Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
EEF2K	29904	broad.mit.edu	37	16	22268604	22268604	+	Missense_Mutation	SNP	G	G	A			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr16:22268604G>A	ENST00000263026.5	+	8	1273	c.799G>A	c.(799-801)Ggc>Agc	p.G267S		NM_013302.3	NP_037434.1	O00418	EF2K_HUMAN	eukaryotic elongation factor-2 kinase	267	Alpha-type protein kinase.				insulin receptor signaling pathway|translational elongation	cytosol	ATP binding|calcium ion binding|calmodulin binding|elongation factor-2 kinase activity|translation factor activity, nucleic acid binding			breast(1)|central_nervous_system(1)|endometrium(8)|large_intestine(2)|lung(13)|ovary(1)|prostate(1)|skin(2)	29				GBM - Glioblastoma multiforme(48;0.0223)		TGAGCGTTCCGGCCATCAGCT	0.572000													5	30					0	0	1	0	0
SLC16A5	9121	broad.mit.edu	37	17	73096383	73096383	+	Missense_Mutation	SNP	G	G	A	rs61735759		TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr17:73096383G>A	ENST00000450736.2	+	4	1040	c.625G>A	c.(625-627)Gag>Aag	p.E209K	SLC16A5_ENST00000538213.2_Missense_Mutation_p.E249K|SLC16A5_ENST00000580123.1_Missense_Mutation_p.E209K|SLC16A5_ENST00000329783.4_Missense_Mutation_p.E209K			O15375	MOT6_HUMAN	solute carrier family 16 (monocarboxylate transporter), member 5	209					organic anion transport	integral to plasma membrane|membrane fraction	secondary active monocarboxylate transmembrane transporter activity|symporter activity			central_nervous_system(1)|cervix(2)|endometrium(5)|kidney(1)|large_intestine(4)|lung(7)|skin(1)|upper_aerodigestive_tract(1)	22	all_lung(278;0.226)		LUSC - Lung squamous cell carcinoma(166;0.162)|Lung(188;0.235)		Pyruvic acid(DB00119)	GCCACCTCCCGAGACACCTGC	0.637000													3	22					0	0	1	0	0
GSTO1	9446	broad.mit.edu	37	10	106019439	106019439	+	Missense_Mutation	SNP	C	C	G			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr10:106019439C>G	ENST00000539281.1	+	3	521	c.165C>G	c.(163-165)atC>atG	p.I55M	GSTO1_ENST00000493946.1_3'UTR|GSTO1_ENST00000369710.4_Missense_Mutation_p.I83M|GSTO1_ENST00000369713.5_Missense_Mutation_p.I83M	NM_001191003.1	NP_001177932.1	P78417	GSTO1_HUMAN	glutathione S-transferase omega 1	83	GST N-terminal.				xenobiotic metabolic process	cytosol	glutathione transferase activity|monodehydroascorbate reductase (NADH) activity			large_intestine(1)|lung(1)|stomach(1)	3		Colorectal(252;0.102)|Breast(234;0.122)		Epithelial(162;8.07e-10)|all cancers(201;2.72e-08)|BRCA - Breast invasive adenocarcinoma(275;0.0147)	Glutathione(DB00143)	GTCAGCTGATCTACGAGTCTG	0.463000													14	44					0	0	1	0	0
GJA8	2703	broad.mit.edu	37	1	147380281	147380281	+	Missense_Mutation	SNP	G	G	A			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr1:147380281G>A	ENST00000240986.4	+	2	252	c.199G>A	c.(199-201)Gac>Aac	p.D67N	GJA8_ENST00000369235.1_Missense_Mutation_p.D67N	NM_005267.4	NP_005258.2	P48165	CXA8_HUMAN	gap junction protein, alpha 8, 50kDa	67					cell communication|visual perception	connexon complex|integral to plasma membrane	channel activity	p.D67N(1)		NS(1)|breast(2)|central_nervous_system(1)|endometrium(3)|kidney(1)|large_intestine(9)|lung(12)|ovary(2)|pancreas(1)|prostate(3)|skin(1)|stomach(1)	37	all_hematologic(923;0.0276)					CGTCTGCTACGACGAGGCCTT	0.612000													13	42					0	0	1	0	0
