Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID MASP2 10747 broad.mit.edu 36 1 11020432 11020432 + Missense_Mutation SNP C C G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 COL16A1 1307 broad.mit.edu 36 1 31890972 31890972 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 INADL 10207 broad.mit.edu 36 1 62004545 62004545 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 FLG2 388698 broad.mit.edu 36 1 150593692 150593692 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ATP8B2 57198 broad.mit.edu 36 1 152582580 152582580 + Missense_Mutation SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ARHGEF2 9181 broad.mit.edu 36 1 154188380 154188380 + Missense_Mutation SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 NHLH1 4807 broad.mit.edu 36 1 158607168 158607168 + Missense_Mutation SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 SCYL3 57147 broad.mit.edu 36 1 168091670 168091670 + Missense_Mutation SNP C C G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PLD5 200150 broad.mit.edu 36 1 240319968 240319968 + Silent SNP T T G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 OR2W3 343171 broad.mit.edu 36 1 246126017 246126017 + Missense_Mutation SNP G G A rs12083024 byFrequency;byHapMap TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PIK3AP1 118788 broad.mit.edu 36 10 98370188 98370188 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 AHNAK 79026 broad.mit.edu 36 11 62050498 62050498 + Missense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 C2CD3 26005 broad.mit.edu 36 11 73511754 73511754 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 FAT3 120114 broad.mit.edu 36 11 92216961 92216961 + Missense_Mutation SNP A A T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 TECTA 7007 broad.mit.edu 36 11 120536216 120536216 + Missense_Mutation SNP G G T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 SLC38A4 55089 broad.mit.edu 36 12 45456983 45456983 + Missense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 MLL2 8085 broad.mit.edu 36 12 47723920 47723920 + Nonsense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 SCN8A 6334 broad.mit.edu 36 12 50487199 50487199 + Missense_Mutation SNP A A T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ACVR1B 91 broad.mit.edu 36 12 50664218 50664218 + Splice_Site SNP G G C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 NCKAP1L 3071 broad.mit.edu 36 12 53197611 53197611 + Missense_Mutation SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 NACA 4666 broad.mit.edu 36 12 55398181 55398181 + Missense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 XPOT 11260 broad.mit.edu 36 12 63100528 63100528 + Missense_Mutation SNP G G C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 GOLGA3 2802 broad.mit.edu 36 12 131875697 131875697 + Missense_Mutation SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ELF1 1997 broad.mit.edu 36 13 40415221 40415221 + Missense_Mutation SNP G G C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 FAM12B 64184 broad.mit.edu 36 14 20308225 20308225 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 SLC39A2 29986 broad.mit.edu 36 14 20539252 20539252 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 MLH3 27030 broad.mit.edu 36 14 74584640 74584640 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 FBXO39 162517 broad.mit.edu 36 17 6624415 6624415 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 FAM134C 162427 broad.mit.edu 36 17 37990759 37990759 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 WNK4 65266 broad.mit.edu 36 17 38202086 38202086 + Missense_Mutation SNP C C G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 HDAC5 10014 broad.mit.edu 36 17 39520443 39520443 + Missense_Mutation SNP G G C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 COIL 8161 broad.mit.edu 36 17 52374485 52374485 + Splice_Site SNP T T A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 LAMA1 284217 broad.mit.edu 36 18 7023075 7023075 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 LAMA3 3909 broad.mit.edu 36 18 19692763 19692763 + Missense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 MALT1 10892 broad.mit.edu 36 18 54565850 54565850 + Silent SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 INSR 3643 broad.mit.edu 36 19 7068323 7068323 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 GADD45GIP1 90480 broad.mit.edu 36 19 12926202 12926202 + Silent SNP G G C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 EPS15L1 58513 broad.mit.edu 36 19 16389758 16389758 + Splice_Site SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 CPAMD8 27151 broad.mit.edu 36 19 16952496 16952496 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ZNF99 7652 broad.mit.edu 36 19 22733086 22733086 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 RYR1 6261 broad.mit.edu 36 19 43707977 43707977 + Missense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 APOB 338 broad.mit.edu 36 2 21079652 21079652 + Missense_Mutation SNP A A T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 MTIF2 4528 broad.mit.edu 36 2 55327035 55327035 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 EIF2AK3 9451 broad.mit.edu 36 2 88671555 88671555 + Missense_Mutation SNP C C G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 GCC2 9648 broad.mit.edu 36 2 