Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
RGPD3	653489	broad.mit.edu	37	2	107049631	107049631	+	Silent	SNP	C	C	T			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr2:107049631C>T	ENST00000409886.3	-	16	2403	c.2316G>A	c.(2314-2316)gcG>gcA	p.A772A	RGPD3_ENST00000304514.7_Silent_p.A772A	NM_001144013.1	NP_001137485.1	A6NKT7	RGPD3_HUMAN	RANBP2-like and GRIP domain containing 3	772					intracellular transport		binding	p.A772A(4)		breast(2)|central_nervous_system(1)|endometrium(50)|kidney(4)|lung(11)|ovary(1)|urinary_tract(2)	71						TTTCTGAATCCGCATTTCGCA	0.373000													5	317					0	0	1	0	0
NBPF10	100132406	broad.mit.edu	37	1	145302714	145302714	+	Silent	SNP	A	A	G	rs9424867		TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr1:145302714A>G	ENST00000342960.5	+	8	1187	c.1152A>G	c.(1150-1152)ttA>ttG	p.L384L	NBPF10_ENST00000369339.2_Silent_p.L113L|RP11-458D21.5_ENST00000468030.1_3'UTR|NBPF10_ENST00000369338.1_Silent_p.L113L	NM_001039703.4	NP_001034792.4	A6NDV3	A6NDV3_HUMAN	neuroblastoma breakpoint family, member 10	384								p.L113L(3)|p.L384L(3)		NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		AGGAGAAGTTACGGGAAGGGA	0.527000													5	47					0	0	1	0	0
HRAS	3265	broad.mit.edu	37	11	533874	533874	+	Missense_Mutation	SNP	T	T	C	rs121913233		TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr11:533874T>C	ENST00000417302.1	-	3	369	c.182A>G	c.(181-183)cAg>cGg	p.Q61R	HRAS_ENST00000311189.7_Missense_Mutation_p.Q61R|HRAS_ENST00000451590.1_Missense_Mutation_p.Q61R|HRAS_ENST00000397594.1_Missense_Mutation_p.Q61R|HRAS_ENST00000397596.2_Missense_Mutation_p.Q61R|HRAS_ENST00000468682.2_5'UTR	NM_176795.3	NP_789765.1	P01112	RASH_HUMAN	Harvey rat sarcoma viral oncogene homolog	61			Q -> K (in follicular thyroid carcinoma samples; somatic mutation; increases transformation of cultured cell lines; dbSNP:rs28933406).|Q -> L (in melanoma; strongly reduced GTP hydrolysis in the presence of RAF1; increases transformation of cultured cell lines).		activation of MAPKK activity|axon guidance|blood coagulation|cell cycle arrest|cellular senescence|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|mitotic cell cycle G1/S transition checkpoint|negative regulation of cell proliferation|nerve growth factor receptor signaling pathway|organ morphogenesis|positive regulation of DNA replication|positive regulation of epithelial cell proliferation|Ras protein signal transduction|synaptic transmission	cytosol|Golgi membrane|plasma membrane	GTP binding|GTPase activity|protein C-terminus binding	p.Q61R(136)|p.Q61L(117)|p.Q61P(3)		adrenal_gland(1)|bone(3)|breast(7)|cervix(23)|endometrium(4)|haematopoietic_and_lymphoid_tissue(12)|kidney(1)|large_intestine(2)|liver(1)|lung(16)|oesophagus(2)|penis(2)|pituitary(10)|prostate(31)|salivary_gland(24)|skin(184)|soft_tissue(38)|stomach(14)|testis(5)|thymus(1)|thyroid(173)|upper_aerodigestive_tract(122)|urinary_tract(225)	901		all_cancers(49;4.37e-09)|all_epithelial(84;2.09e-06)|Breast(177;0.000162)|Ovarian(85;0.000953)|Medulloblastoma(188;0.0109)|all_neural(188;0.0299)|Lung NSC(207;0.0538)|all_lung(207;0.0713)		all cancers(45;7.63e-28)|Epithelial(43;7.29e-27)|OV - Ovarian serous cystadenocarcinoma(40;7.15e-21)|BRCA - Breast invasive adenocarcinoma(625;3.56e-05)|Lung(200;0.0375)|LUSC - Lung squamous cell carcinoma(625;0.0703)	Sulindac(DB00605)	GTACTCCTCCTGGCCGGCGGT	0.597000	Q61L(KNS62_LUNG)|Q61L(KYSE30_OESOPHAGUS)|Q61L(NCIH1915_LUNG)	6	Mis		"""infrequent sarcomas, rare other types"""	"""rhadomyosarcoma, ganglioneuroblastoma, bladder"""			Costello syndrome	HNSCC(11;0.0054)			57	10					0	0	1	0	0
