Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MT-ND1	4535	genome.wustl.edu	36	MT	3771	3771	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	MT	3771	3771	T	C	SNP	MT-ND1	ENST00000361390	human	ensembl	54_36p	+1	known	missense	c.464	p.L155P	NULL	HMMPfam_NADHdh	HMMPfam_NADHdh,PatternScan_COMPLEX1_ND1_1,PatternScan_COMPLEX1_ND1_2	-	no_errors
ENSG00000210151	0	genome.wustl.edu	36	MT	7487	7487	+	RNA	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	MT	7487	7487	G	A	SNP	ENSG00000210151	ENST00000387416	human	ensembl	54_36p	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
MT-ND4	4538	genome.wustl.edu	36	MT	11494	11494	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	MT	11494	11494	G	A	SNP	MT-ND4	ENST00000361381	human	ensembl	54_36p	+1	known	missense	c.734	p.R245H	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region
MT-CYB	4519	genome.wustl.edu	36	MT	15310	15310	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	MT	15310	15310	T	C	SNP	MT-CYB	ENST00000361789	human	ensembl	54_36p	+1	known	missense	c.563	p.I188T	NULL	superfamily_Transmembr_di-haem_cytochrome,HMMPfam_Cytochrom_B_N	superfamily_Transmembr_di-haem_cytochrome,HMMPfam_Cytochrom_B_N,HMMPfam_Cytochrom_B_C,superfamily_Cytochrome_b/b6_C	-	no_stop_codon:bad_bp_length_for_coding_region
WNK1	65125	genome.wustl.edu	36	12	876048	876048	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	876048	876048	A	C	SNP	WNK1	NM_018979	human	genbank	54_36p	+1	validated	missense	c.6134	p.N2045T	0.508	NULL	superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors
IRX2	153572	genome.wustl.edu	36	5	2802663	2802663	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	5	2802663	2802663	G	T	SNP	IRX2	NM_033267	human	genbank	54_36p	-1	validated	missense	c.488	p.T163N	1.000	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMSmart_IRO	-	no_errors
FAM90A20	728430	genome.wustl.edu	36	8	7142884	7142884	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	8	7142884	7142884	C	T	SNP	FAM90A20	XM_001128051	human	genbank	54_36p	+1	model	silent	c.1323	p.V441	0.002	NULL	NULL	-	no_errors
ANKRD12	23253	genome.wustl.edu	36	18	9244628	9244628	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	18	9244628	9244628	C	G	SNP	ANKRD12	NM_015208	human	genbank	54_36p	+1	validated	missense	c.1363	p.Q455E	0.963	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
TYK2	7297	genome.wustl.edu	36	19	10333497	10333497	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	19	10333497	10333497	C	G	SNP	TYK2	NM_003331	human	genbank	54_36p	-1	reviewed	missense	c.1908	p.E636D	0.883	superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc	PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550,HMMSmart_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
FRAP1	2475	genome.wustl.edu	36	1	11139884	11139884	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	11139884	11139884	C	A	SNP	FRAP1	NM_004958	human	genbank	54_36p	-1	reviewed	missense	c.4381	p.V1461L	0.820	superfamily_ARM-type_fold,superfamily_SSF48452	superfamily_ARM-type_fold,superfamily_SSF48452,HMMPfam_FAT,HMMPfam_Rapamycin_bind,superfamily_FRAP_FKBP12_bind,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	-	no_errors
NMT2	9397	genome.wustl.edu	36	10	15215318	15215318	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	10	15215318	15215318	G	A	SNP	NMT2	NM_004808	human	genbank	54_36p	-1	reviewed	missense	c.442	p.R148C	0.964	superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_NMT	superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_NMT,PatternScan_NMT_1,HMMPfam_NMT_C,PatternScan_NMT_2	-	no_errors
SPEN	23013	genome.wustl.edu	36	1	16133384	16133384	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	16133384	16133384	G	A	SNP	SPEN	NM_015001	human	genbank	54_36p	+1	reviewed	missense	c.8062	p.G2688R	0.567	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1,superfamily_SPOC-like,HMMPfam_SPOC	-	no_errors
CTAGE1	64693	genome.wustl.edu	36	18	18249757	18249757	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	18	18249757	18249757	C	A	SNP	CTAGE1	NM_172241	human	genbank	54_36p	-1	validated	missense	c.2016	p.L672F	0.001	NULL	NULL	-	no_errors
NCAN	1463	genome.wustl.edu	36	19	19199174	19199174	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	19	19199174	19199174	C	G	SNP	NCAN	NM_004386	human	genbank	54_36p	+1	validated	missense	c.1745	p.A582G	0.000	NULL	superfamily_SSF48726,HMMSmart_IG,superfamily_C-type_lectin_fold,HMMSmart_LINK,HMMPfam_Xlink,PatternScan_LINK_1,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_CLECT,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	-	no_errors
LAMA3	3909	genome.wustl.edu	36	18	19653903	19653903	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	18	19653903	19653903	C	G	SNP	LAMA3	NM_198129	human	genbank	54_36p	+1	reviewed	missense	c.2248	p.P750A	1.000	NULL	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMSmart_SM00281,HMMPfam_Laminin_B,PatternScan_EGF_2,HMMPfam_Laminin_I,HMMPfam_Laminin_II,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_CHAPERONINS_CPN60	-	no_errors
