Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV TMEM51-AS1 200197 hgsc.bcm.edu 37 1 15439098 15439098 + RNA SNP C C T rs114844404 bycluster TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . TTTTCTCCTCCCG 76 37 0.49 89 0 0 2 0 0.00 MST1P2 11209 bcgsc.ca 37 1 16976670 16976670 + RNA SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . GCCAGCCGTCTTC 486 75 0.15 593 44 0.0741989882 9 2 0.22 C1orf194 127003 hgsc.bcm.edu 37 1 109650648 109650648 + Nonsense_Mutation SNP A A T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001122961 exon2 c.T57A p.Y19X GTTCTTATATGGC 62 7 0.11 70 0 0 2 1 0.50 DENND1B 163486 hgsc.bcm.edu 37 1 197704897 197704897 + Missense_Mutation SNP G G C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001195216 exon3 c.C112G p.P38A CAGGGGGAATCCT 47 16 0.34 47 0 0 3 1 0.33 IKBKE 0 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 206650044 206650044 + Silent SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . IKBKE NM_001193322 exon7 c.G564A p.A188A GCGGGCGGTGCTT 95 5 0.05 96 0 0 77 4 0 0.00 JMJD1C 221037 mdanderson.org 37 10 64946050 64946050 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_032776 exon19 c.C6664A p.L2222I TCAGGAGATCAGC 41 3 0.07 72 0 0 36 0 0.00 RRP12 23223 mdanderson.org 37 10 99126540 99126540 + Silent SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_015179 exon27 c.G3174A p.E1058E CTCCTCCTCTTCT 64 4 0.06 63 0 0 13 0 0.00 NRAP 4892 mdanderson.org 37 10 115385817 115385817 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001261463 exon21 c.C2233A p.L745I TCTGTAGCTCCTG 43 3 0.07 69 0 0 0 0 MUC2 4583 hgsc.bcm.edu 37 11 1092602 1092619 + In_Frame_Del DEL CCACCACTCCCAGCCCTC CCACCACTCCCAGCCCTC - rs201595190 TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 CCACCACTCCCAGCCCTC CCACCACTCCCAGCCCTC Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . MUC2 NM_002457 exon30 c.4420_4437del p.1474_1479del CTCCAACCACCAC 119 21 0.18 145 0 0 614 6 0 0.00 STK33 65975 mdanderson.org 37 11 8474400 8474400 + Silent SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_030906 exon9 c.G840A p.L280L GGCCTGCAGCATG 72 4 0.06 93 0 0 9 0 0.00 MAP3K11 4296 mdanderson.org 37 11 65380520 65380520 + Silent SNP G G A rs144950486 bycluster;by1000genomes TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_002419 exon1 c.C708T p.P236P GATGACGGGCACC 47 3 0.06 94 0 0 0 84 0 0.00 GPR152 390212 mdanderson.org 37 11 67219522 67219522 + Missense_Mutation SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_206997 exon1 c.G674A p.R225H TGTTGGCGGTGGC 33 3 0.09 28 0 0 0 0 LRP5 4041 mdanderson.org 37 11 68192718 68192718 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_002335 exon15 c.G3385T p.V1129L TTCTGGGTGGACG 16 2 0.13 25 0 0 66 0 0.00 OAF 220323 bcgsc.ca 37 11 120082052 120082052 + Missense_Mutation SNP C C A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . OAF NM_178507 exon1 c.C65A p.P22Q TCGCGCCGCTGCT 20 4 0.20 17 0 0 12 3 0 0.00 VSIG2 23584 mdanderson.org 37 11 124619760 124619760 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_014312 exon4 c.C430A p.P144T TGGGGGGAACTGC 29 2 0.07 41 0 0 84 0 0.00 VWF 7450 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 6127718 6127718 + Silent SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_000552 exon28 c.C4866T p.D1622D CTGGATGTCTCCA 378 39 0.10 131 0 0 194 0 0.00 ATN1 1822 mdanderson.org 37 12 7045915 7045915 + Silent SNP G G A rs148885085 bycluster;byfrequency TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 ATN1,colon,carcinoma,0,1 ATN1 NM_001007026 exon5 c.G1485A p.Q495Q GCAGCAGCAGCAG 180 6 0.03 75 1 0.0133333333 0 0 1 533 1 0.00 ZDHHC17 23390 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 