Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV CROCCP2 0 broad.mit.edu 37 1 16956611 16956611 + RNA SNP G G C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . GTCCTGGCTTGCC 96 3 0.03 64 0 0 0 0 AHDC1 27245 broad.mit.edu 37 1 27878527 27878528 + Frame_Shift_Ins INS - - GG novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . AHDC1 NM_001029882 exon6 c.100_101insCC p.T34fs GGGGGGTGGGGGG 47 9 0.19 35 0 0 98 3 0 0.00 NLRP3 114548 mdanderson.org 37 1 247582355 247582355 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_004895 exon1 c.G259T p.A87S GAGAAAGCAAAAA 19 2 0.11 17 0 0 1 0 0.00 TBATA 219793 broad.mit.edu 37 10 72541683 72541683 + Missense_Mutation SNP G G A rs199669673 bycluster TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b C10orf27,colon,carcinoma,0,2 . NM_152710 exon4 c.C151T p.R51W GGATCCGCTCGAA 136 4 0.03 134 0 0 2 0 0 FAM149B1 317662 hgsc.bcm.edu 37 10 74937685 74937685 + Silent SNP C C A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b FAM149B1,NS,carcinoma,0,2 FAM149B1 NM_173348 exon3 c.C234A p.G78G TACAGGCGCAGGG 66 4 0.06 58 0 0 0 2 11 0 0.00 IFIT3 3437 mdanderson.org 37 10 91099835 91099835 + Missense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001031683 exon2 c.G1423A p.V475I GGCGCAGTCAGCT 42 3 0.07 48 0 0 98 0 0.00 RRP12 23223 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 10 99126540 99126540 + Silent SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_015179 exon27 c.G3174A p.E1058E CTCCTCCTCTTCT 57 6 0.11 45 0 0 20 0 0.00 PKD2L1 9033 mdanderson.org 37 10 102059351 102059351 + Missense_Mutation SNP C C A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_016112 exon3 c.G474T p.W158C CACATCCCAGAAG 37 3 0.08 56 0 0 0 0 NFKB2 4791 mdanderson.org 37 10 104159451 104159451 + Missense_Mutation SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001261403 exon13 c.C1445T p.T482M TGCTGACGGCGCA 22 2 0.09 14 0 0 44 0 0.00 CYP17A1 1586 mdanderson.org 37 10 104591290 104591290 + Nonsense_Mutation SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_000102 exon7 c.G1218A p.W406X CTGGTGCCACTCC 45 3 0.07 65 0 0 108 0 0.00 PLEKHS1 79949 mdanderson.org 37 10 115528592 115528592 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_024889 exon6 c.G378T p.W126C AGACTGGGTCTCC 46 3 0.07 33 0 0 0 0 MUC2 4583 mdanderson.org 37 11 1092900 1092900 + Silent SNP A A T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_002457 exon30 c.A4719T p.P1573P AACCCCAACACCC 30 5 0.17 29 1 0.0344827586 0 0 ARL14EP 120534 mdanderson.org 37 11 30354428 30354428 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_152316 exon3 c.G442T p.A148S GCTAAAGCTTTGA 36 3 0.08 48 0 0 74 1 0.01 MAP3K11 4296 broad.mit.edu 37 11 65375896 65375896 + Missense_Mutation SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . MAP3K11 NM_002419 exon2 c.A763G p.S255G CGTCACTCTCAAT 133 4 0.03 139 0 0 67 107 0 0.00 RIN1 9610 mdanderson.org 37 11 66100214 66100214 + Silent SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b RIN1,bladder,carcinoma,+1,1 RIN1 NM_004292 exon10 c.C1885A p.R629R CTACTCGGAGGAG 18 2 0.11 20 0 0 1 1 50 0 0.00 POLD3 10714 mdanderson.org 37 11 74322571 74322571 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_006591 exon4 c.G247T p.D83Y AGAGAAGATAAAT 45 3 0.07 49 0 0 7 0 0.00 ZNF384 171017 mdanderson.org 37 12 6777083 6777083 + Nonsense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001135734 exon11 c.C1531T p.Q511X GCTGCTGCTGCTG 49 3 0.06 44 0 0 76 3 0.04 MLL2 8085 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 49420275 49420275 + Silent SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_003482 exon48 c.G15474A p.E5158E GTCCCGCTCAATG 65 14 0.22 55 0 0 30 1 0.03 TMEM198B 0 broad.mit.edu 37 12 56226581 56226581 + RNA SNP G G C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . CCCCCCGACCCTA 65 15 0.23 39 7 0.1794871795 8 0 0.00 LRP1 4035 mdanderson.org 37 12 57567646 57567646 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_002332 exon22 c.G3430T p.A1144S TCCCTGGCCTGCA 77 4 0.05 61 0 0 30 0 0.00 TMTC3 160418 mdanderson.org 37 12 88568462 88568462 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_181783 exon9 c.G1278T p.W426C AAATTGGGATTGG 116 5 0.04 52 0 0 2 0 0.00 CHFR 0 broad.mit.edu 37 12 133435706 133435707 + Translation_Start_Site INS - - CAT novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . CHFR NM_001161345 exon8 c.895_896insATG p.E299delinsME TCTCCTCCATCTT 103 7 0.07 65 0 0 83 31 0 0.00 APEX1 328 broad.mit.edu 37 14 20923824 20923824 + Missense_Mutation SNP A A G novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . APEX1 NM_080648 exon2 c.A20G p.K7R GGAAAAAGGGAGC 106 4 0.04 97 1 0.0103092784 23 274 1 0.00 C14orf23 387978 hgsc.bcm.edu;bcgsc.ca 37 14 29242602 29242602 + RNA SNP A A G novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . AGGAAAAGGATAT 66 4 0.06 70 0 0 0 0 CDKL1 27109 broad.mit.edu 37 14 50798952 50798952 + Silent SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . CDKL1 . . . . AGGTGGCAGGTAG 76 4 0.05 59 0 0 50 6 0 0.00 . 0 broad.mit.edu 37 14 82384401 82384402 + RNA INS - - A rs199686389 by1000genomes TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . GAGCCAGAAAAAA 6 2 0.33 4 0 0 27 0 0.00 AHNAK2 113146 hgsc.bcm.edu;broad.mit.edu 37 14 105409580 105409580 + Frame_Shift_Del DEL G G - novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_138420 exon7 c.12209delA p.Q4070fs CTATCTGGGGGCC 170 11 0.06 126 0 0 2 0 0.00 GPR176 11245 mdanderson.org 37 15 40093937 40093937 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_007223 exon3 c.C944A p.A315E GGGTTTGCCAGCA 45 3 0.07 43 0 0 15 0 0.00 ZNF213 7760 mdanderson.org 37 16 3191187 3191187 + Missense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001134655 exon6 c.G1219A p.G407S GACTGCGGCAAGA 47 3 0.06 28 0 0 21 0 0.00 CD2BP2 10421 mdanderson.org 37 16 30365009 30365009 + Missense_Mutation SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_006110 exon5 c.A488G p.E163G AGGAGCTCCAAAA 36 3 0.08 24 0 0 148 0 0.00 PLLP 51090 mdanderson.org 37 16 57290893 57290893 + Missense_Mutation SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_015993 exon4 c.A481G p.S161G GGTAGCTGAAGAA 33 3 0.09 23 0 0 64 0 0.00 MINK1 50488 broad.mit.edu 37 17 4790982 4790982 + Missense_Mutation SNP A A T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . MINK1 NM_170663 exon12 c.A1127T p.Q376L AGCTGCAGCAGCA 94 4 0.04 70 1 0.0142857143 110 35 0 0.00 KDM6B 23135 broad.mit.edu 37 17 7751771 7751771 + Missense_Mutation SNP A A C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . KDM6B NM_001080424 exon11 c.A2165C p.Q722P CCCCCCAACCCCC 38 11 0.29 30 3 0.1 95 16 0 0.00 NARR 0 mdanderson.org 37 17 27044263 27044263 + Missense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001256281 exon1 c.C464T p.A155V CCCTCCGCACGGG 35 3 0.09 24 0 0 264 0 0.00 FAM222B 55731 mdanderson.org 37 17 27085505 27085505 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_018182 exon4 c.C1472A p.P491H GCCCCGGGAGCTG 36 3 0.08 23 0 0 26 0 0.00 LOC440434 0 broad.mit.edu 37 17 36357182 36357182 + Silent SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . AAACCATTGATGG 783 9 