Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AADACL4 343066 broad.mit.edu 36 1 12648632 12648632 + Missense_Mutation SNP A A C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 RPE65 6121 broad.mit.edu 36 1 68677271 68677271 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 PTGFR 5737 broad.mit.edu 36 1 78731443 78731443 + Missense_Mutation SNP C C A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ODF2L 57489 broad.mit.edu 36 1 86594815 86594815 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ABCA4 24 broad.mit.edu 36 1 94294785 94294785 + Missense_Mutation SNP G G T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 LBR 3930 broad.mit.edu 36 1 223664643 223664643 + Silent SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 CUBN 8029 broad.mit.edu 36 10 17182224 17182224 + Silent SNP A A G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 MYPN 84665 broad.mit.edu 36 10 69625251 69625251 + Missense_Mutation SNP T T G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 PACS1 55690 broad.mit.edu 36 11 65594709 65594709 + Missense_Mutation SNP C C G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 SERPINH1 871 broad.mit.edu 36 11 74955282 74955282 + Silent SNP C C G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 FAT3 120114 broad.mit.edu 36 11 91726643 91726643 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 WNK1 65125 broad.mit.edu 36 12 809542 809542 + Silent SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 H2AFJ 55766 broad.mit.edu 36 12 14818950 14818950 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 STK38L 23012 broad.mit.edu 36 12 27362215 27362215 + Missense_Mutation SNP C C A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 CEP290 80184 broad.mit.edu 36 12 86989785 86989785 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 MYH7 4625 broad.mit.edu 36 14 22971763 22971763 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 DLK1 8788 broad.mit.edu 36 14 100270974 100270974 + Silent SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 THBS1 7057 broad.mit.edu 36 15 37663834 37663834 + Silent SNP T T A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TTBK2 146057 broad.mit.edu 36 15 40832482 40832482 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 IL4R 3566 broad.mit.edu 36 16 27281903 27281903 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TUBB3 10381 broad.mit.edu 36 16 88527464 88527464 + Missense_Mutation SNP T T C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 YWHAE 7531 broad.mit.edu 36 17 1250112 1250112 + Nonsense_Mutation SNP C C A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TP53 7157 broad.mit.edu 36 17 7517830 7517830 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TNS4 84951 broad.mit.edu 36 17 35889572 35889572 + Missense_Mutation SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 WFIKKN2 124857 broad.mit.edu 36 17 46272336 46272336 + Missense_Mutation SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 COX11 1353 broad.mit.edu 36 17 50400990 50400990 + Missense_Mutation SNP C C A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TTYH2 94015 broad.mit.edu 36 17 69758052 69758052 + Silent SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 KIAA0802 23255 broad.mit.edu 36 18 8815314 8815314 + Missense_Mutation SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 LAMA3 3909 broad.mit.edu 36 18 19673834 19673834 + Silent SNP C C G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 MUC16 94025 broad.mit.edu 36 19 8944768 8944768 + Missense_Mutation SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ILF3 3609 broad.mit.edu 36 19 10654341 10654341 + Silent SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 PRODH2 58510 broad.mit.edu 36 19 40994993 40994993 + Missense_Mutation SNP G G T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TEX101 83639 broad.mit.edu 36 19 48612233 48612233 + Silent SNP A A T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ZNF610 162963 broad.mit.edu 36 19 57561365 57561365 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ZSCAN1 284312 broad.mit.edu 36 19 63255711 63255711 + Silent SNP A A T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ETAA1 54465 broad.mit.edu 36 2 67485207 67485207 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 CNGA3 1261 broad.mit.edu 36 2 98380026 98380026 + Missense_Mutation SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 LYG2 254773 broad.mit.edu 36 2 99228301 99228301 + Silent SNP A A C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TANC1 85461 broad.mit.edu 36 2 159794435 159794435 + Nonsense_Mutation SNP A A T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 DYTN 391475 broad.mit.edu 36 2 207224851 207224851 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 SLC4A11 83959 broad.mit.edu 36 20 3163474 3163474 + Missense_Mutation SNP A A T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 WFDC5 149708 broad.mit.edu 36 20 43172775 43172775 + Silent SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 STAU1 6780 broad.mit.edu 36 20 47169963 47169963 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 GNAS 2778 broad.mit.edu 36 20 56913889 56913889 + Nonsense_Mutation SNP C C G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 GGT5 2687 broad.mit.edu 36 22 22952670 22952670 + Missense_Mutation SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 WNT7A 7476 broad.mit.edu 36 3 13835897 13835897 + Missense_Mutation SNP C C G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 CAPN7 23473 broad.mit.edu 36 3 15257122 15257122 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 DNAH1 25981 broad.mit.edu 36 3 52405674 52405674 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 HSPBAP1 79663 broad.mit.edu 36 3 123970328 123970328 + Silent SNP T T A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 C3orf59 