Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID NES 10763 broad.mit.edu 36 1 154906731 154906731 + Silent SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f RC3H1 149041 broad.mit.edu 36 1 172228718 172228718 + Missense_Mutation SNP T T A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f ACBD6 84320 broad.mit.edu 36 1 178524220 178524220 + Silent SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f OPTN 10133 broad.mit.edu 36 10 13207996 13207996 + Missense_Mutation SNP A A C novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f TTC17 55761 broad.mit.edu 36 11 43375487 43375487 + Missense_Mutation SNP T T A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f NOP2 4839 broad.mit.edu 36 12 6543333 6543333 + Missense_Mutation SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f LOH12CR1 118426 broad.mit.edu 36 12 12405482 12405482 + Missense_Mutation SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f C12orf60 144608 broad.mit.edu 36 12 14867807 14867807 + Missense_Mutation SNP T T G novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f GCOM1 145781 broad.mit.edu 36 15 55697672 55697672 + Missense_Mutation SNP C C G novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f TP53 7157 broad.mit.edu 36 17 7518272 7518272 + Missense_Mutation SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f SPTBN4 57731 broad.mit.edu 36 19 45730457 45730457 + Missense_Mutation SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f ZNF749 388567 broad.mit.edu 36 19 62647610 62647610 + Missense_Mutation SNP C C G novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f KIDINS220 57498 broad.mit.edu 36 2 8858020 8858020 + Silent SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f LRRTM4 80059 broad.mit.edu 36 2 77599406 77599406 + Missense_Mutation SNP A A G novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f ORC4L 5000 broad.mit.edu 36 2 148409633 148409633 + Silent SNP A A G novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f ITGB6 3694 broad.mit.edu 36 2 160702284 160702284 + Missense_Mutation SNP T T C novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f RBL1 5933 broad.mit.edu 36 20 35069252 35069252 + Silent SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f FAM83D 81610 broad.mit.edu 36 20 37014368 37014368 + Nonsense_Mutation SNP G G T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f BCAS1 8537 broad.mit.edu 36 20 52025338 52025338 + Missense_Mutation SNP C C A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f TMPRSS3 64699 broad.mit.edu 36 21 42668909 42668909 + Silent SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f TBC1D23 55773 broad.mit.edu 36 3 101503764 101503764 + Missense_Mutation SNP T T G novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f COPG 22820 broad.mit.edu 36 3 130462264 130462264 + Missense_Mutation SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f COPG 22820 broad.mit.edu 36 3 130469502 130469502 + Missense_Mutation SNP A A G novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f C4orf29 80167 broad.mit.edu 36 4 129160698 129160698 + Missense_Mutation SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f RICTOR 253260 broad.mit.edu 36 5 38983252 38983252 + Silent SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f SQSTM1 8878 broad.mit.edu 36 5 179183612 179183612 + Silent SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f SLC22A23 63027 broad.mit.edu 36 6 3218558 3218558 + Silent SNP G G A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f DHX16 8449 broad.mit.edu 36 6 30741282 30741282 + Missense_Mutation SNP G G T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f DHX16 8449 broad.mit.edu 36 6 30741394 30741394 + Missense_Mutation SNP C C A novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f ENPP4 22875 broad.mit.edu 36 6 46219244 46219244 + Missense_Mutation SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f RNF216 54476 broad.mit.edu 36 7 5727257 5727257 + Missense_Mutation SNP C C T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f SEMA3E 9723 broad.mit.edu 36 7 82957408 82957408 + Silent SNP T T C novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f ZKSCAN1 7586 broad.mit.edu 36 7 99468905 99468905 + Missense_Mutation SNP G G T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f RECK 8434 broad.mit.edu 36 9 36092105 36092105 + Missense_Mutation SNP A A T novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f GFPT2 9945 broad.mit.edu 36 5 179696183 179696183 + Frame_Shift_Del DEL C - C novel none TCGA-30-1853-01A-02W-0699-08 TCGA-30-1853-10A-01W-0699-08 C C - - C C Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx 00900ef4-1012-4a8c-a173-e0bbc5efa30d 5337b78f-18b3-4628-a694-24293687d10f