77209655 77209655 + Silent SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . ZDHHC17 NM_015336 exon7 c.G627A p.L209L TAGATTGCTTTTA 333 93 0.28 339 1 0.0029498525 45 2 1 0.50 KL 9365 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 33638015 33638015 + Missense_Mutation SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_004795 exon5 c.G2731A p.G911R CTTTGCGGATACT 138 25 0.18 175 0 0 3 2 0.67 UGGT2 55757 mdanderson.org 37 13 96530037 96530037 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_020121 exon28 c.C3302A p.T1101K TGTTCTGTCACTT 36 3 0.08 73 0 0 11 0 0.00 C14orf159 80017 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 91655323 91655323 + Missense_Mutation SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001102368 exon9 c.C1004T p.A335V CCCATGCCCGCTC 87 17 0.20 106 0 0 84 17 0.20 BDKRB2 624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 96707057 96707057 + Missense_Mutation SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 BDKRB2,NS,carcinoma,0,1 BDKRB2 NM_000623 exon3 c.G392A p.R131H TCTGCCGCGTGGT 46 9 0.20 42 0 0 0 1 2 2 1.00 LIPC 3990 mdanderson.org 37 15 58834136 58834136 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_000236 exon3 c.G426T p.K142N GGGCAAGGAGGTC 30 3 0.10 32 0 0 4 0 0.00 HERC1 8925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 63935695 63935695 + Missense_Mutation SNP T T C rs375304469 TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_003922 exon58 c.A11239G p.I3747V GAGTGATGTGTCC 295 92 0.31 358 0 0 10 4 0.40 TBL3 10607 broad.mit.edu;bcgsc.ca;mdanderson.org 37 16 2024635 2024635 + Missense_Mutation SNP G G T rs138822494 alternate_allele TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . TBL3 NM_006453 exon5 c.G334T p.V112L GCCCCCGTGGCCA 74 5 0.07 53 0 0 54 62 0 0.00 BCL7C 9274 mdanderson.org 37 16 30905198 30905198 + Missense_Mutation SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_004765 exon1 c.C68T p.A23V ATGGTCGCCATCA 40 3 0.08 45 0 0 297 1 0.00 IRX6 79190 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 55363165 55363165 + Silent SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_024335 exon5 c.G1275T p.A425A CTGTGCGCCGTGC 65 15 0.23 60 0 0 9 2 0.22 MTSS1L 92154 mdanderson.org 37 16 70698197 70698197 + Missense_Mutation SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_138383 exon15 c.C1627T p.P543S CGGTGGGCAGCCC 14 2 0.14 32 0 0 31 0 0.00 ANKRD11 29123 mdanderson.org 37 16 89346584 89346584 + Missense_Mutation SNP G G T rs202049186 bycluster;by1000genomes;alternate_allele TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_013275 exon9 c.C6366A p.D2122E GAAGGCGTCCGCC 22 2 0.09 42 0 0 44 0 0.00 MYBBP1A 10514 broad.mit.edu 37 17 4458537 4458537 + Missense_Mutation SNP A A G novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . MYBBP1A NM_014520 exon1 c.T83C p.L28P TTCAATAGGCCAT 115 3 0.03 90 0 0 69 20 0 0.00 CAMTA2 23125 mdanderson.org 37 17 4873732 4873732 + Missense_Mutation SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001171167 exon17 c.C2977T p.R993W GCTCCCGCATTGA 70 4 0.06 66 0 0 74 0 0.00 NLGN2 57555 mdanderson.org 37 17 7311738 7311738 + Missense_Mutation SNP G G T rs377690737 TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 NLGN2,NS,lymphoid_neoplasm,+1,1 NLGN2 NM_020795 exon1 c.G164T p.R55L GTGTGCGGCGCGA 27 3 0.11 29 0 0 1 1 1 0 0.00 TVP23C 0 ucsc.edu 37 17 15457087 15457087 + Missense_Mutation SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic RNA-Seq none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_145301 exon3 c.G152A p.C51Y AGAAGACAGACGA 177 10 0.06 221 9 0.0407239819 21 7 0.33 MAPK7 5598 broad.mit.edu 37 17 19285118 19285118 + Missense_Mutation SNP C C