Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error ENO3 2027 genome.wustl.edu 36 17 4797768 4797768 + Missense_Mutation SNP A A G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 17 4797768 4797768 A G SNP ENO3 NM_001976 human genbank 54_36p +1 reviewed missense c.326 p.N109S 1.000 HMMPfam_Enolase_N,superfamily_Enolase N-terminal domain-like HMMPfam_Enolase_N,superfamily_Enolase N-terminal domain-like,superfamily_Enolase C-terminal domain-like,HMMPfam_Enolase_C,PatternScan_ENOLASE - no_errors TP53 7157 genome.wustl.edu 36 17 7519167 7519167 + Missense_Mutation SNP T C C novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 17 7519167 7519167 T C SNP TP53 NM_000546 human genbank 54_36p -1 reviewed missense c.488 p.Y163C 1.000 HMMPfam_P53,superfamily_p53-like transcription factors HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain - no_errors PIK3CD 5293 genome.wustl.edu 36 1 9704677 9704677 + Missense_Mutation SNP A A G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 1 9704677 9704677 A G SNP PIK3CD NM_005026 human genbank 54_36p +1 validated missense c.2113 p.K705E 1.000 superfamily_Kinase_like HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2 - no_errors ZNF333 84449 genome.wustl.edu 36 19 14690218 14690218 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 19 14690218 14690218 G A SNP ZNF333 NM_032433 human genbank 54_36p +1 validated missense c.1079 p.R360H 0.014 NULL superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1 - no_errors TUSC3 7991 genome.wustl.edu 36 8 15442329 15442329 + Missense_Mutation SNP C C A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 8 15442329 15442329 C A SNP TUSC3 NM_006765 human genbank 54_36p +1 reviewed missense c.19 p.P7T 1.000 NULL HMMPfam_OST3_OST6,superfamily_Thioredoxin-like - no_errors KIAA1797 54914 genome.wustl.edu 36 9 20902864 20902864 + Splice_Site SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 9 20902864 20902864 G A SNP KIAA1797 NM_017794 human genbank 54_36p +1 validated splice_site c.2719-1 e22-1 1.000 - - - no_errors uc001ywg.1 0 genome.wustl.edu 36 15 21240258 21240258 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 15 21240258 21240258 G A SNP uc001ywg.1 ENST00000312015 human ensembl 54_36p -1 known missense c.350 p.A117V 0.011 NULL NULL - no_errors ARMC3 219681 genome.wustl.edu 36 10 23332200 23332200 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 10 23332200 23332200 G A SNP ARMC3 NM_173081 human genbank 54_36p +1 validated missense c.1582 p.E528K 1.000 superfamily_ARM repeat superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185 - no_errors C20orf3 57136 genome.wustl.edu 36 20 24898955 24898955 + Missense_Mutation SNP C C A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 20 24898955 24898955 C A SNP C20orf3 NM_020531 human genbank 54_36p -1 validated missense c.591 p.M197I 1.000 superfamily_Calcium-dependent phosphotriesterase superfamily_Calcium-dependent phosphotriesterase,HMMPfam_Str_synth - no_errors EPHX2 2053 genome.wustl.edu 36 8 27425333 27425333 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 8 27425333 27425333 G A SNP EPHX2 NM_001979 human genbank 54_36p +1 reviewed missense c.724 p.V242M 0.769 superfamily_SSF53474 HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF53474,HMMPfam_Abhydrolase_1 - no_errors ZNF165 7718 genome.wustl.edu 36 6 28165022 28165022 + Missense_Mutation SNP A A G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 6 28165022 28165022 A G SNP ZNF165 NM_003447 human genbank 54_36p +1 reviewed missense c.1253 p.H418R 0.941 superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1 HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1 - no_errors SDC3 9672 genome.wustl.edu 36 1 31118756 31118756 + Silent SNP C C A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 1 31118756 31118756 C A SNP SDC3 