108454151 108454151 + Missense_Mutation SNP T T G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T G G T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 IL1F9 56300 broad.mit.edu 36 2 113458926 113458926 + Silent SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 MBD5 55777 broad.mit.edu 36 2 148963614 148963614 + Missense_Mutation SNP G G T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PIKFYVE 200576 broad.mit.edu 36 2 208908841 208908841 + Nonsense_Mutation SNP A A T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 SPHKAP 80309 broad.mit.edu 36 2 228589653 228589653 + Silent SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 DTD1 92675 broad.mit.edu 36 20 18524815 18524815 + Silent SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ZNF341 84905 broad.mit.edu 36 20 31835302 31835302 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 RBM12 10137 broad.mit.edu 36 20 33705596 33705596 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 HNF4A 3172 broad.mit.edu 36 20 42490438 42490438 + Silent SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PREX1 57580 broad.mit.edu 36 20 46758287 46758287 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 RSPH1 89765 broad.mit.edu 36 21 42766027 42766027 + Silent SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 TRIOBP 11078 broad.mit.edu 36 22 36450946 36450946 + Missense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 GRM7 2917 broad.mit.edu 36 3 7431806 7431806 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 FGD5 152273 broad.mit.edu 36 3 14837164 14837164 + Missense_Mutation SNP G G C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PARP15 165631 broad.mit.edu 36 3 123836714 123836714 + Missense_Mutation SNP G G A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PARP14 54625 broad.mit.edu 36 3 123905422 123905422 + Silent SNP A A T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 RPN1 6184 broad.mit.edu 36 3 129827101 129827101 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 KIAA0232 9778 broad.mit.edu 36 4 6913893 6913893 + Missense_Mutation SNP G G T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 HERC5 51191 broad.mit.edu 36 4 89644476 89644476 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 MAML3 55534 broad.mit.edu 36 4 141030778 141030778 + Missense_Mutation SNP G G C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 NSA2 10412 broad.mit.edu 36 5 74102274 74102274 + Silent SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 POLK 51426 broad.mit.edu 36 5 74900959 74900959 + Silent SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 GABRA6 2559 broad.mit.edu 36 5 161049887 161049887 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ODZ2 57451 broad.mit.edu 36 5 167607395 167607395 + Missense_Mutation SNP C C G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PANK3 79646 broad.mit.edu 36 5 167923585 167923585 + Missense_Mutation SNP C C G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 MSH5 4439 broad.mit.edu 36 6 31835702 31835702 + Silent SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ITPR3 3710 broad.mit.edu 36 6 33756419 33756419 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 HTR1E 3354 broad.mit.edu 36 6 87781917 87781917 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PDE10A 10846 broad.mit.edu 36 6 165747019 165747019 + Missense_Mutation SNP A A C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A C C A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PSMA2 5683 broad.mit.edu 36 7 42930912 42930912 + Silent SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 URG4 55665 broad.mit.edu 36 7 43884411 43884411 + Silent SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 RABGEF1 27342 broad.mit.edu 36 7 65907680 65907680 + Silent SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 RP1L1 94137 broad.mit.edu 36 8 10503593 10503593 + Missense_Mutation SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 IDO2 169355 broad.mit.edu 36 8 39925913 39925913 + Missense_Mutation SNP G G T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PXDNL 137902 broad.mit.edu 36 8 52483360 52483360 + Missense_Mutation SNP A A G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 ASAP1 50807 broad.mit.edu 36 8 131197069 131197069 + Missense_Mutation SNP T T C novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PHF2 5253 broad.mit.edu 36 9 95456662 95456662 + Silent SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 PHF8 23133 broad.mit.edu 36 X 54028157 54028157 + Missense_Mutation SNP C C G novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 TRO 7216 broad.mit.edu 36 X 54966870 54966870 + Missense_Mutation SNP C C A novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 BEX2 84707 broad.mit.edu 36 X 102451537 102451537 + Silent SNP C C T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 DUSP9 1852 broad.mit.edu 36 X 152568794 152568794 + Missense_Mutation SNP A A T novel none TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6 TP53 7157 broad.mit.edu 36 17 7518263 7518263 + Missense_Mutation SNP C C T rs11540652 byHapMap TCGA-24-0979-01A-01W-0486-08 TCGA-24-0979-10B-01W-0486-08 C C T T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Capture Illumina GAIIx dc38f821-63a0-4336-83d4-9f1c87c3155d e5fe43fa-670a-4ba0-8ca2-30100230cef6