A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 MAPK7,NS,carcinoma,0,2 MAPK7 NM_002749 exon5 c.C1502A p.A501D TGGAGGCTCCTGA 62 6 0.10 48 1 0.0208333333 72 2 76 4 0.05 FLJ36000 0 hgsc.bcm.edu 37 17 21906338 21906338 + RNA SNP G G C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . TCCCACGGTTGTC 57 4 0.07 49 0 0 0 0 CRLF3 51379 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 29123252 29123252 + Missense_Mutation SNP C C T rs368117589 alternate_allele TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_015986 exon4 c.G529A p.V177I ATGCTACTGTTCC 94 22 0.23 100 0 0 14 3 0.21 ATAD5 79915 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 29162850 29162850 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_024857 exon2 c.G1751T p.S584I AAGCCAGCTTGCT 112 16 0.14 119 0 0 2 0 0.00 . 0 broad.mit.edu 37 17 30419203 30419204 + RNA DEL CA CA - novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 CA CA Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . TGCAAGCACACAC 6 2 0.33 6 0 0 0 0 GNA13 10672 mdanderson.org 37 17 63052637 63052637 + Silent SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_006572 exon1 c.C75A p.A25A CTGCTCGGCCTCG 41 3 0.07 45 0 0 17 0 0.00 OTOP3 347741 bcgsc.ca 37 17 72931942 72931942 + Missense_Mutation SNP A A G novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 A A Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . OTOP3 NM_178233 exon1 c.A46G p.R16G TGGGGGAGGGCGT 35 4 0.11 31 0 0 64 0 0 ZSWIM4 65249 mdanderson.org 37 19 13915706 13915706 + Silent SNP C C A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_023072 exon3 c.C456A p.S152S CACGTCCGTGAGC 43 3 0.07 70 0 0 5 0 0.00 ATP1A3 478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42474678 42474678 + Silent SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001256214 exon17 c.C2319T p.D773D TAGGTTGTCGAAG 91 29 0.32 104 0 0 0 0 ZNF574 64763 bcgsc.ca 37 19 42584137 42584155 + Frame_Shift_Del DEL CCGCTGCCCCAGGCACCTA CCGCTGCCCCAGGCACCTA - novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 CCGCTGCCCCAGGCACCTA CCGCTGCCCCAGGCACCTA Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . ZNF574 NM_022752 exon2 c.1379_1397del p.460_466del CAGGGCCCGCTGC 55 5 0.09 59 0 0 57 23 0 0.00 MZF1 7593 mdanderson.org 37 19 59074032 59074032 + Missense_Mutation SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_003422 exon6 c.G1612A p.E538K GCCGCTCGCCACT 10 2 0.20 10 0 0 13 0 0.00 DNAJC27 51277 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 25174379 25174379 + Silent SNP T T C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_016544 exon6 c.A573G p.K191K AGGGCGTTTCCCG 81 15 0.19 95 0 0 3 1 0.33 XDH 7498 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 31620583 31620583 + Missense_Mutation SNP C C T rs148108999 bycluster;by1000genomes TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_000379 exon6 c.G446A p.R149H GTGCAGCGGCACA 88 12 0.14 100 0 0 0 1 1 1.00 ZNF638 27332 hgsc.bcm.edu;bcgsc.ca 37 2 71607352 71607355 + In_Frame_Del DEL AACA AACA - novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 AACA AACA Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . ZNF638 NM_001252612 exon9 c.2266_2268del p.756_756del ACGTAGAACAAAG 266 66 0.25 298 0 0 179 6 0 0.00 LRP2 4036 broad.mit.edu 37 2 170038126 170038126 + Missense_Mutation SNP T T C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . LRP2 NM_004525 exon52 c.A10001G p.Y3334C TAGAGGTACCTGT 143 4 0.03 139 0 0 751 1 0 0.00 PGAP1 80055 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 197791204 197791204 + Missense_Mutation SNP G G C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_024989 exon1 c.C137G p.P46R TACTCCGGGTACT 203 37 0.18 206 0 0 2 1 0.50 ARFGEF2 