MGC87895	644068	genome.wustl.edu	36	1	19807432	19807432	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	19807432	19807432	G	A	SNP	MGC87895	XM_930106	human	genbank	54_36p	+1	model	missense	c.238	p.D80N	1.000	superfamily_Translational machinery components,HMMPfam_Ribosomal_S11	superfamily_Translational machinery components,HMMPfam_Ribosomal_S11,PatternScan_RIBOSOMAL_S11	-	pseudogene
MLLT10	8028	genome.wustl.edu	36	10	22063056	22063056	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	10	22063056	22063056	G	A	SNP	MLLT10	NM_004641	human	genbank	54_36p	+1	validated	silent	c.2898	p.L966	0.879	NULL	superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1	-	no_errors
RPP21	79897	genome.wustl.edu	36	6	30422202	30422202	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	30422202	30422202	C	G	SNP	RPP21	NM_024839	human	genbank	54_36p	+1	provisional	missense	c.256	p.R86G	1.000	HMMPfam_Rpr2	HMMPfam_Rpr2	-	no_errors
KIAA1949	170954	genome.wustl.edu	36	6	30761298	30761298	+	Silent	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	30761298	30761298	G	T	SNP	KIAA1949	NM_133471	human	genbank	54_36p	-1	validated	silent	c.477	p.A159	0.001	NULL	NULL	-	no_errors
SETD1A	9739	genome.wustl.edu	36	16	30882376	30882376	+	Silent	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	16	30882376	30882376	G	C	SNP	SETD1A	NM_014712	human	genbank	54_36p	+1	provisional	silent	c.639	p.T213	1.000	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1,superfamily_SSF82199,HMMPfam_SET,HMMSmart_SET,HMMSmart_PostSET	-	no_errors
ITGAM	3684	genome.wustl.edu	36	16	31216348	31216348	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	16	31216348	31216348	T	C	SNP	ITGAM	NM_000632	human	genbank	54_36p	+1	reviewed	missense	c.1369	p.F457L	1.000	superfamily_SSF69318,HMMSmart_Int_alpha,HMMPfam_FG-GAP	superfamily_SSF69318,HMMSmart_Int_alpha,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_SSF69179,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors
STT3B	201595	genome.wustl.edu	36	3	31649587	31649587	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	3	31649587	31649587	G	C	SNP	STT3B	NM_178862	human	genbank	54_36p	+1	provisional	missense	c.2344	p.D782H	1.000	NULL	HMMPfam_STT3	-	no_errors
CTNNBL1	56259	genome.wustl.edu	36	20	35921759	35921759	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	20	35921759	35921759	G	C	SNP	CTNNBL1	NM_030877	human	genbank	54_36p	+1	reviewed	missense	c.1437	p.E479D	0.874	superfamily_ARM repeat	HMMPfam_DUF1716,superfamily_ARM repeat	-	no_errors
BAIAP2L2	80115	genome.wustl.edu	36	22	36823059	36823059	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	22	36823059	36823059	C	T	SNP	BAIAP2L2	NM_025045	human	genbank	54_36p	-1	validated	missense	c.538	p.E180K	1.000	HMMPfam_IMD	HMMPfam_IMD,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2	-	no_errors
LOC442668	442668	genome.wustl.edu	36	7	37591857	37591857	+	RNA	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	7	37591857	37591857	G	C	SNP	LOC442668	XR_017442	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.040	-	-	-	pseudogene
SCN11A	11280	genome.wustl.edu	36	3	38888745	38888745	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	3	38888745	38888745	G	C	SNP	SCN11A	NM_014139	human	genbank	54_36p	-1	validated	missense	c.3438	p.F1146L	0.996	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc	-	no_errors
RIT2	6014	genome.wustl.edu	36	18	38949393	38949393	+	Silent	SNP	T	T	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	18	38949393	38949393	T	G	SNP	RIT2	NM_002930	human	genbank	54_36p	-1	provisional	silent	c.90	p.G30	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174,HMMSmart_SM00176	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174,HMMSmart_SM00176	-	no_errors
PABPC4	8761	genome.wustl.edu	36	1	39802157	39802157	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	39802157	39802157	G	C	SNP	PABPC4	NM_003819	human	genbank	54_36p	-1	reviewed	missense	c.1430	p.A477G	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMSmart_SM00361,superfamily_PABC (PABP) domain,HMMPfam_PABP,HMMSmart_SM00517	-	no_errors
SLC20A2	6575	genome.wustl.edu	36	8	42406768	42406768	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	8	42406768	42406768	C	T	SNP	SLC20A2	NM_006749	human	genbank	54_36p	-1	provisional	silent	c.1680	p.G560	0.993	HMMPfam_PHO4	HMMPfam_PHO4	-	no_errors
CNPY3	10695	genome.wustl.edu	36	6	43010282	43010282	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	43010282	43010282	C	G	SNP	CNPY3	NM_006586	human	genbank	54_36p	+1	validated	missense	c.243	p.D81E	0.980	NULL	NULL	-	no_errors
RRP1B	23076	genome.wustl.edu	36	21	43928938	43928938	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	21	43928938	43928938	G	A	SNP	RRP1B	NM_015056	human	genbank	54_36p	+1	validated	missense	c.968	p.R323H	0.924	NULL	HMMPfam_Nop52	-	no_errors
