHD;superfamily_E set domains	-	no_errors
LIPI	149998	genome.wustl.edu	36	21	14457677	14457677	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	21	14457677	14457677	T	A	SNP	LIPI	NM_198996	human	genbank	54_36p	-1	validated	missense	c.1003	p.R335W	0.01	HMMPfam_Lipase	HMMPfam_Lipase;superfamily_alpha/beta-Hydrolases	-	no_errors
LARGE	9215	genome.wustl.edu	36	22	32042112	32042112	+	Missense_Mutation	SNP	G	C	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	C	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	22	32042112	32042112	G	C	SNP	LARGE	NM_004737	human	genbank	54_36p	-1	reviewed	missense	c.1410	p.D470E	1	NULL	HMMPfam_Glyco_transf_8;superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
ENSG00000100181	0	genome.wustl.edu	36	22	37087469	37087469	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	22	37087469	37087469	G	A	SNP	ENSG00000100181	ENST00000381645	human	ensembl	54_36p	-1	known	silent	c.318	p.V106	0.68	NULL	-	-	no_stop_codon
SNORD116-2	100033414	genome.wustl.edu	36	15	22850526	22850526	+	RNA	SNP	C	C	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	15	22850526	22850526	C	A	SNP	SNORD116-2	NR_003317	human	genbank	54_36p	1	provisional	rna	NULL	NULL	0.07	-	-	-	no_errors
ABI3BP	25890	genome.wustl.edu	36	3	102087731	102087731	+	Missense_Mutation	SNP	G	G	C		Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	3	102087731	102087731	G	C	SNP	ABI3BP	NM_015429	human	genbank	54_36p	-1	validated	missense	c.609	p.D203E	0.997	HMMPfam_fn3	HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
KIAA1407	57577	genome.wustl.edu	36	3	115236543	115236543	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	3	115236543	115236543	T	A	SNP	KIAA1407	NM_020817	human	genbank	54_36p	-1	predicted	missense	c.737	p.E246V	1	NULL	-	-	no_errors
GOLGB1	2804	genome.wustl.edu	36	3	122892521	122892521	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	3	122892521	122892521	C	T	SNP	GOLGB1	NM_004487	human	genbank	54_36p	-1	validated	missense	c.8365	p.A2789T		NULL	-	-	no_errors
MME	4311	genome.wustl.edu	36	3	156317412	156317412	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	3	156317412	156317412	C	G	SNP	MME	NM_000902	human	genbank	54_36p	1	reviewed	silent	c.597	p.V199	1	HMMPfam_Peptidase_M13_N	"HMMPfam_Peptidase_M13;HMMPfam_Peptidase_M13_N;superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
SATB1	6304	genome.wustl.edu	36	3	18411363	18411363	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	3	18411363	18411363	G	C	SNP	SATB1	NM_002971	human	genbank	54_36p	-1	validated	silent	c.801	p.V267	1	NULL	HMMPfam_Homeobox;HMMPfam_CUT;superfamily_Homeodomain-like;superfamily_lambda repressor-like DNA-binding domains	-	no_errors
CHL1	10752	genome.wustl.edu	36	3	418318	418318	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	3	418318	418318	A	T	SNP	CHL1	NM_006614	human	genbank	54_36p	1	reviewed	missense	c.3395	p.K1132M	1	NULL	fn3;HMMPfam_fn3;Fibronectin type III;superfamily_Fibronectin type III;I-set;HMMPfam_I-set;V-set;HMMPfam_V-set;ig;HMMPfam_ig;Immunoglobulin;superfamily_Immunoglobulin	-	no_errors
LOC100132910	100132910	genome.wustl.edu	36	18	35168915	35168915	+	Missense_Mutation	SNP	G	C	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	G	G	C	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	18	35168915	35168915	G	C	SNP	LOC100132910	XM_001720527	human	genbank	54_36p	1	model	missense	c.109	p.V37L	0.99	NULL	-	-	no_errors
PCDHA3	56145	genome.wustl.edu	36	5	140161602	140161602	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	5	140161602	140161602	A	G	SNP	PCDHA3	NM_018906	human	genbank	54_36p	1	reviewed	missense	c.636	p.I212M	0.62	NULL	-	-	no_errors
HDAC3	8841	genome.wustl.edu	36	5	140989610	140989610	+	Splice_Site	SNP	C	C	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	5	140989610	140989610	C	A	SNP	HDAC3	NM_003883	human	genbank	54_36p	-1	reviewed	splice_site	c.420+1	e5+1	1	-	-	-	no_errors
NOTCH4	4855	genome.wustl.edu	36	6	32296776	32296776	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	6	32296776	32296776	C	T	SNP	NOTCH4	NM_004557	human	genbank	54_36p	-1	reviewed	missense	c.756	p.M252I	0.63	HMMPfam_EGF	HMMPfam_Notch;HMMPfam_Ank;superfamily_Ankyrin repeat;HMMPfam_EGF;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_NODP;HMMPfam_EGF_CA;superfamily_EGF/Laminin;superfamily_Notch domain	-	no_errors
CPVL	54504	genome.wustl.edu	36	7	29077912	29077912	+	Splice_Site	SNP	A	A	C	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	7	29077912	29077912	A	C	SNP	CPVL	NM_019029	human	genbank	54_36p	-1	reviewed	splice_site	c.864+2	e8+2	1	-	-	-	no_errors
UNC5D	137970	genome.wustl.edu	36	8	35663633	35663633	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	8	35663633	35663633	A	G	SNP	UNC5D	NM_080872	human	genbank	54_36p	1	validated	silent	c.933	p.E311	1	NULL	-	-	no_errors
FKBP15	23307	genome.wustl.edu	36	9	114971419	114971419	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	9	114971419	114971419	A	T	SNP	FKBP15	NM_015258	human	genbank	54_36p	-1	validated	missense	c.3391	p.S1131T	0.01	NULL	-	-	no_errors
RC3H2	54542	genome.wustl.edu	36	9	124662101	124662101	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	9	124662101	124662101	A	G	SNP	RC3H2	NM_001100588	human	genbank	54_36p	-1	validated	missense	c.1765	p.Y589H	1	NULL	-	-	no_errors
ABO	28	genome.wustl.edu	36	9	135125043	135125043	+	Splice_Site	SNP	C	C	T	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	9	135125043	135125043	C	T	SNP	ABO	ENST00000319878	human	ensembl	54_36p	-1	known	splice_site	c.203+1	e4+1	0.01	-	-	-	no_errors
ARHGAP36	158763	genome.wustl.edu	36	X	130048248	130048248	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0903-01A-01W-0421-09	TCGA-13-0903-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	854167b5-03ab-4867-af34-9c92e385822e	1924390a-e794-4a5b-96ac-7daa074b4ac7	X	130048248	130048248	C	A	SNP	FLJ30058	NM_144967	human	genbank	54_36p	1	validated	missense	c.1414	p.L472I	1	NULL	-	-	no_errors