Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error default_gene_name gene_name_source ensembl_gene_id tier dbSNP GMAF n_ref_count n_alt_count normal_vaf t_ref_count t_alt_count tumor_vaf n_ref_count_val n_alt_count_val normal_vaf_val t_ref_count_val t_alt_count_val tumor_vaf_val ZNF503 0 genome.wustl.edu 37 10 77158854 77158854 + Missense_Mutation SNP A A T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 A A A T A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 10 77158854 77158854 A T SNP ZNF503 ENST00000372524 human ensembl 74_37 -1 known missense c.1594 p.S532T 1.000 pfscan_Znf_C2H2 pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2 - no_errors ZNF503 HGNC ENSG00000165655 tier1 - - 12 0 0.00 12 9 42.86 24 0 0.00 31 8 20.51 TXK 0 genome.wustl.edu 37 4 48097218 48097218 + Missense_Mutation SNP C C A TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 C C C A C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 4 48097218 48097218 C A SNP TXK ENST00000264316 human ensembl 74_37 -1 known missense c.523 p.V175F 1.000 pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2 pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2 - no_errors TXK HGNC ENSG00000074966 tier1 - - 62 0 0.00 61 22 26.51 88 0 0.00 68 42 38.18 DPH2 0 genome.wustl.edu 37 1 44436462 44436462 + Missense_Mutation SNP A A G TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 1 44436462 44436462 A G SNP DPH2 ENST00000476260 human ensembl 74_37 +1 known missense c.290 p.N97S 0.000 NULL NULL - no_errors DPH2 HGNC ENSG00000132768 tier1 - - 15 0 0.00 7 4 36.36 88 0 0.00 53 35 39.77 TGS1 0 genome.wustl.edu 37 8 56737232 56737232 + Silent SNP C C T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 8 56737232 56737232 C T SNP TGS1 ENST00000260129 human ensembl 74_37 +1 known silent c.2532 p.D844 1.000 pfam_R_cap_Gua-N2-MeTrfase pfam_R_cap_Gua-N2-MeTrfase,pfam_R_methylase_dom,pfam_tR_Trfase_Trm5/Tyw2 - no_errors TGS1 HGNC ENSG00000137574 tier1 - - 106 0 0.00 48 39 44.83 129 0 0.00 48 37 43.53 KRT5 0 genome.wustl.edu 37 12 52910467 52910467 + Missense_Mutation SNP C C T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 12 52910467 52910467 C T SNP KRT5 ENST00000252242 human ensembl 74_37 -1 known missense c.1393 p.V465M 1.000 pfam_IF pfam_IF,superfamily_Prefoldin,prints_Keratin_II - no_errors KRT5 HGNC ENSG00000186081 tier1 - - 39 0 0.00 33 6 15.38 4 0 0.00 10 3 23.08 SPTB 0 genome.wustl.edu 37 14 65268039 65268039 + Missense_Mutation SNP G G A TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 14 65268039 65268039 G A SNP SPTB ENST00000389722 human ensembl 74_37 -1 known missense c.727 p.R243C 1.000 pirsf_Spectrin_bsu,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology - no_errors SPTB HGNC ENSG00000070182 tier1 - - 33 0 0.00 19 8 29.63 29 0 0.00 10 9 47.37 CACHD1 0 genome.wustl.edu 37 1 65157848 65157848 + R SNP A A G TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 1 65157848 65157848 A G SNP CACHD1 ENST00000470527 human ensembl 74_37 +1 known rna NULL NULL 0.001 - - - no_errors CACHD1 HGNC ENSG00000158966 tier1 - - 48 0 0.00 28 17 37.78 124 0 0.00 78 32 29.09 MYBL1 0 genome.wustl.edu 37 8 67511292 67511292 + Missense_Mutation SNP T T C TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 T T T C T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 8 67511292 67511292 T C SNP MYBL1 ENST00000522677 human ensembl 74_37 -1 known missense c.284 p.D95G 1.000 pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom - no_errors MYBL1 HGNC ENSG00000185697 tier1 - - 70 0 0.00 41 21 33.87 87 0 0.00 39 23 37.10 TAF1L 0 genome.wustl.edu 37 9 32635503 32635503 + Silent SNP G G A TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 9 32635503 32635503 G A SNP TAF1L ENST00000242310 human ensembl 74_37 -1 known silent c.75 p.S25 1.000 pirsf_TAF1_animal,pfam_TAF_II_230-bd pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain - no_errors TAF1L HGNC ENSG00000122728 tier1 - - 73 0 0.00 73 18 19.78 62 0 0.00 67 29 30.21 ME3 0 genome.wustl.edu 37 11 86160930 86160930 + Splice_Site SNP C C T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 11 86160930 86160930 C T SNP ME3 ENST00000359636 human ensembl 74_37 -1 known splice_site c.1131+1 e9+1 1.000 - - - no_errors ME3 HGNC ENSG00000151376 tier1 - - 34 0 0.00 17 13 43.33 128 0 0.00 34 29 46.03 WWC1 0 genome.wustl.edu 37 5 167855148 167855148 + Splice_Site SNP T T C TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 T T T C T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 5 167855148 167855148 T C SNP WWC1 ENST00000265293 human ensembl 74_37 +1 known splice_site c.1919+2 e12+2 1.000 - - - no_errors WWC1 HGNC ENSG00000113645 tier1 - - 40 0 0.00 13 10 43.48 89 0 0.00 40 17 29.82 RAD50 0 genome.wustl.edu 37 5 131927091 131927091 + Missense_Mutation SNP A A G TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 A A A G A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 5 131927091 131927091 A G SNP RAD50 ENST00000265335 human ensembl 74_37 +1 known missense c.1628 p.K543R 1.000 superfamily_P-loop_NTPase,tigrfam_Rad50_eukaryotes pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes - no_errors RAD50 HGNC ENSG00000113522 tier1 - - 32 0 0.00 14 9 39.13 87 0 0.00 48 34 41.46 FBXO4 0 genome.wustl.edu 37 5 41929978 41929978 + Missense_Mutation SNP A A C TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 A A A C A A Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 5 41929978 41929978 A C SNP FBXO4 ENST00000281623 human ensembl 74_37 +1 known missense c.605 p.E202A 1.000 NULL pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom - no_errors FBXO4 HGNC ENSG00000151876 tier1 - - 79 0 0.00 64 32 33.33 108 0 0.00 75 39 34.21 MED14 0 genome.wustl.edu 37 X 40585955 40585955 + R SNP G G A TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 G G G A G G Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e X 40585955 40585955 G A SNP MED14 ENST00000463072 human ensembl 74_37 -1 known rna NULL NULL 0.000 - - - no_errors MED14 HGNC ENSG00000180182 tier1 - - 207 0 0.00 102 82 44.57 118 0 0.00 34 31 47.69 TBC1D31 0 genome.wustl.edu 37 8 124132405 124132405 + Missense_Mutation SNP T T C TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 T T T C T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 8 124132405 124132405 T C SNP TBC1D31 ENST00000287380 human ensembl 74_37 +1 known missense c.1547 p.F516S 1.000 pfam_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom - no_errors TBC1D31 HGNC ENSG00000156787 tier1 - - 50 0 0.00 27 22 44.90 91 0 0.00 45 31 40.79 PDLIM5 0 genome.wustl.edu 37 4 95506840 95506840 + Nonsense_Mutation SNP C C T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 C C C T C C Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 4 95506840 95506840 C T SNP PDLIM5 ENST00000317968 human ensembl 74_37 +1 known nonsense c.835 p.Q279* 1.000 NULL pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ - no_errors PDLIM5 HGNC ENSG00000163110 tier1 - - 21 0 0.00 41 14 25.45 38 0 0.00 44 28 38.89 ABCB8 0 genome.wustl.edu 37 7 150730556 150730556 + R SNP T T A TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 T T T A T T Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 7 150730556 150730556 T A SNP ABCB8 ENST00000466956 human ensembl 74_37 +1 known rna NULL NULL 0.000 - - - no_errors ABCB8 HGNC ENSG00000197150 tier1 - - 16 0 0.00 3 9 75.00 40 0 0.00 23 21 47.73 CYFIP2 0 genome.wustl.edu 37 5 156751051 156751053 + In_Frame_Del DEL CTT CTT - TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 CTT CTT CTT - CTT CTT Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 5 156751051 156751053 CTT - DEL CYFIP2 ENST00000318218 human ensembl 74_37 +1 known in_frame_del c.1869_1871 p.F626in_frame_del 1.000:1.000:1.000 pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int - no_errors CYFIP2 HGNC ENSG00000055163 tier1 38 0 0.00 18 5 21.74 54 0 0.00 37 12 24.49 DERL3 0 genome.wustl.edu 37 22 24176678 24176700 + R DEL CAACAGGTCATGTTCAATTTCTT CAACAGGTCATGTTCAATTTCTT - TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 CAACAGGTCATGTTCAATTTCTT CAACAGGTCATGTTCAATTTCTT CAACAGGTCATGTTCAATTTCTT - CAACAGGTCATGTTCAATTTCTT CAACAGGTCATGTTCAATTTCTT Unknown Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 22 24176678 24176700 CAACAGGTCATGTTCAATTTCTT - DEL DERL3 ENST00000464023 human ensembl 74_37 -1 known rna NULL NULL 0.881:0.744:0.541:0.169:0.191:0.247:0.273:0.214:0.004:0.003:0.003:0.004:0.017:0.025:0.031:0.034:0.036:0.045:0.051:0.010:0.016:0.016:0.010 - - - no_errors DERL3 HGNC ENSG00000099958 tier1 64 1 1.54 14 2 12.50 64 1 1.54 14 2 12.50 DCHS1 0 genome.wustl.edu 37 11 6662746 6662748 + In_Frame_Del DEL CAG CAG - TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 CAG CAG Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 11 6662746 6662748 CAG - DEL DCHS1 ENST00000299441 human ensembl 74_37 -1 known in_frame_del c.99_97 p.L33in_frame_del 1.000:1.000:1.000 NULL pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors DCHS1 HGNC ENSG00000166341 tier1 54 0 0.00 38 6 13.64 17 0 0.00 8 0 0.00 FOXC1 0 genome.wustl.edu 37 6 1612142 1612144 + In_Frame_Del DEL GCG GCG - TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 GCG GCG Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 6 1612142 1612144 GCG - DEL FOXC1 ENST00000380874 human ensembl 74_37 +1 known in_frame_del c.1462_1464 p.A491in_frame_del 0.998:0.998:0.994 NULL pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head - no_errors FOXC1 HGNC ENSG00000054598 tier1 26 0 0.00 25 3 10.71 5 0 0.00 4 0 0.00 IBA57 0 genome.wustl.edu 37 1 228362561 228362561 + Silent SNP C C T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 1 228362561 228362561 C T SNP IBA57 ENST00000366711 human ensembl 74_37 +1 known silent c.510 p.C170 0.000 pfam_GCV_T_N pfam_GCV_T_N,pfam_GCV_T_C,tigrfam_YgfZ/GcvT_CS - no_errors IBA57 HGNC ENSG00000181873 tier1 - - 26 0 0.00 24 4 14.29 8 0 0.00 8 0 0.00 MIR4310 0 genome.wustl.edu 37 15 42158730 42158730 + R SNP G G T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 15 42158730 42158730 G T SNP MIR4310 ENST00000582950 human ensembl 74_37 -1 known rna NULL NULL 0.000 - - - no_errors MIR4310 HGNC ENSG00000264850 tier1 - - 22 0 0.00 16 4 20.00 17 0 0.00 9 0 0.00 ENSG00000263120 0 genome.wustl.edu 37 17 55062464 55062465 + R INS - - GAAAA TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 17 55062464 55062465 - GAAAA INS ENSG00000263120 ENST00000572877 human ensembl 74_37 +1 known rna NULL NULL 0.001:0.001 - - - no_errors RP5-1107A17.4 Clone_based_vega_gene ENSG00000263120 tier1 0 0 0.00 0 0 0.00 0 0 0.00 0 0 0.00 ENSG00000268812 0 genome.wustl.edu 37 22 30642572 30642573 + R INS - - G TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 22 30642572 30642573 - G INS ENSG00000268812 ENST00000593843 human ensembl 74_37 +1 known rna NULL NULL 0.129:0.123 - - - no_errors RP1-102K2.8 Clone_based_vega_gene ENSG00000268812 tier1 47 0 0.00 16 2 11.11 2 0 0.00 0 0 0.00 FOXF2 0 genome.wustl.edu 37 6 1391085 1391086 + In_Frame_Ins INS - - GGC TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 6 1391085 1391086 - GGC INS FOXF2 ENST00000259806 human ensembl 74_37 +1 known in_frame_ins c.903_904 p.305in_frame_insG 0.009:0.179 NULL pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head - no_errors FOXF2 HGNC ENSG00000137273 tier1 9 0 0.00 8 3 27.27 1 0 0.00 0 0 0.00 FOXO3 0 genome.wustl.edu 37 6 108882648 108882650 + In_Frame_Del DEL CGG CGG - TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 CGG CGG Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 6 108882648 108882650 CGG - DEL FOXO3 ENST00000343882 human ensembl 74_37 +1 known in_frame_del c.237_239 p.G83in_frame_del 0.964:0.974:0.982 NULL pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head - no_errors FOXO3 HGNC ENSG00000118689 tier1 15 0 0.00 6 2 25.00 1 0 0.00 2 0 0.00 LOC101927601 0 genome.wustl.edu 37 15 82637615 82637615 + Silent SNP A A T TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 15 82637615 82637615 A T SNP LOC101927601 ENST00000439287 human ensembl 74_37 -1 known silent c.471 p.S157 0.083 NULL NULL - no_errors GOLGA6L10 Uniprot_gn ENSG00000205281 tier1 - - 22 0 0.00 16 6 27.27 0 0 0.00 0 0 0.00 MMP17 0 genome.wustl.edu 37 12 132313098 132313099 + In_Frame_Ins INS - - GCTGCCGCT TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 - - Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 12 132313098 132313099 - GCTGCCGCT INS MMP17 ENST00000360564 human ensembl 74_37 +1 known in_frame_ins c.59_60 p.24in_frame_insLPL 0.023:0.052 pirsf_Pept_M10A_Metazoans pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A - no_errors MMP17 HGNC ENSG00000198598 tier1 0 0 0.00 0 0 0.00 0 0 0.00 0 0 0.00 RNF126 0 genome.wustl.edu 37 19 648399 648399 + Missense_Mutation SNP G G C TCGA-Z4-AAPF-01A-11D-A38Z-09 TCGA-Z4-AAPF-10A-01D-A38Z-09 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq 18bdc8dd-e197-4e9f-8b9d-2f340e191aa7 0a413fb9-5f33-44d6-a538-78b9fd54dd0e 19 648399 648399 G C SNP RNF126 ENST00000292363 human ensembl 74_37 -1 known missense c.759 p.D253E 0.992 pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING - no_errors RNF126 HGNC ENSG00000070423 tier1 - - 14 0 0.00 5 5 50.00 4 0 0.00 4 5 55.56