LARS2	23395	genome.wustl.edu	36	3	45534562	45534562	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	3	45534562	45534562	C	G	SNP	LARS2	NM_015340	human	genbank	54_36p	+1	reviewed	missense	c.2208	p.I736M	0.042	superfamily_tRNAsyn_1a_bind,HMMPfam_Anticodon_1	superfamily_SSF52374,HMMPfam_tRNA-synt_1g,PatternScan_AA_TRNA_LIGASE_I,superfamily_ValRS_IleRS_edit,HMMPfam_tRNA-synt_1,superfamily_tRNAsyn_1a_bind,HMMPfam_Anticodon_1	-	no_errors
SOCS5	9655	genome.wustl.edu	36	2	46839495	46839495	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	46839495	46839495	C	G	SNP	SOCS5	NM_014011	human	genbank	54_36p	+1	reviewed	missense	c.322	p.L108V	0.996	NULL	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,HMMSmart_SM00253,HMMPfam_SOCS_box	-	no_errors
CYP4A11	1579	genome.wustl.edu	36	1	47172483	47172483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	47172483	47172483	C	T	SNP	CYP4A11	NM_000778	human	genbank	54_36p	-1	reviewed	missense	c.1040	p.C347Y	1.000	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
MAP4	4134	genome.wustl.edu	36	3	47932511	47932511	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	3	47932511	47932511	C	A	SNP	MAP4	NM_002375	human	genbank	54_36p	-1	reviewed	missense	c.1810	p.D604Y	0.149	NULL	HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
XRCC1	7515	genome.wustl.edu	36	19	48741889	48741889	+	Silent	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	19	48741889	48741889	C	G	SNP	XRCC1	NM_006297	human	genbank	54_36p	-1	reviewed	silent	c.1542	p.P514	0.957	NULL	HMMPfam_XRCC1_N,superfamily_Galactose-binding domain-like,superfamily_BRCT domain,HMMPfam_BRCT,HMMSmart_SM00292	-	no_errors
SLC25A20	788	genome.wustl.edu	36	3	48904505	48904505	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	3	48904505	48904505	C	T	SNP	SLC25A20	NM_000387	human	genbank	54_36p	-1	reviewed	missense	c.110	p.R37Q	1.000	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC4A8	9498	genome.wustl.edu	36	12	50154444	50154444	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	50154444	50154444	G	A	SNP	SLC4A8	NM_001039960	human	genbank	54_36p	+1	validated	nonsense	c.1956	p.W652*	1.000	HMMPfam_HCO3_cotransp	superfamily_Phoshotransferase/anion transport protein,HMMPfam_Band_3_cyto,HMMPfam_HCO3_cotransp	-	no_errors
PKHD1	5314	genome.wustl.edu	36	6	52008362	52008362	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	52008362	52008362	T	G	SNP	PKHD1	NM_138694	human	genbank	54_36p	-1	reviewed	missense	c.3214	p.K1072Q	0.947	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMSmart_SM00710,HMMPfam_G8,superfamily_Pectin lyase-like	-	no_errors
SMC1A	8243	genome.wustl.edu	36	X	53456683	53456683	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	X	53456683	53456683	A	G	SNP	SMC1A	NM_006306	human	genbank	54_36p	-1	reviewed	missense	c.746	p.I249T	1.000	HMMPfam_SMC_N,superfamily_SSF52540	HMMPfam_SMC_N,superfamily_SSF52540,superfamily_SMC_hinge,HMMPfam_SMC_hinge	-	no_errors
HUWE1	10075	genome.wustl.edu	36	X	53580174	53580174	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	X	53580174	53580174	T	A	SNP	HUWE1	NM_031407	human	genbank	54_36p	-1	validated	missense	c.12317	p.Y4106F	1.000	superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	HMMPfam_DUF908,superfamily_ARM repeat,HMMPfam_DUF913,superfamily_UBA-like,HMMPfam_UBA,HMMSmart_SM00165,HMMPfam_WWE,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors
TMEM48	55706	genome.wustl.edu	36	1	54006278	54006278	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	54006278	54006278	C	T	SNP	TMEM48	NM_018087	human	genbank	54_36p	-1	provisional	missense	c.1978	p.A660T	1.000	HMMPfam_Ndc1_Nup	HMMPfam_Ndc1_Nup	-	no_errors
FAM120C	54954	genome.wustl.edu	36	X	54116306	54116306	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	X	54116306	54116306	G	C	SNP	FAM120C	NM_017848	human	genbank	54_36p	-1	validated	missense	c.3176	p.S1059C	1.000	NULL	NULL	-	no_errors
GNL3L	54552	genome.wustl.edu	36	X	54603700	54603700	+	Silent	SNP	T	T	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	X	54603700	54603700	T	C	SNP	GNL3L	NM_019067	human	genbank	54_36p	+1	validated	silent	c.1689	p.S563	1.000	NULL	superfamily_SSF52540,HMMPfam_MMR_HSR1	-	no_errors
SKIV2L2	23517	genome.wustl.edu	36	5	54719678	54719678	+	Silent	SNP	A	A	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	5	54719678	54719678	A	G	SNP	SKIV2L2	NM_015360	human	genbank	54_36p	+1	validated	silent	c.2172	p.G724	1.000	NULL	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_DSHCT	-	no_errors
BSND	7809	genome.wustl.edu	36	1	55245406	55245406	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	55245406	55245406	C	G	SNP	BSND	NM_057176	human	genbank	54_36p	+1	reviewed	missense	c.421	p.L141V	0.001	NULL	NULL	-	no_errors
IL6ST	3572	genome.wustl.edu	36	5	55288850	55288850	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	5	55288850	55288850	A	G	SNP	IL6ST	NM_002184	human	genbank	54_36p	-1	reviewed	missense	c.1000	p.Y334H	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060	HMMPfam_Lep_receptor_Ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_L_F2	-	no_errors