ERCC6-PGBD3	101243544	broad.mit.edu	37	10	50724947	50724947	+	Missense_Mutation	SNP	C	C	T			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr10:50724947C>T	ENST00000515869.1	-	6	1738	c.1618G>A	c.(1618-1620)Gag>Aag	p.E540K	PGBD3_ENST00000508005.2_Missense_Mutation_p.E72K|PGBD3_ENST00000374127.3_Missense_Mutation_p.E72K|ERCC6-PGBD3_ENST00000447839.2_Missense_Mutation_p.E540K|PGBD3_ENST00000603152.1_Missense_Mutation_p.E540K|ERCC6_ENST00000355832.5_Intron	NM_001277059.1	NP_001263988.1																					GAGTCAGACTCAGCATCAGAG	0.453000													6	95					0	0	1	0	0
MIR654	724024	broad.mit.edu	37	14	101506628	101506628	+	RNA	SNP	T	T	C			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr14:101506628T>C	ENST00000385199.1	+	0	73					NR_030390.1																						CCATCACCTTTAGAAGCCCCC	0.557000													6	10					0	0	1	0	0
WASH3P	374666	broad.mit.edu	37	15	102516511	102516511	+	RNA	SNP	C	C	T			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr15:102516511C>T	ENST00000557932.1	+	0	1459																				central_nervous_system(1)|endometrium(6)|kidney(11)|prostate(5)|stomach(1)|urinary_tract(1)	25						AGACTTGGGCCGTTGCTCTGA	0.627000													4	56					0	0	1	0	0
BAGE2	85319	broad.mit.edu	37	21	11058353	11058353	+	RNA	SNP	T	T	C	rs79433933	by1000genomes	TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr21:11058353T>C	ENST00000470054.1	-	0	324									B melanoma antigen family, member 2															Colorectal(6;3.44e-05)|COAD - Colon adenocarcinoma(6;0.00727)|READ - Rectum adenocarcinoma(6;0.0723)	UCEC - Uterine corpus endometrioid carcinoma (6;0.0974)|all cancers(6;2.54e-22)|Epithelial(6;4.21e-19)|OV - Ovarian serous cystadenocarcinoma(6;1.16e-09)|BRCA - Breast invasive adenocarcinoma(6;7.72e-05)|Lung(8;0.000189)|LUSC - Lung squamous cell carcinoma(6;0.00379)|GBM - Glioblastoma multiforme(6;0.00391)|Kidney(17;0.0773)|LUAD - Lung adenocarcinoma(8;0.247)		GAAATCTCTTTATAAAACCTT	0.343000													4	106					0	0	1	0	0
DDC	1644	broad.mit.edu	37	7	50595871	50595871	+	Silent	SNP	C	C	T			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr7:50595871C>T	ENST00000444124.2	-	6	878	c.678G>A	c.(676-678)ctG>ctA	p.L226L	DDC_ENST00000380984.4_Silent_p.L226L|DDC_ENST00000431062.1_Intron|DDC_ENST00000426377.1_Silent_p.L148L|DDC_ENST00000489162.1_5'UTR|DDC_ENST00000357936.5_Silent_p.L226L	NM_001082971.1	NP_001076440.1	P20711	DDC_HUMAN	dopa decarboxylase (aromatic L-amino acid decarboxylase)	226					cellular amino acid metabolic process|hormone biosynthetic process|neurotransmitter secretion	cytosol	aromatic-L-amino-acid decarboxylase activity|protein binding|pyridoxal phosphate binding			breast(1)|endometrium(4)|kidney(3)|large_intestine(2)|lung(23)|ovary(4)|skin(2)|stomach(1)	40	Glioma(55;0.08)|all_neural(89;0.245)				Amantadine(DB00915)|Carbidopa(DB00190)|Flupenthixol(DB00875)|L-Tryptophan(DB00150)|Levodopa(DB01235)|Pimozide(DB01100)|Pyridoxal Phosphate(DB00114)|Remoxipride(DB00409)	TGTCTCTCTCCAGGGCTTCCT	0.512000													12	53					0	0	1	0	0