10564 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 47588957 47588957 + Missense_Mutation SNP G G C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 ARFGEF2,NS,carcinoma,0,1 ARFGEF2 NM_006420 exon11 c.G1520C p.C507S GGATCTGTGCAGG 96 11 0.11 85 0 0 0 1 4 1 0.25 WDR4 10785 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 44273835 44273835 + Silent SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_018669 exon9 c.G819A p.L273L GGCGTCCAGCTGG 48 6 0.13 36 0 0 15 3 0.20 ITGB2 3689 mdanderson.org 37 21 46308737 46308737 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001127491 exon14 c.C1951A p.Q651K ACAGCTGCAGGCC 48 3 0.06 39 0 0 71 0 0.00 MYO18B 84700 ucsc.edu 37 22 26239830 26239830 + Missense_Mutation SNP G G T rs377148843 TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . MYO18B NM_032608 exon18 c.G3337T p.D1113Y GCCCTGGATGCAC 39 4 0.10 41 0 0 322 0 0 GAS2L1 10634 mdanderson.org 37 22 29706886 29706886 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_152237 exon5 c.G908T p.R303L GTCCCCGCCCTGC 24 3 0.13 34 0 0 27 0 0.00 FBLN1 2192 mdanderson.org 37 22 45927186 45927186 + Silent SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_006486 exon5 c.C526T p.L176L CCATATCTGAATG 44 3 0.07 39 0 0 457 0 0.00 . 730211 bcgsc.ca 37 3 183834416 183834416 + RNA SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . GCTTGACCAATAA 31 15 0.48 26 0 0 0 0 IDUA 3425 mdanderson.org 37 4 997352 997352 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_000203 exon12 c.G1666T p.A556S CTCCGCGCCCTGC 35 3 0.09 60 0 0 47 0 0.00 PPARGC1A 10891 broad.mit.edu 37 4 23830066 23830066 + Silent SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 PPARGC1A,NS,malignant_melanoma,-1,2 PPARGC1A NM_013261 exon5 c.C714A p.S238S CTTTTTGGAGGTG 177 4 0.02 239 0 0 129 2 0 0 LNX1-AS1 100873939 hgsc.bcm.edu 37 4 54373461 54373461 + RNA SNP A A T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . CCATCCAGCCTTA 63 20 0.32 79 0 0 0 0 GRID2 2895 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 4 94006231 94006232 + Frame_Shift_Del DEL CG CG - novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 CG CG Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . GRID2 NM_001510 exon3 c.329_330del p.110_110del GGCAGACGCCATG 63 23 0.37 100 0 0 233 0 0 OTUD4 54726 hgsc.bcm.edu 37 4 146059041 146059041 + Silent SNP A A G novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 OTUD4,bladder,carcinoma,0,2 OTUD4 NM_001102653 exon21 c.T2691C p.H897H GGGAGGATGAGCC 101 6 0.06 112 1 0.0089285714 0 2 11 0 0.00 MIER3 166968 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 56219302 56219302 + Missense_Mutation SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_152622 exon13 c.G1303A p.V435I TTACAACAGGCAC 96 14 0.15 116 0 0 6 1 0.17 POLK 51426 broad.mit.edu 37 5 74892821 74892821 + Missense_Mutation SNP T T C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . POLK NM_016218 exon13 c.T2303C p.L768S CTTACTTATGTGA 73 4 0.05 118 0 0 123 6 0 0.00 RPS14 6208 mdanderson.org 37 5 149823857 149823857 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001025070 exon5 c.C448A p.R150S ACAGACGGCGACC 40 3 0.08 36 0 0 2057 3 0.00 FLT4 2324 mdanderson.org 37 5 180038336 180038336 + Silent SNP G G T rs140710164 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 FLT4_ENST00000261937,NS,carcinoma,0,4 FLT4_ENST00000261937 NM_182925 exon27 c.C3681A p.A1227A CCTGGCGGCCAGG 43 3 0.07 58 0 0 0 4 27 0 0.00 JARID2 3720 broad.mit.edu;mdanderson.org 37 6 15501152 15501152 + Missense_Mutation SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . JARID2 NM_004973 exon8 c.G1960A p.D654N GAGCTCGACCTGG 74 4 0.05 57 0 0 135 16 1 0.06 BEND3 57673 mdanderson.org 37 6 107390566 107390566 + Missense_Mutation SNP C C T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001080450 exon5 c.G1829A p.R610H TTGATGCGGGAGG 49 3 0.06 58 0 0 4 0 0.00 . 