OR5J1P	0	genome.wustl.edu	36	11	55595388	55595388	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	55595388	55595388	G	A	SNP	OR5J1P	ENST00000313544	human	ensembl	54_36p	+1	known	missense	c.307	p.V103I	0.001	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
LRP1	4035	genome.wustl.edu	36	12	55875411	55875411	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	55875411	55875411	G	T	SNP	LRP1	NM_002332	human	genbank	54_36p	+1	validated	missense	c.8399	p.C2800F	1.000	superfamily_YWTD domain,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,PatternScan_EGF_1	-	no_errors
CNGB1	1258	genome.wustl.edu	36	16	56508880	56508880	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	16	56508880	56508880	G	A	SNP	CNGB1	NM_001297	human	genbank	54_36p	-1	validated	silent	c.1959	p.N653	1.000	superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2	-	no_errors
ZNF451	26036	genome.wustl.edu	36	6	57121028	57121028	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	57121028	57121028	T	C	SNP	ZNF451	NM_001031623	human	genbank	54_36p	+1	validated	missense	c.2186	p.I729T	0.972	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
LOC341689	341689	genome.wustl.edu	36	13	58003065	58003065	+	RNA	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	13	58003065	58003065	C	T	SNP	LOC341689	XR_017487	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.878	-	-	-	no_errors
SERPINB5	5268	genome.wustl.edu	36	18	59305216	59305216	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	18	59305216	59305216	G	A	SNP	SERPINB5	NM_002639	human	genbank	54_36p	+1	validated	missense	c.226	p.D76N	0.991	HMMPfam_Serpin,superfamily_Serpins,HMMSmart_SM00093	HMMPfam_Serpin,superfamily_Serpins,HMMSmart_SM00093,PatternScan_SERPIN	-	no_errors
PTK6	5753	genome.wustl.edu	36	20	61634402	61634402	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	20	61634402	61634402	G	A	SNP	PTK6	NM_005975	human	genbank	54_36p	-1	reviewed	silent	c.753	p.Y251	0.966	superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
ATL3	25923	genome.wustl.edu	36	11	63176609	63176609	+	Silent	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	63176609	63176609	C	G	SNP	ATL3	NM_015459	human	genbank	54_36p	-1	validated	silent	c.420	p.L140	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	-	no_errors
LOC644578	644578	genome.wustl.edu	36	4	63899065	63899065	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	4	63899065	63899065	T	C	SNP	LOC644578	XM_927694	human	genbank	54_36p	+1	model	missense	c.803	p.L268P	1.000	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00715,HMMPfam_La"	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00715,HMMPfam_La"	-	no_errors
ZBTB25	7597	genome.wustl.edu	36	14	64024371	64024371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	14	64024371	64024371	C	T	SNP	ZBTB25	NM_006977	human	genbank	54_36p	-1	validated	missense	c.331	p.A111T	0.983	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF117	7670	genome.wustl.edu	36	7	64076013	64076013	+	Silent	SNP	A	A	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	7	64076013	64076013	A	C	SNP	ZNF117	NM_015852	human	genbank	54_36p	-1	validated	silent	c.1371	p.S457	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SPDYC	387778	genome.wustl.edu	36	11	64697246	64697246	+	Silent	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	64697246	64697246	G	T	SNP	SPDYC	NM_001008778	human	genbank	54_36p	+1	provisional	silent	c.864	p.P288	0.000	NULL	NULL	-	no_errors
PTPRR	5801	genome.wustl.edu	36	12	69378350	69378350	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	69378350	69378350	C	T	SNP	PTPRR	NM_002849	human	genbank	54_36p	-1	reviewed	missense	c.1241	p.R414H	1.000	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
UBE2O	63893	genome.wustl.edu	36	17	71903448	71903448	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	17	71903448	71903448	T	C	SNP	UBE2O	NM_022066	human	genbank	54_36p	-1	validated	missense	c.2899	p.T967A	0.995	superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con	PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con	-	no_errors
ZNF236	7776	genome.wustl.edu	36	18	72749489	72749489	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	18	72749489	72749489	G	C	SNP	ZNF236	NM_007345	human	genbank	54_36p	+1	validated	missense	c.2517	p.L839F	0.421	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SNUPN	10073	genome.wustl.edu	36	15	73677903	73677903	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	15	73677903	73677903	G	C	SNP	SNUPN	NM_001042581	human	genbank	54_36p	-1	reviewed	missense	c.934	p.H312D	1.000	NULL	NULL	-	no_errors
LTBP2	4053	genome.wustl.edu	36	14	74045781	74045781	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	14	74045781	74045781	C	T	SNP	LTBP2	NM_000428	human	genbank	54_36p	-1	reviewed	missense	c.3316	p.G1106R	0.068	PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,HMMPfam_EGF,superfamily_Growth factor receptor domain	-	no_errors
