Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID PTPRC 5788 broad.mit.edu 36 1 196964122 196964122 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 PCDH15 65217 broad.mit.edu 36 10 55236635 55236635 + Missense_Mutation SNP G G C novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 OR52I1 390037 broad.mit.edu 36 11 4572239 4572239 + Missense_Mutation SNP A A G novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 LRRK2 120892 broad.mit.edu 36 12 39002427 39002427 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 RBM19 9904 broad.mit.edu 36 12 112859282 112859282 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 TCTN2 79867 broad.mit.edu 36 12 122745445 122745445 + Silent SNP T T A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 PIBF1 10464 broad.mit.edu 36 13 72326219 72326219 + Missense_Mutation SNP A A G novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 C14orf159 80017 broad.mit.edu 36 14 90760915 90760915 + Silent SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 MTMR10 54893 broad.mit.edu 36 15 29038406 29038406 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 MAPK6 5597 broad.mit.edu 36 15 50143789 50143789 + Missense_Mutation SNP A A C novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 SV2B 9899 broad.mit.edu 36 15 89610891 89610891 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 DNAH3 55567 broad.mit.edu 36 16 20988398 20988398 + Missense_Mutation SNP T T A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 TP53 7157 broad.mit.edu 36 17 7518263 7518263 + Missense_Mutation SNP C C T rs11540652 byHapMap TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 NACA2 342538 broad.mit.edu 36 17 57023095 57023095 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 SLC25A19 60386 broad.mit.edu 36 17 70791212 70791212 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 PQLC1 80148 broad.mit.edu 36 18 75811712 75811712 + Nonsense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 SMARCA4 6597 broad.mit.edu 36 19 10979635 10979635 + Missense_Mutation SNP A A G novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 CRTC1 23373 broad.mit.edu 36 19 18747579 18747579 + Silent SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 ZNF180 7733 broad.mit.edu 36 19 49672811 49672811 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 TEAD2 8463 broad.mit.edu 36 19 54554517 54554517 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 CGREF1 10669 broad.mit.edu 36 2 27178469 27178469 + Silent SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 HEATR5B 54497 broad.mit.edu 36 2 37081236 37081236 + Missense_Mutation SNP G G T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 FANCL 55120 broad.mit.edu 36 2 58302626 58302626 + Missense_Mutation SNP A A G novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 POU3F3 5455 broad.mit.edu 36 2 104839468 104839468 + Silent SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 ZC3H6 376940 broad.mit.edu 36 2 112806178 112806178 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 DPP10 57628 broad.mit.edu 36 2 116227271 116227271 + Silent SNP A A T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 TTC21B 79809 broad.mit.edu 36 2 166505814 166505814 + Missense_Mutation SNP C C A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 MN1 4330 broad.mit.edu 36 22 26526333 26526333 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 FLJ10213 55096 broad.mit.edu 36 3 73194204 73194204 + Silent SNP A A G novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 OTOP1 133060 broad.mit.edu 36 4 4250428 4250428 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 LNX1 84708 broad.mit.edu 36 4 54118881 54118881 + Silent SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 DDIT4L 115265 broad.mit.edu 36 4 101327861 101327861 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 TSSK1B 83942 broad.mit.edu 36 5 112797741 112797741 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 PCDHA4 56144 broad.mit.edu 36 5 140167040 140167040 + Silent SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 GABRG2 2566 broad.mit.edu 36 5 161508812 161508812 + Missense_Mutation SNP C C G novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 BBS9 27241 broad.mit.edu 36 7 33161813 33161813 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 EBF2 64641 broad.mit.edu 36 8 25774565 25774565 + Missense_Mutation SNP G G A novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 ADAMTSL2 9719 broad.mit.edu 36 9 135402129 135402129 + Silent SNP G G T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 MAGED2 10916 broad.mit.edu 36 X 54853268 54853268 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 IRS4 8471 broad.mit.edu 36 X 107864039 107864039 + Missense_Mutation SNP C C T novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 TRIT1 54802 broad.mit.edu 36 1 40088471 40088471 + Frame_Shift_Del DEL G - G novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 G G - - G G Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 SLC30A1 7779 broad.mit.edu 36 1 209815859 209815865 + Frame_Shift_Del DEL CAGATTC - CAGATTC novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 CAGATTC CAGATTC - - CAGATTC CAGATTC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762 FLJ30058 158763 broad.mit.edu 36 X 130043567 130043570 + Frame_Shift_Del DEL GACA - GACA novel none TCGA-24-2260-01A-01W-0722-08 TCGA-24-2260-11A-01W-0722-08 GACA GACA - - GACA GACA Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx efe741eb-7ce2-4d6c-b852-8598413c649e fef5b503-2b89-41e6-80b2-cc70c511d762