LPA	4018	broad.mit.edu	37	6	160998309	160998309	+	Missense_Mutation	SNP	G	G	A			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr6:160998309G>A	ENST00000447678.1	-	29	4610	c.4490C>T	c.(4489-4491)cCt>cTt	p.P1497L	LPA_ENST00000316300.5_Missense_Mutation_p.P1497L	NM_005577.2	NP_005568.2	P08519	APOA_HUMAN	lipoprotein, Lp(a)	4005	Kringle 13.				blood circulation|lipid metabolic process|lipid transport|lipoprotein metabolic process|proteolysis|receptor-mediated endocytosis	plasma lipoprotein particle	apolipoprotein binding|endopeptidase inhibitor activity|fibronectin binding|heparin binding|serine-type endopeptidase activity			NS(1)|breast(3)|central_nervous_system(3)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(16)|lung(54)|ovary(4)|pancreas(1)|prostate(2)|skin(10)|stomach(1)|urinary_tract(1)	107		Breast(66;0.000496)|Ovarian(120;0.0303)|Prostate(117;0.0965)		OV - Ovarian serous cystadenocarcinoma(65;2.5e-17)|BRCA - Breast invasive adenocarcinoma(81;6.48e-06)	Aminocaproic Acid(DB00513)	CTGGACCACAGGGCTTTTCTC	0.428000													17	91					0	0	1	0	0
OPCML	4978	broad.mit.edu	37	11	132306614	132306614	+	Missense_Mutation	SNP	G	G	T			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr11:132306614G>T	ENST00000331898.7	-	5	1302	c.724C>A	c.(724-726)Ctg>Atg	p.L242M	OPCML_ENST00000529038.1_5'UTR|OPCML_ENST00000524381.1_Missense_Mutation_p.L235M|OPCML_ENST00000374778.4_Missense_Mutation_p.L201M|OPCML_ENST00000541867.1_Missense_Mutation_p.L242M	NM_002545.3	NP_002536.1	Q14982	OPCM_HUMAN	opioid binding protein/cell adhesion molecule-like	242	Ig-like C2-type 3.				cell adhesion|neuron recognition	anchored to membrane|integral to plasma membrane	opioid receptor activity			endometrium(5)|kidney(1)|large_intestine(12)|lung(17)|ovary(2)|skin(2)|urinary_tract(8)	47	all_hematologic(175;0.019)	all_cancers(12;5.86e-24)|all_epithelial(12;2.65e-17)|all_lung(97;2.89e-05)|Lung NSC(97;6.16e-05)|Breast(109;0.000126)|Medulloblastoma(222;0.0269)|all_neural(223;0.0326)|Esophageal squamous(93;0.129)		all cancers(11;4.61e-06)|OV - Ovarian serous cystadenocarcinoma(99;0.012)		TCACAGCTCAGGATGCCCTTC	0.502000													3	33					6.4e-05	7.31429e-05	1	1	0
KCNN3	3782	broad.mit.edu	37	1	154841694	154841694	+	Silent	SNP	G	G	A			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr1:154841694G>A	ENST00000271915.3	-	1	1062	c.747C>T	c.(745-747)acC>acT	p.T249T		NM_002249.5	NP_002240.3	Q9UGI6	KCNN3_HUMAN	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	254						integral to membrane	calmodulin binding			cervix(1)|endometrium(3)|kidney(2)|large_intestine(6)|lung(11)|prostate(4)|skin(1)	28	all_lung(78;2.29e-27)|all_hematologic(923;0.088)|Hepatocellular(266;0.108)|all_neural(408;0.245)		BRCA - Breast invasive adenocarcinoma(34;0.00819)			TGCTGCTGGCGGTGGTGCCGG	0.582000													5	54					0	0	1	0	0
TEKT5	146279	broad.mit.edu	37	16	10729651	10729651	+	Missense_Mutation	SNP	A	A	C			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr16:10729651A>C	ENST00000283025.2	-	6	1282	c.1211T>G	c.(1210-1212)aTg>aGg	p.M404R	TEKT5_ENST00000574923.1_5'UTR	NM_144674.1	NP_653275.1	Q96M29	TEKT5_HUMAN	tektin 5	404					microtubule cytoskeleton organization	cilium axoneme|flagellar axoneme|microtubule				breast(2)|cervix(1)|endometrium(2)|kidney(2)|large_intestine(9)|lung(9)|ovary(2)|prostate(2)|skin(1)|upper_aerodigestive_tract(4)	34						GCACAGCTCCATGTTGGGGCG	0.622000													14	95					0	0	1	0	0