0.01 632 0 0 34 0 0.00 THRA 7067 broad.mit.edu 37 17 38240101 38240101 + Missense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b THRA_ENST00000450525,NS,carcinoma,0,2 THRA NM_001190918 exon5 c.G236A p.R79H TTCGCCGCACAAT 169 5 0.03 144 1 0.0069444444 88 2 92 0 0.00 NPLOC4 55666 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 79589248 79589248 + Missense_Mutation SNP G G C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_017921 exon3 c.C153G p.N51K GGTCTTGTTTCTA 75 6 0.08 68 0 0 17 4 0.24 MUC16 94025 mdanderson.org 37 19 9033260 9033260 + Silent SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_024690 exon10 c.C36366A p.L12122L TGAATAGAGGTAT 68 4 0.06 57 0 0 0 0 PPAN 56342 mdanderson.org 37 19 10217274 10217274 + Missense_Mutation SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_020230 exon2 c.C116T p.T39M GCTGCACGGGTCG 32 3 0.09 26 0 0 32 0 0.00 ZNF708 7562 mdanderson.org 37 19 21476897 21476897 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_021269 exon4 c.C871A p.Q291K AGGACTGTTTAAA 19 2 0.11 18 0 0 3 0 0.00 FFAR2 2867 mdanderson.org 37 19 35940862 35940862 + Silent SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b FFAR2,NS,carcinoma,0,1 FFAR2 NM_005306 exon1 c.C246T p.C82C CGTCTGCGCCCTC 42 3 0.07 47 0 0 0 1 0 0 CATSPERG 57828 hgsc.bcm.edu 37 19 38858705 38858705 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_021185 exon26 c.G2948T p.W983L TTATCTGGACCAC 81 4 0.05 64 0 0 1 0 0.00 DYRK1B 9149 mdanderson.org 37 19 40321083 40321083 + Missense_Mutation SNP G G T rs367643250 alternate_allele TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_006483 exon4 c.C304A p.R102S CACTGCGCACGAT 49 3 0.06 45 0 0 31 0 0.00 SHKBP1 92799 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 41094564 41094564 + Silent SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_138392 exon14 c.T1371C p.S457S ATGGTCTGTGACT 125 17 0.14 79 0 0 160 11 0.07 APOC4 346 mdanderson.org 37 19 45448465 45448465 + Missense_Mutation SNP T T A rs5167 bycluster;byfrequency;bysubmitter;by2hit2allele;byhapmap;by1000genomes;alternate_allele TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001646 exon3 c.T287A p.L96H GTCCGCTCACCAA 60 2 0.03 50 0 0 0 0 RSPH6A 81492 mdanderson.org 37 19 46303719 46303719 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_030785 exon5 c.C1901A p.A634D GCATAGGCATAGG 30 3 0.10 17 0 0 0 0 KCNS3 3790 broad.mit.edu;mdanderson.org 37 2 18113148 18113148 + Silent SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . KCNS3 NM_002252 exon3 c.C873T p.I291I CCAGATCCTACGG 126 5 0.04 90 0 0 85 5 0 0.00 SOS1 6654 hgsc.bcm.edu 37 2 39237743 39237743 + Missense_Mutation SNP A A G novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_005633 exon15 c.T2492C p.L831P AGAGTGAGGTTGG 67 4 0.06 57 0 0 8 0 0.00 USP34 9736 broad.mit.edu 37 2 61610448 61610448 + Silent SNP G G T rs202087339 bycluster;by1000genomes;alternate_allele TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . USP34 NM_014709 exon6 c.C777A p.P259P GACAGCGGGAATA 318 4 0.01 239 0 0 334 1 0 0.00 ACTR1B 10120 broad.mit.edu;mdanderson.org 37 2 98274702 98274702 + Silent SNP G G A rs146624887 bycluster;byfrequency;by1000genomes TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . ACTR1B NM_005735 exon7 c.C735T p.D245D GCTGCCGTCTGGC 62 4 0.06 44 0 0 34 93 2 0.02 KCNJ13 3769 broad.mit.edu 37 2 233635973 233635973 + Missense_Mutation SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . KCNJ13 NM_001172416 exon2 c.G100A p.A34T TTTGAGCGCCATC 135 4 0.03 100 0 0 18 0 0 SCLY 51540 mdanderson.org 37 2 239006909 