151963 broad.mit.edu 36 3 193999044 193999044 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 IL7R 3575 broad.mit.edu 36 5 35896794 35896794 + Missense_Mutation SNP A A T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ERBB2IP 55914 broad.mit.edu 36 5 65352971 65352971 + Splice_Site SNP T T A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 PJA2 9867 broad.mit.edu 36 5 108745197 108745197 + Missense_Mutation SNP T T G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 PCDHB5 26167 broad.mit.edu 36 5 140495805 140495805 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 HTR4 3360 broad.mit.edu 36 5 147869419 147869419 + Missense_Mutation SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 BAT2 7916 broad.mit.edu 36 6 31711457 31711457 + Silent SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ASCC3 10973 broad.mit.edu 36 6 101354981 101354981 + Missense_Mutation SNP G G A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 KIAA1919 91749 broad.mit.edu 36 6 111691771 111691771 + Missense_Mutation SNP T T A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 FSCN1 6624 broad.mit.edu 36 7 5610090 5610090 + Silent SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 DLX6 1750 broad.mit.edu 36 7 96474989 96474989 + Missense_Mutation SNP G G T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 TRPV5 56302 broad.mit.edu 36 7 142332804 142332804 + Missense_Mutation SNP C C A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 WDR60 55112 broad.mit.edu 36 7 158365361 158365361 + Missense_Mutation SNP T T G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ADAMTSL1 92949 broad.mit.edu 36 9 18766831 18766831 + Missense_Mutation SNP G G T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 COL5A1 1289 broad.mit.edu 36 9 136799012 136799012 + Silent SNP A A T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 POLA1 5422 broad.mit.edu 36 X 24737953 24737953 + Silent SNP A A G novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 CLCN5 1184 broad.mit.edu 36 X 49743532 49743532 + Missense_Mutation SNP G G T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 FGD1 2245 broad.mit.edu 36 X 54498936 54498936 + Missense_Mutation SNP C C T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 FAM123B 139285 broad.mit.edu 36 X 63326799 63326799 + Silent SNP G G C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ACRC 93953 broad.mit.edu 36 X 70745675 70745675 + Missense_Mutation SNP T T A novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 PAK3 5063 broad.mit.edu 36 X 110324209 110324209 + Missense_Mutation SNP G G T novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 IGSF1 3547 broad.mit.edu 36 X 130244862 130244862 + Missense_Mutation SNP T T C novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 GPR37L1 9283 broad.mit.edu 36 1 200363835 200363843 + In_Frame_Del DEL CAGTCACCT - CAGTCACCT novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 CAGTCACCT CAGTCACCT - - CAGTCACCT CAGTCACCT Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 PRKCQ 5588 broad.mit.edu 36 10 6565544 6565562 + Frame_Shift_Del DEL GACTCCCAGGAAATGCCCT - GACTCCCAGGAAATGCCCT novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 GACTCCCAGGAAATGCCCT GACTCCCAGGAAATGCCCT - - GACTCCCAGGAAATGCCCT GACTCCCAGGAAATGCCCT Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 OR6X1 390260 broad.mit.edu 36 11 123130340 123130340 + Frame_Shift_Del DEL A - - novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 A A - - A A Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 FOXJ2 55810 broad.mit.edu 36 12 8083874 8083881 + Frame_Shift_Del DEL CAGTGCAC - CAGTGCAC novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 CAGTGCAC CAGTGCAC - - CAGTGCAC CAGTGCAC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 KIAA1409 57578 broad.mit.edu 36 14 93116303 93116353 + In_Frame_Del DEL ACATTATTTCTATTATAAACAATGTCTTCCAAGCCCCCTGGGGGGGATCCC - ACATTATTTCTATTATAAACAATGTCTTCCAAGCCCCCTGGGGGGGATCCC novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 ACATTATTTCTATTATAAACAATGTCTTCCAAGCCCCCTGGGGGGGATCCC ACATTATTTCTATTATAAACAATGTCTTCCAAGCCCCCTGGGGGGGATCCC - - ACATTATTTCTATTATAAACAATGTCTTCCAAGCCCCCTGGGGGGGATCCC ACATTATTTCTATTATAAACAATGTCTTCCAAGCCCCCTGGGGGGGATCCC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 MUC16 94025 broad.mit.edu 36 19 8949834 8949848 + In_Frame_Del DEL GCAGAGAGAGAAGTG - GCAGAGAGAGAAGTG novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 GCAGAGAGAGAAGTG GCAGAGAGAGAAGTG - - GCAGAGAGAGAAGTG GCAGAGAGAGAAGTG Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ASNA1 439 broad.mit.edu 36 19 12717512 12717523 + In_Frame_Del DEL TGGAGCGGGGCC - TGGAGCGGGGCC novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 TGGAGCGGGGCC TGGAGCGGGGCC - - TGGAGCGGGGCC TGGAGCGGGGCC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 MYO3B 140469 broad.mit.edu 36 2 170948469 170948498 + In_Frame_Del DEL TCCAGACTTTATCATGGGGTGAAACGCGCC - TCCAGACTTTATCATGGGGTGAAACGCGCC novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 TCCAGACTTTATCATGGGGTGAAACGCGCC TCCAGACTTTATCATGGGGTGAAACGCGCC - - TCCAGACTTTATCATGGGGTGAAACGCGCC TCCAGACTTTATCATGGGGTGAAACGCGCC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 DCAF4L2 138009 broad.mit.edu 36 8 88955315 88955320 + Translation_Start_Site DEL TTTCGT - TTTCGT novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 TTTCGT TTTCGT - - TTTCGT TTTCGT Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83 ARMCX2 9823 broad.mit.edu 36 X 100798262 100798284 + Frame_Shift_Del DEL GGCTGCAGCAGCTGCTGCAGCCC - GGCTGCAGCAGCTGCTGCAGCCC novel none TCGA-13-0913-01A-01W-0420-08 TCGA-13-0913-10A-01D-0399-08 GGCTGCAGCAGCTGCTGCAGCCC GGCTGCAGCAGCTGCTGCAGCCC - - GGCTGCAGCAGCTGCTGCAGCCC GGCTGCAGCAGCTGCTGCAGCCC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx d2d97613-b6e5-439f-8a94-f6a7b0527bb0 279308ab-f861-4610-861c-101455a72c83