Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID TNFRSF9 3604 broad.mit.edu 36 1 7922616 7922616 + Missense_Mutation SNP A A T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 YBX1 4904 broad.mit.edu 36 1 42921706 42921706 + Missense_Mutation SNP G G T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 NPR1 4881 broad.mit.edu 36 1 151926389 151926389 + Silent SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 PFKP 5214 broad.mit.edu 36 10 3164604 3164604 + Missense_Mutation SNP G G C novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 PSD 5662 broad.mit.edu 36 10 104166290 104166290 + Missense_Mutation SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 OR6A2 8590 broad.mit.edu 36 11 6772720 6772720 + Missense_Mutation SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 A2ML1 144568 broad.mit.edu 36 12 8882264 8882264 + Silent SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 PDE1B 5153 broad.mit.edu 36 12 53256677 53256677 + Missense_Mutation SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 TIMELESS 8914 broad.mit.edu 36 12 55103349 55103349 + Silent SNP A A G novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 MTIF3 219402 broad.mit.edu 36 13 26909388 26909388 + Silent SNP C C A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 SYNE2 23224 broad.mit.edu 36 14 63759661 63759661 + Missense_Mutation SNP A A C novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 OCA2 4948 broad.mit.edu 36 15 25902144 25902144 + Missense_Mutation SNP G G C novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 INO80 54617 broad.mit.edu 36 15 39063352 39063352 + Silent SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 MGRN1 23295 broad.mit.edu 36 16 4658286 4658286 + Missense_Mutation SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 IL21R 50615 broad.mit.edu 36 16 27367753 27367753 + Missense_Mutation SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 KRTAP9-3 83900 broad.mit.edu 36 17 36642507 36642507 + Silent SNP T T C novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 GPR142 350383 broad.mit.edu 36 17 69875436 69875436 + Nonsense_Mutation SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 CETN1 1068 broad.mit.edu 36 18 570898 570898 + Missense_Mutation SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 ALPK2 115701 broad.mit.edu 36 18 54354532 54354532 + Silent SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 FBXO15 201456 broad.mit.edu 36 18 69891772 69891772 + Silent SNP C C A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 TUBB4 10382 broad.mit.edu 36 19 6446297 6446297 + Missense_Mutation SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 TRMT1 55621 broad.mit.edu 36 19 13081216 13081216 + Missense_Mutation SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 GRLF1 2909 broad.mit.edu 36 19 52115528 52115528 + Nonsense_Mutation SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 ZNF611 81856 broad.mit.edu 36 19 57900299 57900299 + Silent SNP T T A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 ZNF776 284309 broad.mit.edu 36 19 62957005 62957005 + Missense_Mutation SNP G G C novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 INPP5D 3635 broad.mit.edu 36 2 233698786 233698786 + Nonsense_Mutation SNP C C G novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 ZNF217 7764 broad.mit.edu 36 20 51625714 51625714 + Missense_Mutation SNP C C G novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 KREMEN1 83999 broad.mit.edu 36 22 27867934 27867934 + Missense_Mutation SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 PIK3IP1 113791 broad.mit.edu 36 22 30009151 30009151 + Silent SNP C C G novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 SENP7 57337 broad.mit.edu 36 3 102533628 102533628 + Silent SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 WDR55 54853 broad.mit.edu 36 5 140029001 140029001 + Missense_Mutation SNP A A C novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 MUC21 394263 broad.mit.edu 36 6 31062239 31062239 + Missense_Mutation SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 GPR141 353345 broad.mit.edu 36 7 37747314 37747314 + Missense_Mutation SNP A A G novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 MAGI2 9863 broad.mit.edu 36 7 77723552 77723552 + Missense_Mutation SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 TRPV5 56302 broad.mit.edu 36 7 142335310 142335310 + Silent SNP G G T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 ZNF212 7988 broad.mit.edu 36 7 148582403 148582403 + Silent SNP G G A novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779 ARMCX2 9823 broad.mit.edu 36 X 100798796 100798796 + Silent SNP C C T novel none TCGA-25-2398-01A-01W-0799-08 TCGA-25-2398-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx b4b3281b-5dfc-434d-a9a6-2c2d94123220 ba4008d0-ef83-4cba-af98-742284b48779