TNNI3K	51086	genome.wustl.edu	36	1	74607743	74607743	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	74607743	74607743	A	T	SNP	TNNI3K	NM_015978	human	genbank	54_36p	+1	validated	missense	c.1553	p.H518L	1.000	superfamily_Kinase_like,HMMPfam_Pkinase_Tyr	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
PRKRIR	5612	genome.wustl.edu	36	11	75740716	75740716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	75740716	75740716	C	T	SNP	PRKRIR	NM_004705	human	genbank	54_36p	-1	provisional	missense	c.1126	p.G376R	0.997	NULL	HMMPfam_THAP,HMMSmart_SM00692,HMMPfam_hATC	-	no_errors
CCDC137	339230	genome.wustl.edu	36	17	77247669	77247669	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	17	77247669	77247669	C	T	SNP	CCDC137	NM_199287	human	genbank	54_36p	+1	validated	missense	c.278	p.T93I	0.959	NULL	NULL	-	no_errors
LRRTM4	80059	genome.wustl.edu	36	2	77599962	77599962	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	77599962	77599962	G	A	SNP	LRRTM4	NM_024993	human	genbank	54_36p	-1	provisional	missense	c.541	p.R181W	1.000	superfamily_SSF52058	HMMSmart_LRRNT,superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1	-	no_errors
ZNF750	79755	genome.wustl.edu	36	17	78381491	78381491	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	17	78381491	78381491	C	T	SNP	ZNF750	NM_024702	human	genbank	54_36p	-1	reviewed	missense	c.1988	p.C663Y	0.000	NULL	HMMSmart_ZnF_C2H2	-	no_errors
RBM26	64062	genome.wustl.edu	36	13	78849644	78849644	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	13	78849644	78849644	C	T	SNP	RBM26	NM_022118	human	genbank	54_36p	-1	validated	silent	c.198	p.Q66	1.000	superfamily_SSF101233	superfamily_SSF101233,HMMPfam_DUF1777,HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,superfamily_SSF54928,HMMSmart_RRM	-	no_errors
KCNK10	54207	genome.wustl.edu	36	14	87724064	87724064	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	14	87724064	87724064	C	G	SNP	KCNK10	NM_138317	human	genbank	54_36p	-1	reviewed	missense	c.1011	p.E337D	1.000	superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans_2	-	no_errors
KERA	11081	genome.wustl.edu	36	12	89973429	89973429	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	89973429	89973429	A	G	SNP	KERA	NM_007035	human	genbank	54_36p	-1	validated	missense	c.761	p.L254P	0.994	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1	-	no_errors
MTNR1B	4544	genome.wustl.edu	36	11	92354349	92354349	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	92354349	92354349	C	T	SNP	MTNR1B	NM_005959	human	genbank	54_36p	+1	reviewed	silent	c.312	p.D104	0.226	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
LOC440311	440311	genome.wustl.edu	36	15	93200486	93200486	+	RNA	SNP	C	T	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	15	93200486	93200486	C	T	SNP	LOC440311	XR_016779	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.886	-	-	-	pseudogene
ABCA4	24	genome.wustl.edu	36	1	94267592	94267592	+	Silent	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	94267592	94267592	G	T	SNP	ABCA4	NM_000350	human	genbank	54_36p	-1	reviewed	silent	c.4536	p.P1512	0.085	NULL	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
GPR120	338557	genome.wustl.edu	36	10	95337009	95337009	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	10	95337009	95337009	T	G	SNP	GPR120	NM_181745	human	genbank	54_36p	+1	validated	missense	c.787	p.Y263D	0.372	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
NEDD1	121441	genome.wustl.edu	36	12	95853005	95853005	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	95853005	95853005	G	T	SNP	NEDD1	NM_152905	human	genbank	54_36p	+1	validated	missense	c.610	p.V204L	0.990	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
DPYD	1806	genome.wustl.edu	36	1	97812063	97812063	+	Silent	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	97812063	97812063	G	T	SNP	DPYD	NM_000110	human	genbank	54_36p	-1	reviewed	silent	c.1180	p.R394	1.000	superfamily_SSF51971,HMMPfam_Pyr_redox_2	superfamily_Helical_ferredxn,superfamily_SSF51971,HMMPfam_Pyr_redox_2,superfamily_SSF51395,HMMPfam_DHO_dh,superfamily_SSF54862,HMMPfam_Fer4,PatternScan_4FE4S_FER_1	-	no_errors
FRRS1	391059	genome.wustl.edu	36	1	99950608	99950608	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	99950608	99950608	G	A	SNP	FRRS1	NM_001013660	human	genbank	54_36p	-1	validated	missense	c.1375	p.L459F	1.000	HMMSmart_B561	HMMPfam_Reeler,HMMPfam_DOMON,HMMSmart_DoH,HMMSmart_B561	-	no_errors
BTK	695	genome.wustl.edu	36	X	100504323	100504323	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	X	100504323	100504323	G	A	SNP	BTK	NM_000061	human	genbank	54_36p	-1	reviewed	silent	c.402	p.Y134	1.000	superfamily_SSF50729,HMMSmart_PH	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMSmart_BTK,HMMPfam_BTK,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