0 broad.mit.edu 37 7 128210684 128210685 + RNA INS - - T rs201622560 by1000genomes TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . CCATGACCATCCT 12 5 0.42 9 0 0 0 0 . 0 broad.mit.edu 37 7 128210686 128210687 + RNA DEL AT AT - novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 AT AT Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . ATGACCATCCTCC 11 5 0.45 8 0 0 0 0 FAM150A 389658 broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 53477732 53477732 + Missense_Mutation SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . FAM150A NM_207413 exon1 c.C85T p.P29S CCCGGGGCCTCCC 66 8 0.12 49 0 0 6 2 0 0.00 VPS13B 157680 broad.mit.edu 37 8 100866473 100866473 + Missense_Mutation SNP T T C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . VPS13B NM_017890 exon56 c.T10931C p.L3644P GGGCCCTTTTTAG 109 4 0.04 84 0 0 811 13 0 0.00 TATDN1 83940 broad.mit.edu 37 8 125520718 125520718 + Silent SNP T T C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . TATDN1 NM_032026 exon8 c.A513G p.G171G TACCACTCCCCCT 365 8 0.02 290 1 0.0034482759 29 60 0 0.00 GSDMD 79792 mdanderson.org 37 8 144644686 144644686 + Nonsense_Mutation SNP G G T rs144173624 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001166237 exon13 c.G1207T p.E403X CCGCTCGAGCTGG 39 3 0.08 24 0 0 237 0 0.00 EPPK1 83481 mdanderson.org 37 8 144940666 144940666 + Silent SNP G G A rs368004220 TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 EPPK1,NS,carcinoma,0,2 EPPK1 NM_031308 exon1 c.C6756T p.G2252G CAGCACGCCCTTC 62 5 0.08 49 1 0.0204081633 0 2 86 5 0.06 PRUNE2 158471 ucsc.edu;bcgsc.ca 37 9 79253165 79253165 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . PRUNE2 NM_015225 exon13 c.C8768A p.A2923D CAGGCGGCAAACA 29 4 0.14 50 0 0 331 12 0 0.00 GKAP1 80318 mdanderson.org 37 9 86403589 86403589 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 GKAP1,rectum,carcinoma,0,1 GKAP1 NM_001135953 exon5 c.C365A p.T122K TCAGATGTCAGCT 45 3 0.07 48 0 0 0 1 12 0 0.00 TNC 3371 bcgsc.ca;mdanderson.org 37 9 117846507 117846507 + Silent SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . TNC NM_002160 exon4 c.C2112A p.V704V GGCGCTGACAGGA 55 5 0.09 70 0 0 282 14 0 0.00 IER5L 389792 mdanderson.org 37 9 131940157 131940157 + Missense_Mutation SNP G G T novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_203434 exon1 c.C175A p.Q59K GCTGCTGGCGCCG 24 3 0.13 39 0 0 64 0 0.00 SETX 23064 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 135171355 135171355 + Missense_Mutation SNP G G C novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_015046 exon15 c.C6010G p.L2004V ACACGAGGACACG 84 43 0.51 118 0 0 14 7 0.50 C9orf172 389813 mdanderson.org 37 9 139741764 139741764 + Silent SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . NM_001080482 exon1 c.G2898A p.V966V CTGGGTGGCCAGC 24 3 0.13 29 0 0 1 0 0.00 FAM47C 442444 broad.mit.edu 37 X 37028425 37028425 + Missense_Mutation SNP A A G rs145580328 TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . FAM47C NM_001013736 exon1 c.A1942G p.N648D CCTCCCAATACTG 123 5 0.04 109 1 0.0091743119 267 0 0 . 84443 bcgsc.ca 37 X 106846480 106846480 + Silent SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . ACAACAGCAGCAG 201 7 0.03 119 3 0.025210084 0 0 . 286544 bcgsc.ca 37 Y 14107793 14107793 + RNA SNP G G A novel TCGA-2G-AAM3-01A-11D-A435-10 TCGA-2G-AAM3-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 10f7b131-38a9-4636-87e4-f0556ade7b0f fe8b69d7-9bb8-469d-a362-9b55620b0e07 . . . . . . GTGATCGCCTATC 46 12 0.26 85 0 0 0 0