NM_014654 human genbank 54_36p -1 validated silent c.1218 p.L406 1.000 HMMPfam_Syndecan HMMPfam_Syndecan,HMMSmart_SM00294,PatternScan_SYNDECAN - no_errors ZNF438 220929 genome.wustl.edu 36 10 31174114 31174114 + Missense_Mutation SNP A A G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 10 31174114 31174114 A G SNP ZNF438 NM_182755 human genbank 54_36p -1 validated missense c.2269 p.C757R 0.000 NULL superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2 - no_errors RXFP3 51289 genome.wustl.edu 36 5 33973522 33973522 + Missense_Mutation SNP C C T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 5 33973522 33973522 C T SNP RXFP3 NM_016568 human genbank 54_36p +1 provisional missense c.920 p.A307V 0.001 superfamily_SSF81321,HMMPfam_7tm_1 PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1 - no_errors EIF2C3 192669 genome.wustl.edu 36 1 36252146 36252146 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 1 36252146 36252146 G A SNP EIF2C3 NM_024852 human genbank 54_36p +1 reviewed missense c.1316 p.R439Q 1.000 NULL HMMPfam_DUF1785,superfamily_SSF101690,HMMPfam_PAZ,superfamily_RNaseH_fold,HMMPfam_Piwi - no_errors SPINT1 6692 genome.wustl.edu 36 15 38935781 38935781 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 15 38935781 38935781 G A SNP SPINT1 NM_181642 human genbank 54_36p +1 reviewed missense c.1352 p.G451D 0.996 NULL HMMPfam_MANEC,HMMSmart_SM00765,superfamily_BPTI-like,HMMSmart_SM00131,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1,HMMPfam_Ldl_recept_a,superfamily_LDL receptor-like module,HMMSmart_SM00192,PatternScan_LDLRA_1 - no_errors LRFN2 57497 genome.wustl.edu 36 6 40468113 40468113 + Silent SNP G G T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 6 40468113 40468113 G T SNP LRFN2 NM_020737 human genbank 54_36p -1 provisional silent c.1917 p.P639 0.925 NULL superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_fn3,superfamily_Fibronectin type III - no_errors CDC14C 168448 genome.wustl.edu 36 7 48935213 48935213 + RNA SNP T T G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 7 48935213 48935213 T G SNP CDC14C NR_003595 human genbank 54_36p +1 provisional rna NULL NULL 0.853 - - - pseudogene CACNA1D 776 genome.wustl.edu 36 3 53754752 53754752 + Missense_Mutation SNP C C G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 3 53754752 53754752 C G SNP CACNA1D NM_000720 human genbank 54_36p +1 validated missense c.3128 p.T1043S 1.000 superfamily_SSF81324,HMMPfam_Ion_trans superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ - no_errors MBL2 4153 genome.wustl.edu 36 10 54197926 54197926 + Missense_Mutation SNP C T T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 10 54197926 54197926 C T SNP MBL2 NM_000242 human genbank 54_36p -1 reviewed missense c.724 p.A242T 0.002 HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1 HMMPfam_Collagen,HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1 - no_errors LOC645291 645291 genome.wustl.edu 36 1 68400811 68400811 + RNA SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 1 68400811 68400811 G A SNP LOC645291 XR_017617 human genbank 54_36p -1 model rna NULL NULL 1.000 - - - pseudogene DHX38 9785 genome.wustl.edu 36 16 70695414 70695414 + Silent SNP G A A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 16 70695414 70695414 G A SNP DHX38 NM_014003 human genbank 54_36p +1 reviewed silent c.1893 p.G631 1.000 HMMSmart_DEXDc,superfamily_SSF52540 HMMSmart_DEXDc,superfamily_SSF52540,PatternScan_DEAH_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605 - no_errors ARHGEF17 9828 genome.wustl.edu 36 11 72699279 72699279 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 11 72699279 72699279 G A SNP ARHGEF17 NM_014786 human genbank 54_36p +1 validated missense c.1948 p.A650T 0.911 NULL superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase - no_errors TMEM60 