ABCA13	154664	broad.mit.edu	37	7	48314803	48314803	+	Missense_Mutation	SNP	T	T	G			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr7:48314803T>G	ENST00000435803.1	+	17	5564	c.5540T>G	c.(5539-5541)aTg>aGg	p.M1847R		NM_152701.3	NP_689914.2	Q86UQ4	ABCAD_HUMAN	ATP-binding cassette, sub-family A (ABC1), member 13	1847					transport	integral to membrane	ATP binding|ATPase activity			breast(13)|central_nervous_system(8)|endometrium(25)|haematopoietic_and_lymphoid_tissue(4)|kidney(20)|large_intestine(51)|lung(100)|ovary(5)|pancreas(2)|prostate(22)|skin(10)|stomach(3)|upper_aerodigestive_tract(3)|urinary_tract(4)	270						CATGGGCTCATGTCTTCTTCC	0.448000													15	20					0	0	1	0	0
ZNF862	643641	broad.mit.edu	37	7	149545325	149545325	+	Missense_Mutation	SNP	T	T	C			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr7:149545325T>C	ENST00000223210.4	+	4	988	c.743T>C	c.(742-744)cTg>cCg	p.L248P		NM_001099220.1	NP_001092690.1	O60290	ZN862_HUMAN	zinc finger protein 862	248					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	metal ion binding|nucleic acid binding|protein dimerization activity			breast(3)|central_nervous_system(1)|cervix(1)|endometrium(8)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(5)|lung(10)|ovary(1)|prostate(1)|skin(1)	34						CCAGGGCCTCTGGGAGGATTT	0.582000													12	10					0	0	1	0	0
WASH6P	653440	broad.mit.edu	37	X	155255043	155255043	+	RNA	SNP	G	G	A			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chrX:155255043G>A	ENST00000285718.7	+	0	1348				WASH6P_ENST00000461007.1_RNA																							ATCCTAGGGGGCTCCATGACA	0.642000													3	15					0	0	1	0	0
DPY19L2P1	554236	broad.mit.edu	37	7	35131480	35131480	+	RNA	SNP	A	A	T			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr7:35131480A>T	ENST00000436258.1	-	0	1889																											ATCTTCGTAAAGTGGATGATT	0.423000													3	54					0	0	1	0	0
DNM1P47	100216544	broad.mit.edu	37	15	102294648	102294648	+	RNA	SNP	T	T	C			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr15:102294648T>C	ENST00000561463.1	+	0	2694																											TTCTCAGAGCTGCTGTCCAAC	0.587000													3	39					0	0	1	0	0
DNM1P47	100216544	broad.mit.edu	37	15	102294651	102294651	+	RNA	SNP	T	T	G			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr15:102294651T>G	ENST00000561463.1	+	0	2697																											TCAGAGCTGCTGTCCAACCTG	0.587000													3	37					0	0	1	0	0
NBPF10	100132406	broad.mit.edu	37	1	145367767	145367767	+	Missense_Mutation	SNP	G	G	A	rs77484671		TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr1:145367767G>A	ENST00000342960.5	+	83	10398	c.10363G>A	c.(10363-10365)Gaa>Aaa	p.E3455K	NBPF10_ENST00000369339.2_Intron|NBPF10_ENST00000369338.1_Intron	NM_001039703.4	NP_001034792.4	A6NDV3	A6NDV3_HUMAN	neuroblastoma breakpoint family, member 10	3455								p.E3455K(5)		NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		atcaaagaaggaaagaagaag	0.423000													4	50					0	0	1	0	0