MYH7	4625	broad.mit.edu	37	14	23887583	23887583	+	Silent	SNP	C	C	T	rs144465613	byFrequency	TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr14:23887583C>T	ENST00000355349.3	-	30	4167	c.4005G>A	c.(4003-4005)tcG>tcA	p.S1335S		NM_000257.2	NP_000248.2	P12883	MYH7_HUMAN	myosin, heavy chain 7, cardiac muscle, beta	1335					adult heart development|muscle filament sliding|regulation of heart rate|ventricular cardiac muscle tissue morphogenesis	focal adhesion|muscle myosin complex|myosin filament|nucleus|sarcomere	actin binding|actin-dependent ATPase activity|ATP binding|calmodulin binding|microfilament motor activity|structural constituent of muscle	p.S1335S(3)		NS(3)|breast(4)|central_nervous_system(2)|cervix(2)|endometrium(14)|haematopoietic_and_lymphoid_tissue(3)|kidney(5)|large_intestine(19)|lung(57)|ovary(5)|prostate(9)|skin(5)|stomach(1)|upper_aerodigestive_tract(3)|urinary_tract(5)	137	all_cancers(95;2.54e-05)			GBM - Glioblastoma multiforme(265;0.00725)		CATGCCGGGCCGACTGCAGTG	0.662000													4	27					0	0	1	0	0
ABCA13	154664	broad.mit.edu	37	7	48390281	48390281	+	Missense_Mutation	SNP	C	C	T			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr7:48390281C>T	ENST00000435803.1	+	30	10270	c.10246C>T	c.(10246-10248)Cgc>Tgc	p.R3416C		NM_152701.3	NP_689914.2	Q86UQ4	ABCAD_HUMAN	ATP-binding cassette, sub-family A (ABC1), member 13	3416					transport	integral to membrane	ATP binding|ATPase activity			breast(13)|central_nervous_system(8)|endometrium(25)|haematopoietic_and_lymphoid_tissue(4)|kidney(20)|large_intestine(51)|lung(100)|ovary(5)|pancreas(2)|prostate(22)|skin(10)|stomach(3)|upper_aerodigestive_tract(3)|urinary_tract(4)	270						AGGCGCTGGACGCTTCCGTTT	0.527000													3	54					0	0	1	0	0
NCAN	1463	broad.mit.edu	37	19	19338368	19338368	+	Missense_Mutation	SNP	C	C	A			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr19:19338368C>A	ENST00000252575.5	+	8	1982	c.1939C>A	c.(1939-1941)Ccc>Acc	p.P647T	NCAN_ENST00000538881.1_Missense_Mutation_p.P98T	NM_004386.2	NP_004377.2	O14594	NCAN_HUMAN	neurocan	647					axon guidance|cell adhesion	extracellular region	calcium ion binding|hyaluronic acid binding|sugar binding			breast(1)|cervix(2)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(8)|lung(32)|ovary(5)|pancreas(1)|prostate(3)|skin(3)|upper_aerodigestive_tract(1)	64			Epithelial(12;0.00544)			GCTACCACACCCCACCCCCAT	0.632000													3	43					0.115264	0.115264	1	1	0
ATP5G3	518	broad.mit.edu	37	2	176043113	176043113	+	Missense_Mutation	SNP	T	T	C			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr2:176043113T>C	ENST00000284727.4	-	5	3356	c.332A>G	c.(331-333)cAg>cGg	p.Q111R	ATP5G3_ENST00000392541.3_Missense_Mutation_p.Q111R|ATP5G3_ENST00000409194.1_Missense_Mutation_p.Q111R	NM_001002258.4|NM_001689.4	NP_001002258.1|NP_001680.1	P48201	AT5G3_HUMAN	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)	111					ATP hydrolysis coupled proton transport|ATP synthesis coupled proton transport	integral to membrane|mitochondrial proton-transporting ATP synthase complex|proton-transporting ATP synthase complex, coupling factor F(o)	hydrogen ion transmembrane transporter activity|lipid binding|protein binding			large_intestine(1)|lung(2)|ovary(1)|upper_aerodigestive_tract(1)	5			OV - Ovarian serous cystadenocarcinoma(117;0.147)			GAACAGCTGCTGCTTCAGCGA	0.363000													7	56					0	0	1	0	0
MORN4	118812	broad.mit.edu	37	10	99377062	99377062	+	Missense_Mutation	SNP	C	C	T			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr10:99377062C>T	ENST00000335628.3	-	2	258	c.259G>A	c.(259-261)Ggt>Agt	p.G87S	PI4K2A_ENST00000370649.3_Intron|MORN4_ENST00000307450.6_Missense_Mutation_p.G29S|MORN4_ENST00000478953.1_Missense_Mutation_p.G29S|PI4K2A_ENST00000555577.1_Intron			Q8NDC4	MORN4_HUMAN	MORN repeat containing 4	29										large_intestine(1)|lung(1)|stomach(2)	4						ATCAGTTGACCAAAACCATGC	0.498000													12	75					0	0	1	0	0