85025 genome.wustl.edu 36 7 77261582 77261582 + Silent SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 7 77261582 77261582 G A SNP TMEM60 NM_032936 human genbank 54_36p -1 validated silent c.45 p.F15 1.000 NULL NULL - no_errors C10orf58 84293 genome.wustl.edu 36 10 82177222 82177222 + Missense_Mutation SNP C C T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 10 82177222 82177222 C T SNP C10orf58 NM_032333 human genbank 54_36p +1 validated missense c.566 p.S189L 0.715 NULL superfamily_Thiordxn-like_fd - no_errors SEMA4D 10507 genome.wustl.edu 36 9 91185808 91185808 + Missense_Mutation SNP C C T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 9 91185808 91185808 C T SNP SEMA4D NM_006378 human genbank 54_36p -1 validated missense c.1645 p.D549N 0.049 HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold superfamily_Sema,HMMPfam_Sema,HMMSmart_Sema,HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig - no_errors MUC17 140453 genome.wustl.edu 36 7 100473618 100473618 + Silent SNP T T G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 7 100473618 100473618 T G SNP MUC17 NM_001040105 human genbank 54_36p +1 provisional silent c.12201 p.P4067 0.066 NULL superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA - no_errors STAB2 55576 genome.wustl.edu 36 12 102613523 102613523 + Missense_Mutation SNP G G T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 12 102613523 102613523 G T SNP STAB2 NM_017564 human genbank 54_36p +1 reviewed missense c.3441 p.M1147I 1.000 superfamily_BIgH3_FAS1 HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_alliinase,superfamily_SSF57196,HMMPfam_EGF,superfamily_BIgH3_FAS1,HMMPfam_Fasciclin,HMMSmart_FAS1,HMMPfam_Laminin_EGF,PatternScan_EGF_LAM_1,superfamily_Grow_fac_recept,HMMPfam_EGF_2,HMMSmart_LINK,HMMPfam_Xlink,superfamily_C-type_lectin_fold,PatternScan_LINK_1 - no_errors PPRC1 23082 genome.wustl.edu 36 10 103889903 103889903 + Missense_Mutation SNP G C C novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 10 103889903 103889903 G C SNP PPRC1 NM_015062 human genbank 54_36p +1 reviewed missense c.1648 p.A550P 0.072 NULL superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1 - no_errors GCC2 9648 genome.wustl.edu 36 2 108464615 108464615 + Missense_Mutation SNP G G C novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 2 108464615 108464615 G C SNP GCC2 NM_181453 human genbank 54_36p +1 reviewed missense c.3091 p.E1031Q 0.950 NULL HMMPfam_GRIP,HMMSmart_Grip - no_errors ZCCHC16 340595 genome.wustl.edu 36 X 111585322 111585322 + Missense_Mutation SNP C C T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac X 111585322 111585322 C T SNP ZCCHC16 NM_001004308 human genbank 54_36p +1 validated missense c.710 p.S237F 0.002 NULL HMMSmart_ZnF_C2HC - no_errors KIAA1958 158405 genome.wustl.edu 36 9 114461530 114461530 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 9 114461530 114461530 G A SNP KIAA1958 NM_133465 human genbank 54_36p +1 predicted missense c.1511 p.S504N 0.981 NULL NULL - no_errors LOC200810 200810 genome.wustl.edu 36 3 127132140 127132140 + Missense_Mutation SNP C C G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 3 127132140 127132140 C G SNP LOC200810 NM_001015050 human genbank 54_36p -1 predicted missense c.298 p.E100Q 1.000 NULL NULL - no_errors C3orf27 23434 genome.wustl.edu 36 3 129775246 129775246 + Missense_Mutation SNP T T A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 3 129775246 129775246 T A SNP C3orf27 NM_007354 human genbank 54_36p -1 provisional missense c.17 p.H6L 1.000 NULL NULL - no_errors PTGDS 5730 genome.wustl.edu 36 9 138991965 138991965 + Silent SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 9 138991965 138991965 G A SNP PTGDS NM_000954 human genbank 54_36p +1 reviewed silent c.114 p.K38 0.611 superfamily_Lipocalins,PatternScan_LIPOCALIN