SLC13A4	26266	broad.mit.edu	37	7	135370341	135370341	+	Missense_Mutation	SNP	C	C	T			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr7:135370341C>T	ENST00000354042.4	-	14	2223	c.1534G>A	c.(1534-1536)Gtg>Atg	p.V512M	C7orf73_ENST00000422968.1_Intron|SLC13A4_ENST00000491630.1_5'UTR	NM_012450.2	NP_036582.2	Q9UKG4	S13A4_HUMAN	solute carrier family 13 (sodium/sulfate symporter), member 4	512						integral to plasma membrane	sodium:sulfate symporter activity			breast(1)|central_nervous_system(2)|endometrium(3)|kidney(2)|large_intestine(6)|lung(7)|skin(1)|upper_aerodigestive_tract(2)	24						ACAATGGACACGAGGATGCAT	0.567000													48	71					0	0	1	0	0
ECE1	1889	broad.mit.edu	37	1	21573845	21573845	+	Silent	SNP	G	G	A			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr1:21573845G>A	ENST00000415912.2	-	9	1109	c.984C>T	c.(982-984)ccC>ccT	p.P328P	ECE1_ENST00000528294.1_5'UTR|ECE1_ENST00000436918.2_Silent_p.P344P|ECE1_ENST00000374893.6_Silent_p.P344P|ECE1_ENST00000357071.4_Silent_p.P332P|ECE1_ENST00000264205.6_Silent_p.P341P	NM_001113348.1	NP_001106819.1	P42892	ECE1_HUMAN	endothelin converting enzyme 1	344					bradykinin catabolic process|calcitonin catabolic process|ear development|embryonic digit morphogenesis|endothelin maturation|heart development|positive regulation of receptor recycling|substance P catabolic process	early endosome|external side of plasma membrane|integral to membrane|intrinsic to endosome membrane|membrane fraction|perinuclear region of cytoplasm|plasma membrane|Weibel-Palade body	metal ion binding|metalloendopeptidase activity|protein homodimerization activity			endometrium(5)|kidney(1)|large_intestine(7)|lung(8)|ovary(2)|prostate(1)|skin(1)	25		Lung NSC(340;1.14e-05)|all_lung(284;1.23e-05)|Colorectal(325;3.46e-05)|Renal(390;9.67e-05)|Breast(348;0.00147)|Ovarian(437;0.00432)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0183)|OV - Ovarian serous cystadenocarcinoma(117;4.83e-27)|COAD - Colon adenocarcinoma(152;1.36e-06)|GBM - Glioblastoma multiforme(114;1.47e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000162)|STAD - Stomach adenocarcinoma(196;0.00326)|KIRC - Kidney renal clear cell carcinoma(1967;0.00755)|READ - Rectum adenocarcinoma(331;0.0678)|Lung(427;0.206)		AGTTGATGGCGGGTGCCAAGG	0.537000													3	30					0	0	1	0	0
NPIPB5	100132247	broad.mit.edu	37	16	22546262	22546262	+	Missense_Mutation	SNP	C	C	T			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr16:22546262C>T	ENST00000424340.1	+	7	2237	c.1958C>T	c.(1957-1959)cCg>cTg	p.P653L	NPIPB5_ENST00000415654.1_3'UTR|NPIPB5_ENST00000517539.1_Missense_Mutation_p.P653L	NM_001135865.1	NP_001129337.1			nuclear pore complex interacting protein family, member B5																		AGACACCTGCCGAGCGTCTGC	0.582000													4	117					0	0	1	0	0