OLFM3	118427	genome.wustl.edu	36	1	102063308	102063308	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	102063308	102063308	G	C	SNP	OLFM3	NM_058170	human	genbank	54_36p	-1	validated	missense	c.454	p.Q152E	1.000	NULL	HMMPfam_OLF,HMMSmart_SM00284	-	no_errors
UBE2D3	7323	genome.wustl.edu	36	4	103950104	103950104	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	4	103950104	103950104	C	T	SNP	UBE2D3	NM_181893	human	genbank	54_36p	-1	reviewed	missense	c.50	p.R17H	1.000	superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con	superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con,PatternScan_UBIQUITIN_CONJUGAT_1	-	no_errors
APPL2	55198	genome.wustl.edu	36	12	104092235	104092235	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	104092235	104092235	T	A	SNP	APPL2	NM_018171	human	genbank	54_36p	-1	validated	missense	c.1982	p.E661V	1.000	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_PID	-	no_errors
SRPK2	6733	genome.wustl.edu	36	7	104570994	104570994	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	7	104570994	104570994	T	G	SNP	SRPK2	NM_182692	human	genbank	54_36p	-1	validated	missense	c.833	p.N278T	1.000	superfamily_Kinase_like,HMMPfam_Pkinase	superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
EXPH5	23086	genome.wustl.edu	36	11	107914973	107914973	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	107914973	107914973	A	T	SNP	EXPH5	NM_015065	human	genbank	54_36p	-1	validated	missense	c.431	p.L144Q	0.000	NULL	NULL	-	no_errors
CARKD	55739	genome.wustl.edu	36	13	110085052	110085052	+	Silent	SNP	C	T	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	13	110085052	110085052	C	T	SNP	CARKD	NM_018210	human	genbank	54_36p	+1	validated	silent	c.579	p.A193	0.998	superfamily_SSF53613,HMMPfam_Carb_kinase	superfamily_SSF53613,HMMPfam_Carb_kinase	-	no_errors
ELOVL6	79071	genome.wustl.edu	36	4	111192086	111192086	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	4	111192086	111192086	A	G	SNP	ELOVL6	NM_024090	human	genbank	54_36p	-1	validated	missense	c.655	p.W219R	1.000	HMMPfam_ELO	HMMPfam_ELO,PatternScan_ELO	-	no_errors
CSMD3	114788	genome.wustl.edu	36	8	114100544	114100544	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	8	114100544	114100544	T	G	SNP	CSMD3	NM_198123	human	genbank	54_36p	-1	validated	missense	c.958	p.K320Q	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors
TSHB	7252	genome.wustl.edu	36	1	115378364	115378364	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	115378364	115378364	C	T	SNP	TSHB	NM_000549	human	genbank	54_36p	+1	validated	missense	c.410	p.S137F	0.818	NULL	HMMSmart_SM00068,HMMPfam_Cys_knot,superfamily_Cystine-knot cytokines,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_GLYCO_HORMONE_BETA_2	-	no_errors
CEP164	22897	genome.wustl.edu	36	11	116785629	116785629	+	Silent	SNP	C	C	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	116785629	116785629	C	A	SNP	CEP164	NM_014956	human	genbank	54_36p	+1	validated	silent	c.3834	p.V1278	0.035	NULL	superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW	-	no_errors
ODZ1	10178	genome.wustl.edu	36	X	123345830	123345830	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	X	123345830	123345830	C	G	SNP	ODZ1	NM_014253	human	genbank	54_36p	-1	provisional	missense	c.6611	p.R2204T	1.000	NULL	HMMPfam_Ten_N,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_SSF57196,superfamily_SSF101898,HMMPfam_NHL,superfamily_N2O_reductase_N,HMMPfam_RHS_repeat	-	no_errors
UROS	7390	genome.wustl.edu	36	10	127495040	127495040	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	10	127495040	127495040	T	G	SNP	UROS	NM_000375	human	genbank	54_36p	-1	reviewed	missense	c.19	p.K7Q	0.977	superfamily_Uroporphyrinogen III synthase (U3S HemD)	superfamily_Uroporphyrinogen III synthase (U3S HemD),HMMPfam_HEM4,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors
C6orf190	387357	genome.wustl.edu	36	6	128176099	128176099	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	128176099	128176099	C	T	SNP	C6orf190	NM_001010923	human	genbank	54_36p	-1	validated	silent	c.1380	p.K460	1.000	NULL	NULL	-	no_errors
OPCML	4978	genome.wustl.edu	36	11	132032305	132032305	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	11	132032305	132032305	G	T	SNP	OPCML	NM_002545	human	genbank	54_36p	-1	reviewed	missense	c.287	p.T96N	1.000	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_I-set,HMMPfam_ig	-	no_errors
C10orf92	54777	genome.wustl.edu	36	10	134510755	134510755	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	10	134510755	134510755	T	G	SNP	C10orf92	ENST00000263170	human	ensembl	54_36p	-1	known	missense	c.496	p.T166P	0.000	NULL	NULL	-	no_errors
SURF4	6836	genome.wustl.edu	36	9	135221721	135221721	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	9	135221721	135221721	T	A	SNP	SURF4	NM_033161	human	genbank	54_36p	-1	reviewed	missense	c.359	p.N120I	1.000	HMMPfam_SURF4	HMMPfam_SURF4,PatternScan_SURF4	-	no_errors
