Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target APBB1IP 54518 hgsc.bcm.edu 36 10 26829864 26829864 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_019043 exon5 c.C271A p.Q91K . . . FAS 355 hgsc.bcm.edu 36 10 90760520 90760520 + Missense_Mutation SNP T T A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 T T T A T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_000043 exon6 c.T536A p.L179H . . . SMPD1 6609 hgsc.bcm.edu 36 11 6369957 6369957 + Silent SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001007593 exon2 c.C1083T p.T361T . . . NUDT22 84304 hgsc.bcm.edu 36 11 63751654 63751654 + Silent SNP C C G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001128612 exon3 c.C519G p.L173L . . . RNF41 10193 hgsc.bcm.edu 36 12 54890398 54890398 + Silent SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_005785 exon4 c.C312T p.S104S . . . FNDC3A 22862 hgsc.bcm.edu 36 13 48640764 48640764 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A T A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001079673 exon10 c.A1052T p.Y351F . . . KLF5 688 hgsc.bcm.edu 36 13 72534463 72534463 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C G C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001730 exon2 c.C725G p.S242C . . . CLDN10 9071 hgsc.bcm.edu 36 13 94884261 94884261 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_182848 exon1 c.C173A p.S58Y . . . CTSG 1511 hgsc.bcm.edu 36 14 24114447 24114447 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001911 exon2 c.G67A p.G23R . . . G2E3 55632 hgsc.bcm.edu 36 14 30151251 30151251 + Missense_Mutation SNP A A C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A C A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_017769 exon13 c.A1588C p.I530L . . . SEZ6L2 26470 hgsc.bcm.edu 36 16 29798707 29798707 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001114100 exon7 c.G1210A p.D404N . . . GRIN2A 2903 hgsc.bcm.edu 36 16 9765837 9765837 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001134408 exon13 c.G3065A p.R1022H . . . TP53 7157 hgsc.bcm.edu 36 17 7519131 7519131 + Missense_Mutation SNP C C T rs28934578 unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001126114 exon5 c.G524A p.R175H TP53,lung,NS,Substitution - Missense,0 . . MYH1 4619 hgsc.bcm.edu 36 17 10349871 10349871 + Silent SNP A A G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A G A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_005963 exon19 c.T2157C p.Y719Y . . . ZNF532 55205 hgsc.bcm.edu 36 18 54736919 54736919 + Silent SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_018181 exon4 c.C420T p.D140D . . . HNRNPL 3191 hgsc.bcm.edu 36 19 44021039 44021039 + Silent SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001005335 exon10 c.C996T p.Y332Y . . . TSPAN2 10100 hgsc.bcm.edu 36 1 115397547 115397547 + Silent SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_005725 exon7 c.C576T p.V192V . . . KLHL20 27252 hgsc.bcm.edu 36 1 172010188 172010188 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C G C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_014458 exon9 c.C1417G p.P473A . . . PRG4 10216 hgsc.bcm.edu 36 1 184542178 184542178 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001127709 exon5 c.C425T p.T142I . . . UBR4 23352 hgsc.bcm.edu 36 1 19383199 19383199 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_020765 exon16 c.C1996T p.R666W . . . C4BPA 722 hgsc.bcm.edu 36 1 205371655 205371655 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_000715 exon8 c.C1031T p.T344M . . . RCOR3 55758 hgsc.bcm.edu 36 1 209519235 209519235 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A G A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001136223 exon7 c.A674G p.D225G . . . TP53BP2 7159 hgsc.bcm.edu 36 1 222043407 222043407 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001031685 exon16 c.G3089T p.S1030I . . . KIAA1804 84451 hgsc.bcm.edu 36 1 231556279 231556279 + Missense_Mutation SNP C C G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C G C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_032435 exon3 c.C1090G p.P364A . . . SLC2A1 6513 hgsc.bcm.edu 