ATP12A	479	broad.mit.edu	37	13	25266991	25266991	+	Missense_Mutation	SNP	G	G	A			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr13:25266991G>A	ENST00000218548.6	+	10	1685	c.1352G>A	c.(1351-1353)cGa>cAa	p.R451Q	ATP12A_ENST00000381946.3_Missense_Mutation_p.R445Q	NM_001185085.1|NM_001676.5	NP_001172014.1|NP_001667.4	P54707	AT12A_HUMAN	ATPase, H+/K+ transporting, nongastric, alpha polypeptide	445					ATP biosynthetic process	hydrogen:potassium-exchanging ATPase complex	ATP binding|hydrogen:potassium-exchanging ATPase activity|metal ion binding	p.R445L(1)		breast(6)|central_nervous_system(4)|endometrium(3)|kidney(5)|large_intestine(23)|lung(23)|ovary(2)|pancreas(1)|prostate(2)|skin(5)	74		Lung SC(185;0.0225)|Breast(139;0.077)		all cancers(112;0.0307)|Epithelial(112;0.086)|OV - Ovarian serous cystadenocarcinoma(117;0.228)	Esomeprazole(DB00736)|Pantoprazole(DB00213)	TTGTGTAACCGAGCAGAGTTC	0.463000													22	131					0	0	1	0	0
BCCIP	56647	broad.mit.edu	37	10	127512145	127512145	+	Missense_Mutation	SNP	C	C	G	rs138579130		TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr10:127512145C>G	ENST00000299130.3	+	1	31	c.19C>G	c.(19-21)Cgg>Ggg	p.R7G	BCCIP_ENST00000429863.2_Missense_Mutation_p.R7G|BCCIP_ENST00000368759.5_Missense_Mutation_p.R7G|BCCIP_ENST00000278100.6_Missense_Mutation_p.R7G	NM_078469.2	NP_510869.1	Q9P287	BCCIP_HUMAN	BRCA2 and CDKN1A interacting protein	7					cell cycle|DNA repair|neuroendocrine cell differentiation|regulation of cyclin-dependent protein kinase activity	nuclear cyclin-dependent protein kinase holoenzyme complex	kinase regulator activity|protein binding			breast(1)|kidney(2)|large_intestine(3)|lung(1)|ovary(1)	8		all_lung(145;0.00751)|Lung NSC(174;0.0115)|Colorectal(57;0.0846)|all_neural(114;0.0936)				CAGGTCTAAGCGGCGTGCCGT	0.612000													14	60					0	0	1	0	0
PEAK1	79834	broad.mit.edu	37	15	77406832	77406832	+	Missense_Mutation	SNP	C	C	T			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr15:77406832C>T	ENST00000560626.2	-	7	5382	c.4907G>A	c.(4906-4908)cGg>cAg	p.R1636Q	PEAK1_ENST00000312493.4_Missense_Mutation_p.R1636Q			Q9H792	PEAK1_HUMAN	pseudopodium-enriched atypical kinase 1	1636	Protein kinase.				cell migration|protein autophosphorylation|substrate adhesion-dependent cell spreading	actin cytoskeleton|cytoplasm|focal adhesion	ATP binding|non-membrane spanning protein tyrosine kinase activity|protein binding										CTGCAGACCCCGGGAGTAGGG	0.602000													6	24					0	0	1	0	0
SOAT1	6646	broad.mit.edu	37	1	179310184	179310184	+	Translation_Start_Site	SNP	C	C	A			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr1:179310184C>A	ENST00000535686.1	+	0	482				SOAT1_ENST00000540564.1_Silent_p.L115L|SOAT1_ENST00000367619.3_Silent_p.L173L|SOAT1_ENST00000539888.1_Silent_p.L108L			P35610	SOAT1_HUMAN	sterol O-acyltransferase 1						cholesterol efflux|cholesterol esterification|cholesterol homeostasis|cholesterol metabolic process|cholesterol storage|macrophage derived foam cell differentiation|positive regulation of amyloid precursor protein biosynthetic process|very-low-density lipoprotein particle assembly	endoplasmic reticulum membrane|integral to membrane|microsome	cholesterol binding|cholesterol O-acyltransferase activity|fatty-acyl-CoA binding			central_nervous_system(1)|endometrium(3)|large_intestine(1)|lung(10)|prostate(1)|skin(3)|stomach(1)	20					Ezetimibe(DB00973)|Hesperetin(DB01094)	AGTTCAGCCTCCTGTCTTATG	0.393000													9	40					0.00448238	0.00488987	1	1	0
