Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID PDPN 10630 broad.mit.edu 36 1 13809526 13809526 + Missense_Mutation SNP G G C novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b FMO5 2330 broad.mit.edu 36 1 145139448 145139448 + Missense_Mutation SNP T T G novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b FCRL2 79368 broad.mit.edu 36 1 155985361 155985361 + Missense_Mutation SNP G G A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b AKR1C1 1645 broad.mit.edu 36 10 4998131 4998131 + Missense_Mutation SNP C C A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b ZNF33A 7581 broad.mit.edu 36 10 38384567 38384567 + Silent SNP G G C novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b HSPA12A 259217 broad.mit.edu 36 10 118424738 118424738 + Silent SNP G G A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b AHNAK 79026 broad.mit.edu 36 11 62055266 62055266 + Missense_Mutation SNP T T C novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b MAPKAPK5 8550 broad.mit.edu 36 12 110802716 110802716 + Splice_Site SNP T T A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 T T A A T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b POTEB 339010 broad.mit.edu 36 15 19336052 19336052 + Silent SNP A A T rs28566570 unknown TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b PKD1L2 114780 broad.mit.edu 36 16 79745444 79745444 + Missense_Mutation SNP C C A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b TP53 7157 broad.mit.edu 36 17 7518991 7518991 + Missense_Mutation SNP T T A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 T T A A T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b CRKRS 51755 broad.mit.edu 36 17 34881415 34881415 + Nonsense_Mutation SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b WDR7 23335 broad.mit.edu 36 18 52514569 52514569 + Missense_Mutation SNP A A C novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b ATP13A1 57130 broad.mit.edu 36 19 19628522 19628522 + Missense_Mutation SNP G G A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b ZNF43 7594 broad.mit.edu 36 19 21782339 21782339 + Missense_Mutation SNP A A C novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b ZNF473 25888 broad.mit.edu 36 19 55241592 55241592 + Nonsense_Mutation SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b SYT3 84258 broad.mit.edu 36 19 55827455 55827455 + Missense_Mutation SNP C C A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b ZNF665 79788 broad.mit.edu 36 19 58360782 58360782 + Missense_Mutation SNP C C A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b GPR113 165082 broad.mit.edu 36 2 26387192 26387192 + Missense_Mutation SNP C C G novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b CRNKL1 51340 broad.mit.edu 36 20 19979249 19979249 + Silent SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b COMT 1312 broad.mit.edu 36 22 18331093 18331093 + Silent SNP G G A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b SETMAR 6419 broad.mit.edu 36 3 4329990 4329990 + Missense_Mutation SNP G G A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b LRRC3B 116135 broad.mit.edu 36 3 26726762 26726762 + Missense_Mutation SNP A A G novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b SI 6476 broad.mit.edu 36 3 166224101 166224101 + Missense_Mutation SNP G G T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b PPARGC1A 10891 broad.mit.edu 36 4 23425162 23425162 + Missense_Mutation SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b SEC31A 22872 broad.mit.edu 36 4 83989074 83989074 + Silent SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b DCHS2 54798 broad.mit.edu 36 4 155438480 155438480 + Missense_Mutation SNP C C G novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b TRIM7 81786 broad.mit.edu 36 5 180559616 180559616 + Silent SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b HLA-DPB1 3115 broad.mit.edu 36 6 33151827 33151827 + Silent SNP C C A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b T 6862 broad.mit.edu 36 6 166491851 166491851 + Missense_Mutation SNP G G A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b PXMP3 5828 broad.mit.edu 36 8 78058564 78058564 + Nonsense_Mutation SNP T T A novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b FRMD3 257019 broad.mit.edu 36 9 85147995 85147995 + Silent SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b CPXCR1 53336 broad.mit.edu 36 X 87895468 87895468 + Nonsense_Mutation SNP C C T novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b RBMX2 51634 broad.mit.edu 36 X 129370969 129370969 + Silent SNP A A G novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b BCDIN3D 144233 broad.mit.edu 36 12 48518700 48518700 + Frame_Shift_Del DEL C - C novel none TCGA-13-1495-01A-01W-0545-08 TCGA-13-1495-10A-01D-0472-08 C C - - C C Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb 2b681f1b-9f68-419d-b5c2-97447d78a44b