DARS	1615	genome.wustl.edu	36	2	136386560	136386560	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	136386560	136386560	C	A	SNP	DARS	NM_001349	human	genbank	54_36p	-1	validated	missense	c.1196	p.R399I	1.000	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases	superfamily_Nucleic acid-binding proteins,HMMPfam_tRNA_anti,HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases	-	no_errors
AGK	55750	genome.wustl.edu	36	7	140968038	140968038	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	7	140968038	140968038	G	C	SNP	AGK	NM_018238	human	genbank	54_36p	+1	validated	missense	c.556	p.E186Q	1.000	HMMPfam_DAGK_cat,HMMSmart_SM00046	HMMPfam_DAGK_cat,HMMSmart_SM00046	-	no_errors
CYP11B1	1584	genome.wustl.edu	36	8	143953690	143953690	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	8	143953690	143953690	A	T	SNP	CYP11B1	NM_000497	human	genbank	54_36p	-1	reviewed	missense	c.1162	p.S388T	0.087	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
SASH1	23328	genome.wustl.edu	36	6	148906935	148906935	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	148906935	148906935	C	T	SNP	SASH1	NM_015278	human	genbank	54_36p	+1	validated	missense	c.2636	p.A879V	0.000	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-	no_errors
IQGAP3	128239	genome.wustl.edu	36	1	154780595	154780595	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	154780595	154780595	C	T	SNP	IQGAP3	NM_178229	human	genbank	54_36p	-1	validated	silent	c.2433	p.L811	0.874	superfamily_SSF52540,HMMSmart_IQ,HMMPfam_IQ	superfamily_Calponin-homology,HMMPfam_CH,HMMSmart_CH,HMMSmart_IQ,superfamily_SSF52540,HMMPfam_IQ,superfamily_Rho_GAP,HMMSmart_RasGAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1,HMMPfam_RasGAP_C	-	no_errors
HAPLN2	60484	genome.wustl.edu	36	1	154860335	154860335	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	154860335	154860335	C	A	SNP	HAPLN2	NM_021817	human	genbank	54_36p	+1	validated	nonsense	c.198	p.Y66*	1.000	HMMPfam_V-set,HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00406	HMMPfam_V-set,HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00406,HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	-	no_errors
PLCH1	23007	genome.wustl.edu	36	3	156697890	156697890	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	3	156697890	156697890	G	A	SNP	PLCH1	NM_014996	human	genbank	54_36p	-1	validated	nonsense	c.1717	p.R573*	0.996	superfamily_PLC-like_Pdiesterase_TIM-brl	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_SSF47473,HMMPfam_efhand_like,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
KCNH7	90134	genome.wustl.edu	36	2	162965117	162965117	+	Silent	SNP	G	G	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	162965117	162965117	G	C	SNP	KCNH7	NM_033272	human	genbank	54_36p	-1	reviewed	silent	c.2235	p.A745	0.995	superfamily_cAMP-binding domain-like,HMMSmart_SM00100	superfamily_PYP-like sensor domain (PAS domain),superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	-	no_errors
DUSP27	92235	genome.wustl.edu	36	1	165361676	165361676	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	165361676	165361676	C	T	SNP	DUSP27	NM_001080426	human	genbank	54_36p	+1	provisional	silent	c.684	p.G228	0.856	superfamily_SSF52799,HMMPfam_DSPc,HMMSmart_DSPc	PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF52799,HMMPfam_DSPc,HMMSmart_DSPc	-	no_errors
WWC1	23286	genome.wustl.edu	36	5	167759117	167759117	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	5	167759117	167759117	A	C	SNP	WWC1	NM_015238	human	genbank	54_36p	+1	provisional	missense	c.557	p.Q186P	1.000	NULL	superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
XIRP2	129446	genome.wustl.edu	36	2	167808356	167808356	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	167808356	167808356	C	T	SNP	XIRP2	NM_152381	human	genbank	54_36p	+1	validated	silent	c.2208	p.F736	1.000	HMMPfam_Xin	HMMPfam_Xin	-	no_errors
ITGA6	3655	genome.wustl.edu	36	2	173077150	173077150	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	173077150	173077150	A	G	SNP	ITGA6	NM_001079818	human	genbank	54_36p	+1	reviewed	missense	c.3200	p.K1067R	1.000	NULL	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA	-	no_errors
PDE11A	50940	genome.wustl.edu	36	2	178644816	178644816	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	178644816	178644816	G	T	SNP	PDE11A	NM_016953	human	genbank	54_36p	-1	reviewed	missense	c.595	p.H199N	1.000	superfamily_GAF domain-like	superfamily_GAF domain-like,HMMPfam_GAF,HMMSmart_SM00065,superfamily_HD-domain/PDEase-like,HMMSmart_SM00471,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179287976	179287976	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	179287976	179287976	C	T	SNP	TTN	ENST00000375038	human	ensembl	54_36p	-1	known	missense	c.22450	p.G7484S	0.001	superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like,superfamily_WD40 repeat-like,superfamily_Positive stranded ssRNA viruses,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00406	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like,superfamily_WD40 repeat-like,superfamily_Positive stranded ssRNA viruses,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