239006909 + Silent SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_016510 exon12 c.C1275T p.S425S GCTCAGCGTGGGC 43 3 0.07 42 0 0 10 0 0.00 FRG1B 284802 bcgsc.ca 37 20 29623214 29623214 + Missense_Mutation SNP C C T rs367590609 TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . FRG1B . . . . TGCACTCGACAAT 250 28 0.11 220 10 0.0454545455 181 54 0 0.00 NCOA6 23054 hgsc.bcm.edu 37 20 33345756 33345756 + Silent SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b NCOA6,bladder,carcinoma,0,2 NCOA6 NM_014071 exon7 c.A795G p.Q265Q TTGTTGTTGCTGC 48 2 0.04 40 0 0 0 2 6 0 0.00 LTN1 26046 mdanderson.org 37 21 30304979 30304979 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_015565 exon28 c.C5021A p.A1674D GCTCGAGCTTTAA 46 3 0.07 37 0 0 18 0 0.00 MIRLET7BHG 0 broad.mit.edu 37 22 46505875 46505875 + Silent SNP A A G novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . AGGGGGAGGGCAC 76 3 0.04 60 1 0.0166666667 0 0 PKDREJ 10343 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 22 46658494 46658494 + Silent SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b PKDREJ,colon,carcinoma,0,1 PKDREJ NM_006071 exon1 c.C726T p.N242N CGAGGCGTTGATG 65 8 0.12 55 0 0 0 1 1 0 0.00 FANCD2 2177 ucsc.edu 37 3 10091153 10091153 + Silent SNP C C T rs6785756 bycluster;byfrequency TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . FANCD2 NM_001018115 exon17 c.C1509T p.N503N GTTAAACCCATCT 85 14 0.16 86 7 0.0813953488 253 7 4 0.57 OSBPL10 114884 mdanderson.org 37 3 32022535 32022535 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_017784 exon1 c.C137A p.A46E CCGGCCGCCGCCG 15 2 0.13 13 0 0 0 0 MST1 4485 hgsc.bcm.edu 37 3 49723603 49723603 + Missense_Mutation SNP G G A rs199969873 bycluster;by1000genomes TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b MST1,NS,carcinoma,0,5 MST1 NM_020998 exon9 c.C1039T p.R347W GGTTCCGGCAGAA 68 10 0.15 44 1 0.0227272727 0.005 0 5 14 0 0.00 SDHAP2 0 broad.mit.edu 37 3 195412514 195412515 + RNA INS - - C rs112711528 TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . TTACAGTCCCCTG 7 3 0.43 7 2 0.2857142857 13 0 0.00 OTOP1 133060 mdanderson.org 37 4 4204288 4204288 + Nonsense_Mutation SNP G G T rs150117288 bycluster;alternate_allele TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_177998 exon4 c.C617A p.S206X AACACCGAGTGGA 36 3 0.08 29 0 0 0 0 FAM149A 25854 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 187084616 187084616 + Missense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001006655 exon9 c.G872A p.G291D GGGCAGGTGCTCT 114 12 0.11 100 0 0 13 1 0.08 EGFLAM 133584 broad.mit.edu 37 5 38438444 38438444 + Missense_Mutation SNP C C T rs200259259 TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . EGFLAM NM_001205301 exon17 c.C2351T p.A784V AGAATGCGGCCCA 188 6 0.03 158 0 0 302 28 0 0.00 GZMK 3003 broad.mit.edu 37 5 54329635 54329635 + Missense_Mutation SNP G G A rs200562138 bycluster TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b GZMK,NS,carcinoma,0,1 GZMK NM_002104 exon5 c.G676A p.A226T TTCCACGCTATAG 146 4 0.03 114 0 0 39 1 35 0 0.00 NUDT12 83594 mdanderson.org 37 5 102887928 102887928 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_031438 exon6 c.C1268A p.T423N TCTCTAGTGAACC 45 3 0.07 58 0 0 7 0 0.00 CAMK4 814 mdanderson.org 37 5 110814164 110814164 + Missense_Mutation SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001744 exon9 c.T787C p.S263P TTTATCTCCCCCT 44 3 0.07 34 1 0.0294117647 1 0 0.00 CCDC112 153733 mdanderson.org 37 5 114612674 114612674 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001040440 exon4 c.C439A