36 1 43169081 43169081 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_006516 exon4 c.G319A p.A107T . . . BEND5 79656 hgsc.bcm.edu 36 1 48974524 48974524 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_024603 exon5 c.C1082T p.S361L . . . CASS4 57091 hgsc.bcm.edu 36 20 54445847 54445847 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_020356 exon2 c.G257T p.G86V . . . TUBA8 51807 hgsc.bcm.edu 36 22 16989377 16989377 + Missense_Mutation SNP A A C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A C A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001193414 exon4 c.A434C p.D145A . . . PNPLA5 150379 hgsc.bcm.edu 36 22 42617057 42617057 + Nonsense_Mutation SNP G G T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_138814 exon3 c.C447A p.Y149X . . . TTL 150465 hgsc.bcm.edu 36 2 113002742 113002742 + Nonsense_Mutation SNP G G T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_153712 exon7 c.G1033T p.E345X . . . SLC20A1 6574 hgsc.bcm.edu 36 2 113133040 113133040 + Missense_Mutation SNP A A G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A G A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_005415 exon7 c.A946G p.T316A . . . GPR39 2863 hgsc.bcm.edu 36 2 132891196 132891196 + Silent SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001508 exon1 c.C111T p.Y37Y . . . NDUFS1 4719 hgsc.bcm.edu 36 2 206717911 206717911 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_005006 exon9 c.G822T p.L274F . . . SPAG16 79582 hgsc.bcm.edu 36 2 214983230 214983230 + Silent SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_024532 exon16 c.C1842T p.D614D . . . SLC8A1 6546 hgsc.bcm.edu 36 2 40220278 40220278 + Missense_Mutation SNP G G C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G C G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001112800 exon8 c.C2297G p.P766R . . . EGR4 1961 hgsc.bcm.edu 36 2 73372378 73372378 + Silent SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001965 exon2 c.G1485A p.A495A . . . CNGA3 1261 hgsc.bcm.edu 36 2 98363076 98363076 + Silent SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001298 exon4 c.G222A p.S74S . . . GAL3ST2 64090 hgsc.bcm.edu 36 2 242389946 242389946 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_022134 exon3 c.C197T p.T66M . . . TSEN2 80746 hgsc.bcm.edu 36 3 12506461 12506461 + Silent SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_025265 exon2 c.G162A p.A54A . . . RUVBL1 8607 hgsc.bcm.edu 36 3 129302135 129302135 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_003707 exon6 c.G746A p.R249Q . . . ATP2C1 27032 hgsc.bcm.edu 36 3 132198315 132198315 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001199183 exon23 c.G2180A p.G727E . . . TMEM108 66000 hgsc.bcm.edu 36 3 134581591 134581591 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001136469 exon4 c.G346T p.G116W . . . P2RY14 9934 hgsc.bcm.edu 36 3 152414130 152414130 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_014879 exon3 c.G665A p.R222Q . . . ZMAT3 64393 hgsc.bcm.edu 36 3 180225535 180225535 + Silent SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_152240 exon7 c.G831A p.R277R . . . ZMAT3 64393 hgsc.bcm.edu 36 3 180228159 180228159 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_152240 exon5 c.C526T p.R176W . . . C3orf67 200844 hgsc.bcm.edu 36 3 58828643 58828643 + Missense_Mutation SNP T T C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 T T T C T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_198463 exon10 c.A700G p.N234D . . . ADAMTS9 56999 hgsc.bcm.edu 36 3 64564794 64564794 + Silent SNP A A T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_182920 exon25 c.T3591A p.T1197T . . . CPOX 1371 hgsc.bcm.edu 36 3 99790370 99790370 + Missense_Mutation SNP A A T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A T A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_000097 exon4 c.T830A p.F277Y . . . DCHS2 54798 hgsc.bcm.edu 36 4 155375938 155375938 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_017639 exon25 c.G7951A p.E2651K . . . APC 324 hgsc.bcm.edu 36 5 112156042 112156042 + Nonsense_Mutation SNP C C T rs62619935 unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001127510 exon8 c.C646T p.R216X . . . APC 324 hgsc.bcm.edu 36 5 112156090 112156090 + Nonsense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001127510 exon8 c.C694T p.R232X APC,large_intestine,NS,Substitution - Nonsense,0 . . TCF7 6932 hgsc.bcm.edu 36 5 133506629 133506629 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_003202 exon8 c.C965T p.A322V . . . DNAH5 1767 hgsc.bcm.edu 36 5 13975251 13975251 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001369 exon5 c.G625A p.V209I . . . POU4F3 5459 hgsc.bcm.edu 36 5 145699798 145699798 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_002700 exon2 c.G615T p.Q205H . . . NMUR2 56923 hgsc.bcm.edu 36 5 151764408 151764408 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_020167 exon1 c.G460A p.A154T . . . ERGIC1 57222 hgsc.bcm.edu 36 5 172274375 172274375 + Silent SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001031711 exon5 c.C303T p.I101I . . . ADAMTS2 9509 hgsc.bcm.edu 36 5 178511854 178511854 + Silent SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_021599 exon10 c.C1524T p.T508T . . . RASGEF1C 255426 hgsc.bcm.edu 36 5 179478261 179478261 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_175062 exon10 c.G1037A p.R346H . . . PDZD2 23037 hgsc.bcm.edu 36 5 32109808 32109808 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_178140 exon17 c.G2839A p.G947R . . . IRX1 79192 hgsc.bcm.edu 36 5 3653194 3653194 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_024337 exon2 c.G1132A p.A378T . . . PSMB8 5696 hgsc.bcm.edu 36 6 32919679 32919679 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_148919 exon1 c.G73T p.G25W . . . GLP1R 2740 hgsc.bcm.edu 36 6 39142005 39142005 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_002062 exon5 c.G457A p.A153T . . . OGFRL1 79627 hgsc.bcm.edu 36 6 72063205 72063205 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_024576 exon6 c.C656T p.A219V . . . HTR1B 3351 hgsc.bcm.edu 36 6 78229737 78229737 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_000863 exon1 c.G103A p.A35T . . . BACH2 60468 hgsc.bcm.edu 36 6 90717543 90717543 + Missense_Mutation SNP C C T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_021813 exon7 c.G1003A p.V335M . . . SPAG1 6674 hgsc.bcm.edu 36 8 101321877 101321877 + Missense_Mutation SNP A A C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A C A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_003114 exon18 c.A2351C p.K784T . . . SFRP1 6422 hgsc.bcm.edu 36 8 41241849 41241849 + Missense_Mutation SNP A A C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A C A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_003012 exon3 c.T939G p.F313L . . . ZNF703 80139 hgsc.bcm.edu 36 8 37675300 37675300 + Missense_Mutation SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_025069 exon2 c.G1723A p.A575T . . . TGFBR1 7046 hgsc.bcm.edu 36 9 100931133 100931133 + Missense_Mutation SNP A A C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A C A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_004612 exon2 c.A273C p.K91N . . . ZNF462 58499 hgsc.bcm.edu 36 9 108729794 108729794 + Silent SNP G G A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_021224 exon3 c.G3780A p.T1260T . . . STXBP1 6812 hgsc.bcm.edu 36 9 129486468 129486468 + Missense_Mutation SNP G G T novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_003165 exon19 c.G1703T p.G568V . . . TRPM3 80036 hgsc.bcm.edu 36 9 72588909 72588909 + Silent SNP A A G novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 A A A G A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_001007471 exon7 c.T1080C p.V360V . . . PPEF1 5475 hgsc.bcm.edu 36 X 18677856 18677856 + Missense_Mutation SNP C C A novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_152226 exon7 c.C261A p.S87R . . . CXorf22 170063 hgsc.bcm.edu 36 X 35894665 35894665 + Missense_Mutation SNP G G C novel unknown TCGA-AG-3598-01A-01W-0833-10 TCGA-AG-3598-10A-01W-0833-10 G G G C G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7f987d01-01ba-4ec9-a775-bef2f1aaddfd 726a5de6-6979-4171-88dd-83f4bdf7fc3c NM_152632 exon9 c.G1473C p.E491D . . .