superfamily_Lipocalins,PatternScan_LIPOCALIN,HMMPfam_Lipocalin - no_errors ANAPC2 29882 genome.wustl.edu 36 9 139201762 139201762 + Silent SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 9 139201762 139201762 G A SNP ANAPC2 NM_013366 human genbank 54_36p -1 reviewed silent c.732 p.S244 1.000 NULL "HMMPfam_Cullin,superfamily_Cullin homology domain,HMMSmart_SM00182,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_APC2" - no_errors NRG2 9542 genome.wustl.edu 36 5 139212749 139212749 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 5 139212749 139212749 G A SNP NRG2 NM_013982 human genbank 54_36p -1 reviewed missense c.1364 p.P455L 0.914 HMMPfam_Neuregulin superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_Neuregulin - no_errors PCDHB3 56132 genome.wustl.edu 36 5 140462682 140462682 + Silent SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 5 140462682 140462682 G A SNP PCDHB3 NM_018937 human genbank 54_36p +1 reviewed silent c.2265 p.L755 0.355 NULL HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin - no_errors GPR172A 79581 genome.wustl.edu 36 8 145554158 145554158 + Silent SNP C C T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 8 145554158 145554158 C T SNP GPR172A NM_024531 human genbank 54_36p +1 validated silent c.198 p.T66 0.976 NULL HMMPfam_DUF1011 - no_errors GPR172A 79581 genome.wustl.edu 36 8 145554521 145554521 + Missense_Mutation SNP C C A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 8 145554521 145554521 C A SNP GPR172A NM_024531 human genbank 54_36p +1 validated missense c.561 p.F187L 0.001 NULL HMMPfam_DUF1011 - no_errors GPR172A 79581 genome.wustl.edu 36 8 145554562 145554562 + Missense_Mutation SNP C C G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 8 145554562 145554562 C G SNP GPR172A NM_024531 human genbank 54_36p +1 validated missense c.602 p.T201S 0.010 NULL HMMPfam_DUF1011 - no_errors GPR172A 79581 genome.wustl.edu 36 8 145554652 145554652 + Nonsense_Mutation SNP C C G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 8 145554652 145554652 C G SNP GPR172A NM_024531 human genbank 54_36p +1 validated nonsense c.692 p.S231* 0.000 NULL HMMPfam_DUF1011 - no_errors GPR172A 79581 genome.wustl.edu 36 8 145554863 145554863 + Silent SNP C C T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 8 145554863 145554863 C T SNP GPR172A NM_024531 human genbank 54_36p +1 validated silent c.903 p.S301 1.000 HMMPfam_DUF1011 HMMPfam_DUF1011 - no_errors LOC729497 729497 genome.wustl.edu 36 4 146764604 146764604 + RNA SNP C C G novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 4 146764604 146764604 C G SNP LOC729497 XR_015940 human genbank 54_36p -1 model rna NULL NULL 0.004 - - - pseudogene DLX2 1746 genome.wustl.edu 36 2 172673894 172673894 + Missense_Mutation SNP G G A novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 2 172673894 172673894 G A SNP DLX2 NM_004405 human genbank 54_36p -1 reviewed missense c.610 p.R204W 1.000 superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1 superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1 - no_errors ATP11B 23200 genome.wustl.edu 36 3 184058503 184058503 + Missense_Mutation SNP G G C novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 3 184058503 184058503 G C SNP ATP11B NM_014616 human genbank 54_36p +1 validated missense c.995 p.S332T 1.000 NULL HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660 - no_errors IPO9 55705 genome.wustl.edu 36 1 200064968 200064968 + Missense_Mutation SNP C C T novel unknown TCGA-36-2532-01A-01D-1526-09 TCGA-36-2532-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx 63680058-ad96-4f00-9dcb-a3b40d325b05 ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac 1 200064968 200064968 C T SNP IPO9 NM_018085 human genbank 54_36p +1 validated missense c.8 p.A3V 1.000 NULL superfamily_ARM repeat,HMMPfam_IBN_N - no_errors