p.P147T GTGTAGGCTTCAC 43 3 0.07 30 0 0 0 0 APBB3 10307 mdanderson.org 37 5 139941994 139941994 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_133172 exon5 c.C442A p.Q148K GCTGCTGGATACA 32 3 0.09 39 0 0 36 0 0.00 F12 2161 mdanderson.org 37 5 176831071 176831071 + Nonsense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_000505 exon10 c.C1039T p.Q347X GCGGCTGCTCCCG 24 3 0.13 9 0 0 4 0 0.00 BTN2A3P 0 broad.mit.edu 37 6 26422627 26422628 + RNA INS - - A rs34196747 bycluster;by1000genomes TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . . . . . ATTTTCCAAAAAA 9 4 0.44 8 0 0 0 0 MUC21 394263 hgsc.bcm.edu 37 6 30954728 30954728 + Missense_Mutation SNP A A G novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b MUC21,bladder,carcinoma,-1,1 MUC21 NM_001010909 exon2 c.A776G p.E259G ACTCTGAGTCCAG 70 6 0.09 35 1 0.0285714286 -1 1 0 0 BAG6 7917 mdanderson.org 37 6 31608010 31608010 + Missense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_004639 exon23 c.C3122T p.A1041V AGGTAGGCATCAC 77 4 0.05 72 0 0 611 1 0.00 HLA-DMA 3108 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 32917166 32917166 + Silent SNP G G A rs371040586 TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b HLA-DMA,NS,carcinoma,-1,2 HLA-DMA NM_006120 exon4 c.C663T p.N221N CAGTGCGTTCCGG 66 11 0.17 65 0 0 -1 2 632 3 0.00 ORC3 23595 mdanderson.org 37 6 88313102 88313102 + Nonsense_Mutation SNP C C T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_012381 exon4 c.C178T p.R60X TTGTAGCGACTAC 41 3 0.07 40 0 0 21 0 0.00 MCM7 4176 mdanderson.org 37 7 99693551 99693551 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_005916 exon11 c.C1441A p.R481S AGCAGCGGGCATT 47 4 0.09 56 0 0 309 2 0.01 SSPO 23145 broad.mit.edu;mdanderson.org 37 7 149510874 149510874 + RNA SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_198455 exon71 c.G10159T p.G3387C CCTGACGGCTGCA 36 3 0.08 28 0 0 1 0 0.00 CTSL2 1515 broad.mit.edu 37 9 99797977 99797977 + Splice_Site SNP T T C novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . CTSL2 NM_001333 exon7 c.622-2A>G . TCATCCTTTTAAA 66 3 0.05 60 0 0 40 0 0 GRIN3A 116443 mdanderson.org 37 9 104432598 104432598 + Missense_Mutation SNP C C A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_133445 exon3 c.G2096T p.S699I AATGGACTCTTCC 49 3 0.06 50 0 0 1 0 0.00 KIAA0368 23392 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 114134001 114134001 + Missense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001080398 exon44 c.C5171T p.A1724V ATTGATGCCATGG 93 6 0.06 110 0 0 96 21 0.22 NELFB 25920 broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 140150039 140150039 + Silent SNP G G A rs201291926 bycluster;by1000genomes;alternate_allele TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_015456 exon1 c.G78A p.P26P GGAGCCGCTCAAG 57 5 0.09 75 0 0 106 0 0.00 CCDC120 90060 mdanderson.org 37 X 48922190 48922190 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001163321 exon6 c.G719T p.S240I AGCTCAGCCAAGG 42 3 0.07 26 0 0 1 0 0.00 SHROOM4 57477 bcgsc.ca;mdanderson.org 37 X 50438918 50438918 + Missense_Mutation SNP G G T novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . SHROOM4 NM_020717 exon2 c.C137A p.A46E AAAGCTGCCTTGC 62 6 0.10 46 0 0 171 0 0 GAB3 139716 mdanderson.org 37 X 153928305 153928305 + Nonsense_Mutation SNP G G A novel TCGA-2G-AALZ-01A-11D-A42Y-10 TCGA-2G-AALZ-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 20764d97-a509-4c5a-8ab1-fc15b82c0958 b79135a4-1369-4dd1-892e-f72cbed6242b . . NM_001081573 exon5 c.C1099T p.R367X TGTCTCGGTGTCT 52 3 0.06 47 0 0 2 0 0.00