Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID CIZ1 25792 hgsc.bcm.edu 36 9 129987678 129987678 + Missense_Mutation SNP C C T novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc IGSF10 285313 hgsc.bcm.edu 36 3 152638411 152638411 + Missense_Mutation SNP C C T novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc SLC12A5 57468 hgsc.bcm.edu 36 20 44108387 44108387 + Missense_Mutation SNP C C G novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc ZBTB11 27107 hgsc.bcm.edu 36 3 102853083 102853083 + Nonsense_Mutation SNP G G A novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc DSC3 1825 hgsc.bcm.edu 36 18 26835613 26835613 + Missense_Mutation SNP G G A novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc EML1 2009 hgsc.bcm.edu 36 14 99411069 99411069 + Silent SNP G G A novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc KIAA1324L 222223 hgsc.bcm.edu 36 7 86380315 86380315 + Missense_Mutation SNP G G A novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc SALL1 6299 hgsc.bcm.edu 36 16 49731057 49731057 + Missense_Mutation SNP C C G novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C C G C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc TLR7 51284 hgsc.bcm.edu 36 X 12814267 12814267 + Missense_Mutation SNP T T C novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 T T T C T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc TTC39C 125488 hgsc.bcm.edu 36 18 19914798 19914798 + Missense_Mutation SNP C C T novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc ABCA1 19 hgsc.bcm.edu 36 9 106616559 106616559 + Missense_Mutation SNP C C T novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc CAD 790 hgsc.bcm.edu 36 2 27310987 27310987 + Missense_Mutation SNP C C T novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc HMCN1 83872 hgsc.bcm.edu 36 1 184275617 184275617 + Missense_Mutation SNP T T G novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 T T T G T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc ICAM3 3385 hgsc.bcm.edu 36 19 10311218 10311218 + Missense_Mutation SNP G G A novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 G G A A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc RARG 5916 hgsc.bcm.edu 36 12 51907577 51907577 + Missense_Mutation SNP C C T novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc RB1 5925 hgsc.bcm.edu 36 13 47849054 47849054 + Splice_Site SNP G G C novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 G G G C G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc STAG2 10735 hgsc.bcm.edu 36 X 123048091 123048091 + Nonsense_Mutation SNP G G T novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 G G G T G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc TP53 7157 hgsc.bcm.edu 36 17 7518231 7518231 + Missense_Mutation SNP C C A novel TCGA-25-1635-01A-01W-0615-10 TCGA-25-1635-10A-01W-0616-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID b7551bc9-c6f2-4e7f-a78d-3feba08889a5 8eb5b8f2-6282-4e07-a0f2-7f867b325cdc