GNB4	59345	genome.wustl.edu	36	3	180617019	180617019	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	3	180617019	180617019	G	T	SNP	GNB4	NM_021629	human	genbank	54_36p	-1	reviewed	missense	c.223	p.Q75K	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
CERKL	375298	genome.wustl.edu	36	2	182121772	182121772	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	2	182121772	182121772	A	C	SNP	CERKL	NM_201548	human	genbank	54_36p	-1	validated	missense	c.953	p.F318C	1.000	NULL	HMMPfam_DAGK_cat	-	no_errors
TRIML1	339976	genome.wustl.edu	36	4	189305425	189305425	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	4	189305425	189305425	C	T	SNP	TRIML1	NM_178556	human	genbank	54_36p	+1	provisional	nonsense	c.1312	p.Q438*	0.945	HMMPfam_SPRY,HMMSmart_SPRY	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors
OR13G1	441933	genome.wustl.edu	36	1	245902645	245902645	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	1	245902645	245902645	C	T	SNP	OR13G1	NM_001005487	human	genbank	54_36p	-1	provisional	missense	c.322	p.E108K	0.398	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
STRAP	11171	genome.wustl.edu	36	12	15934212	15934212	+	Splice_Site	DEL	T	T	-	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	12	15934212	15934212	T	-	DEL	STRAP	NM_007178	human	genbank	54_36p	+1	validated	splice_site_del	c.330+2	e3+2	1.000	-	-	(deletion:intron[15934211,15934797])	no_errors
DSC1	1823	genome.wustl.edu	36	18	26973708	26973714	+	Splice_Site	DEL	CCTGCAT	CCTGCAT	-	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	CCTGCAT	CCTGCAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	18	26973708	26973714	CCTGCAT	-	DEL	DSC1	NM_024421	human	genbank	54_36p	-1	reviewed	splice_site_del	c.1663+7_1663+1	e12-1	0.988:0.816:0.797:0.777:0.750:0.789:0.794	-	-	(deletion:intron[26968746,26973708], cds_exon[26973709,26973851])	no_errors
LOC441722	441722	genome.wustl.edu	36	15	33172634	33172636	+	In_Frame_Del	DEL	CCA	CCA	-	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	CCA	CCA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	15	33172634	33172636	CCA	-	DEL	LOC441722	XM_497450	human	genbank	54_36p	+1	model	in_frame_del	c.661_663	p.P221in_frame_del	0.992:0.999:1.000	NULL	superfamily_CCCH zinc finger,HMMPfam_zf-CCCH,HMMSmart_SM00356,superfamily_RNA-binding domain RBD,HMMSmart_SM00361	(deletion:cds_exon[33171974,33172705])	no_errors
FAM75A6	0	genome.wustl.edu	36	9	43564982	43564986	+	Frame_Shift_Del	DEL	TTCTG	TTCTG	-	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	TTCTG	TTCTG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	9	43564982	43564986	TTCTG	-	DEL	FAM75A6	ENST00000332857	human	ensembl	54_36p	-1	known	frame_shift_del	c.3701_3697	p.Q1233fs	0.002:0.001:0.002:0.001:0.001	NULL	NULL	(deletion:cds_exon[43564651,43568374])	no_errors
POT1	25913	genome.wustl.edu	36	7	124252619	124252631	+	Frame_Shift_Del	DEL	TCTGATGCTGGAA	TCTGATGCTGGAA	-	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	TCTGATGCTGGAA	TCTGATGCTGGAA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	7	124252619	124252631	TCTGATGCTGGAA	-	DEL	POT1	NM_015450	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.1715_1703	p.I568fs	0.970:0.995:0.997:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000	NULL	superfamily_Nucleic acid-binding proteins,HMMPfam_Telo_bind	(deletion:cds_exon[124252542,124252647])	no_errors
LAMA2	3908	genome.wustl.edu	36	6	129808656	129808664	+	Frame_Shift_Del	DEL	TTCTGTAAG	TTCTGTAAG	-	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	TTCTGTAAG	TTCTGTAAG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	6	129808656	129808664	TTCTGTAAG	-	DEL	LAMA2	NM_000426	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.6426_6429	p.N2142fs	1.000:1.000:1.000:0.999	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_II	HMMSmart_LamNT,HMMPfam_Laminin_N,superfamily_Gal_bind_like,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_ConA_like_lec_gl,PatternScan_EGF_1,PatternScan_EGF_LAM_1,superfamily_SSF57196,PatternScan_EGF_2,HMMSmart_LamB,HMMPfam_Laminin_B,HMMPfam_Laminin_I,superfamily_SSF56399,HMMPfam_Laminin_II,HMMSmart_LamG,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	(deletion:cds_exon[129808505,129808659], intron[129808660,129815825])	no_errors
TOP1MT	116447	genome.wustl.edu	36	8	144478981	144478983	+	In_Frame_Del	DEL	GGC	GGC	-	novel	unknown	TCGA-61-1907-01A-01W-0639-09	TCGA-61-1907-11A-01W-0640-09	GGC	GGC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7c50e035-7786-4766-b151-7915a077be43	9c90329c-f516-46bc-b797-cc2ef0003ff5	8	144478981	144478983	GGC	-	DEL	TOP1MT	NM_052963	human	genbank	54_36p	-1	reviewed	in_frame_del	c.581_579	p.P194in_frame_del	0.999:1.000:0.990	superfamily_TopoI_DNA_bd_euk,HMMPfam_Topoisom_I_N	superfamily_TopoI_DNA_bd_euk,HMMPfam_Topoisom_I_N,HMMSmart_TOPEUc,superfamily_DNA_brk_join_enz,HMMPfam_Topoisom_I,superfamily_Topismrse_insert,PatternScan_TOPOISOMERASE_I_EUK	(deletion:cds_exon[144478891,144479078])	no_errors