MYH2	4620	broad.mit.edu	37	17	10428898	10428898	+	Silent	SNP	C	C	T	rs144654838		TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr17:10428898C>T	ENST00000245503.5	-	32	4791	c.4407G>A	c.(4405-4407)acG>acA	p.T1469T	CTC-297N7.7_ENST00000587182.1_RNA|CTC-297N7.7_ENST00000581304.1_RNA|MYH2_ENST00000532183.1_Intron|MYH2_ENST00000397183.2_Silent_p.T1469T|CTC-297N7.7_ENST00000399342.2_RNA	NM_017534.5	NP_060004.3	Q9UKX2	MYH2_HUMAN	myosin, heavy chain 2, skeletal muscle, adult	1469					muscle filament sliding	muscle myosin complex|myosin filament|sarcomere	actin binding|ATP binding|calmodulin binding|microfilament motor activity|structural constituent of muscle			NS(1)|biliary_tract(1)|breast(9)|central_nervous_system(1)|endometrium(13)|haematopoietic_and_lymphoid_tissue(1)|kidney(8)|large_intestine(16)|lung(99)|ovary(6)|pancreas(4)|prostate(3)|skin(8)|upper_aerodigestive_tract(2)|urinary_tract(4)	176						GCTCAGCATGCGTTTCCTCAC	0.463000													9	42					0	0	1	0	0
CAND2	23066	broad.mit.edu	37	3	12845101	12845101	+	Silent	SNP	C	C	T			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr3:12845101C>T	ENST00000456430.2	+	2	224	c.183C>T	c.(181-183)aaC>aaT	p.N61N	CAND2_ENST00000295989.5_Silent_p.N61N	NM_001162499.1	NP_001155971.1	O75155	CAND2_HUMAN	cullin-associated and neddylation-dissociated 2 (putative)	61					positive regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	protein binding			breast(3)|central_nervous_system(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(10)|lung(8)|pancreas(1)|prostate(1)|skin(5)|upper_aerodigestive_tract(1)|urinary_tract(1)	37						AGGACAAGAACGGTGAGGTGC	0.622000													4	36					0	0	1	0	0
HNRNPKP3	0	broad.mit.edu	37	11	43283606	43283606	+	RNA	DEL	A	A	-			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr11:43283606delA	ENST00000511537.1	-	0	1329					NR_033868.1																						AAGCAAATGTAAAAAAAAAAA	0.388													2	4	---	---	---	---					
KSR2	283455	broad.mit.edu	37	12	118112112	118112112	+	Frame_Shift_Del	DEL	G	G	-			TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr12:118112112delG	ENST00000302438.5	-	2	52	c.53delC	c.(52-54)cafs	p.P18fs	KSR2_ENST00000339824.5_Intron|KSR2_ENST00000425217.1_Intron|KSR2_ENST00000545002.1_5'UTR			Q6VAB6	KSR2_HUMAN	kinase suppressor of ras 2	0					intracellular signal transduction	cytoplasm|membrane	ATP binding|metal ion binding|protein serine/threonine kinase activity			NS(1)|breast(3)|central_nervous_system(2)|cervix(1)|endometrium(10)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(12)|lung(25)|prostate(2)|skin(4)|stomach(1)|upper_aerodigestive_tract(2)|urinary_tract(1)	67	all_neural(191;0.0804)|Medulloblastoma(191;0.0922)					cctcctcgctggaatcgcaga	0.418													2	4	---	---	---	---					
KTN1-AS1	0	broad.mit.edu	37	14	56014172	56014174	+	RNA	DEL	AAG	AAG	-	rs72015246		TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr14:56014172_56014174delAAG	ENST00000554558.1	-	0	364																											aaaaaaaaaaaagaaTTGGCACA	0.443													2	4	---	---	---	---					
RP11-252A24.2	0	broad.mit.edu	37	16	74372915	74372915	+	RNA	DEL	T	T	-	rs67181940		TCGA-EJ-A8FO-01A-21D-A364-08	TCGA-EJ-A8FO-10A-01D-A362-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	97bc618f-218f-4eb3-a7f9-ad32524a0be0	109b048e-6856-44d8-a162-3d4c46493327	g.chr16:74372915delT	ENST00000429810.2	-	0	1404																											ACGTAGtttgttttttttttt	0.438													4	5	---	---	---	---