WISP1	8840	broad.mit.edu	37	8	134232871	134232871	+	Missense_Mutation	SNP	G	G	A			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr8:134232871G>A	ENST00000250160.6	+	3	503	c.397G>A	c.(397-399)Ggc>Agc	p.G133S	WISP1_ENST00000517423.1_Intron|WISP1_ENST00000519433.1_Intron|WISP1_ENST00000220856.6_Intron|WISP1_ENST00000377863.2_Intron	NM_003882.3	NP_003873.1	O95388	WISP1_HUMAN	WNT1 inducible signaling pathway protein 1	133	VWFC.				cell adhesion|cell-cell signaling|regulation of cell growth|Wnt receptor signaling pathway	extracellular region|soluble fraction	insulin-like growth factor binding			central_nervous_system(1)|endometrium(2)|kidney(1)|large_intestine(5)|lung(8)|prostate(1)|skin(1)|upper_aerodigestive_tract(2)	21	all_epithelial(106;5.39e-23)|Lung NSC(106;7.26e-07)|all_lung(105;2.77e-06)|Ovarian(258;0.00438)|Acute lymphoblastic leukemia(118;0.155)		BRCA - Breast invasive adenocarcinoma(115;0.0107)			CTACAACAACGGCCAGTCCTT	0.667000													27	43					0	0	1	0	0
WASH3P	374666	broad.mit.edu	37	15	102516473	102516473	+	RNA	SNP	G	G	A			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr15:102516473G>A	ENST00000557932.1	+	0	1421																				central_nervous_system(1)|endometrium(6)|kidney(11)|prostate(5)|stomach(1)|urinary_tract(1)	25						ATCCTAGGGGGCTCCATGACA	0.642000													7	88					0	0	1	0	0
ZNF318	24149	broad.mit.edu	37	6	43323502	43323502	+	Frame_Shift_Del	DEL	T	T	-			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr6:43323502delT	ENST00000361428.2	-	4	1647	c.1570delA	c.(1570-1572)ggfs	p.R526fs	ZNF318_ENST00000318149.3_Frame_Shift_Del_p.R526fs	NM_014345.2	NP_055160.2	Q5VUA4	ZN318_HUMAN	zinc finger protein 318	526					meiosis|regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|nucleus	nucleic acid binding|zinc ion binding			autonomic_ganglia(1)|breast(8)|central_nervous_system(1)|cervix(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(11)|lung(21)|ovary(3)|prostate(1)|skin(1)|stomach(1)|urinary_tract(1)	61			Colorectal(64;0.00245)|COAD - Colon adenocarcinoma(64;0.00536)|all cancers(41;0.0171)|OV - Ovarian serous cystadenocarcinoma(102;0.0579)			CTACGTCGCCTTTTTTCCTGT	0.493													9	689	---	---	---	---					
SSPO	23145	broad.mit.edu	37	7	149518533	149518533	+	RNA	DEL	C	C	-	rs11353848		TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr7:149518533delC	ENST00000378016.2	+	0	12602							A2VEC9	SSPO_HUMAN	SCO-spondin						cell adhesion	extracellular space	peptidase inhibitor activity					Melanoma(164;0.165)|Ovarian(565;0.177)		OV - Ovarian serous cystadenocarcinoma(82;0.00625)			GAGGAGCAGTCCCAGAGCCAG	0.711													3	6	---	---	---	---					
C10orf71	118461	broad.mit.edu	37	10	50534970	50534977	+	Splice_Site	DEL	ACACACAC	ACACACAC	-	rs72337199		TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr10:50534970_50534977delACACACAC	ENST00000323868.4	+	4	2413_2415	c.2074_splice	c.e4-1	p.692_splice	C10orf71_ENST00000374144.3_3'UTR	NM_001135196.1	NP_001128668.1	Q711Q0	CJ071_HUMAN	chromosome 10 open reading frame 71	692								p.?(1)		endometrium(1)	1						AAAACAAGCAacacacacacacacacac	0.505													4	2	---	---	---	---					
CTC-260E6.6	0	broad.mit.edu	37	19	20243404	20243405	+	RNA	DEL	AC	AC	-			TCGA-QR-A70M-01A-11D-A35D-08	TCGA-QR-A70M-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	a0e1131e-5535-4486-b713-f1fffb65f6c4	abfa77cd-8240-4def-86b6-16fe97e5596f	g.chr19:20243404_20243405delAC	ENST00000590606.1	-	0	188				CTC-260E6.6_ENST00000593655.1_RNA|CTC-260E6.6_ENST00000586657.1_RNA																							TCCCTGGAAAACACACACACAC	0.411													10	113	---	---	---	---