Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV MMEL1 79258 mdanderson.org 37 1 2525328 2525328 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_033467 exon19 c.C1792A p.Q598K GTGGCTGCTCCTT 34 3 0.09 81 0 0 4 0 0.00 MTFR1L 56181 mdanderson.org 37 1 26156254 26156254 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001099625 exon6 c.G706T p.A236S TCCAAGGCCAGCA 48 3 0.06 70 0 0 168 0 0.00 ZMYM6 9204 bcgsc.ca 37 1 35486070 35486070 + Splice_Site SNP T T C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . ZMYM6 NM_007167 exon4 c.94-2A>G . TACTCCTTTAAAA 72 6 0.08 134 0 0 110 0 0 SLC35D1 23169 mdanderson.org 37 1 67519691 67519691 + Silent SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_015139 exon1 c.G6A p.A2A AACTTCCGCCATG 42 3 0.07 82 0 0 6 0 0.00 OVGP1 5016 bcgsc.ca 37 1 111957533 111957533 + Silent SNP C C T rs112145355 bycluster TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . OVGP1 NM_002557 exon11 c.G1590A p.Q530Q CACAGACTGATGA 93 16 0.17 173 2 0.0115606936 177 4 0 0.00 NBPF10 100132406 hgsc.bcm.edu 37 1 145293535 145293535 + Missense_Mutation SNP C C G rs55936365 TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 NBPF10,NS,carcinoma,0,2 NBPF10 NM_001039703 exon1 c.C130G p.L44V TGTTTTCTAACTC 54 5 0.09 60 2 0.0333333333 0 2 20 0 0.00 LOR 4014 hgsc.bcm.edu 37 1 153233506 153233506 + Silent SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 LOR,caecum,carcinoma,0,1 LOR NM_000427 exon2 c.C81T p.G27G TGGCGGCGGCAGC 72 5 0.07 98 1 0.0102040816 0 1 0 0 VSIG8 391123 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 159827898 159827898 + Missense_Mutation SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001013661 exon3 c.G412T p.V138F CAATGACCTTCCG 154 79 0.51 282 1 0.0035460993 0 0 NR1I3 9970 mdanderson.org 37 1 161200619 161200619 + Silent SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 NR1I3_ENST00000428574,NS,carcinoma,0,4 NR1I3_ENST00000428574 NM_001077482 exon8 c.C928A p.R310R GCCTTCGCTGCTG 50 3 0.06 75 0 0 0 4 2 0 0.00 KIF14 9928 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 200529865 200529865 + Silent SNP T T C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_014875 exon26 c.A4215G p.K1405K GGCAGCTTTATTG 206 71 0.34 262 0 0 14 6 0.43 GUK1 2987 mdanderson.org 37 1 228336514 228336514 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001242840 exon7 c.G687T p.W229C GGAGTGGAGGAGA 30 3 0.10 62 0 0 437 0 0.00 ADARB2-AS1 642394 mdanderson.org 37 10 1569023 1569023 + RNA SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . TTGGTGCGTGGAG 47 3 0.06 90 0 0 8 0 0.00 FLJ31813 0 hgsc.bcm.edu 37 10 51814574 51814574 + RNA SNP G G C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . CATTTAGAAAACG 57 22 0.39 86 0 0 0 0 KCNA4 3739 mdanderson.org 37 11 30033833 30033833 + Silent SNP C C T rs369906337 TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_002233 exon2 c.G393A p.E131E CTCTTCCTCCTCC 46 3 0.07 76 0 0 1 0 0.00 MYRF 745 mdanderson.org 37 11 61537721 61537721 + Missense_Mutation SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001127392 exon5 c.C464A p.P155H CAGAGCCCCACCT 33 3 0.09 66 0 0 26 0 0.00 FERMT3 83706 mdanderson.org 37 11 63988602 63988602 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_178443 exon13 c.G1672T p.V558F TCCTATGTCATGG 13 2 0.15 33 0 0 22 0 0.00 CCDC88B 283234 mdanderson.org 37 11 64116835 64116835 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_032251 exon15 c.G2649T p.E883D CAAGGAGTTGGGG 34 4 0.12 81 0 0 6 0 0.00 TPCN2 219931 mdanderson.org 37 11 68837924 68837924 + Missense_Mutation SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_139075 exon9 c.C856T p.R286W AAGAACCGGGCCT 21 2 0.10 80 0 0 25 0 0.00 SRPR 6734 bcgsc.ca 37 11 126136799 126136799 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 SRPR,NS,carcinoma,0,2 SRPR NM_003139 exon5 c.C545A p.A182D CTGGTAGCCAAAG 152 9 0.06 279 6 0.0215053763 60 2 146 3 0.02 RBP5 0 broad.mit.edu 37 12 7281645 7281674 + RNA DEL TTCCTGAGGAAGGAACCTGGAGCAGGATCC TTCCTGAGGAAGGAACCTGGAGCAGGATCC - novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 TTCCTGAGGAAGGAACCTGGAGCAGGATCC TTCCTGAGGAAGGAACCTGGAGCAGGATCC Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . RBP5 . . . . TGGCTTTTCCTGA 6 3 0.50 6 0 0 20 19 0 0.00 LRP6 4040 broad.mit.edu 37 12 12317329 12317329 + Missense_Mutation SNP G G C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 LRP6,NS,carcinoma,+1,2 LRP6 NM_002336 exon9 c.C1930G p.R644G AAATTCGTCTGAT 198 5 0.03 150 0 0 170 2 32 0 0.00 HAL 3034 mdanderson.org 37 12 96389642 96389642 + Missense_Mutation SNP G G T rs188894951 by1000genomes;alternate_allele TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_002108 exon2 c.C47A p.P16H TGGCAGGGCACTG 19 3 0.16 29 0 0 0 0 EID3 493861 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 104698695 104698695 + Missense_Mutation SNP T T A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001008394 exon1 c.T983A p.I328N CTATGATTACATA 87 46 0.53 184 0 0 1 0 0.00 DIS3 22894 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 13 73335570 73335571 + Frame_Shift_Del DEL AT AT - novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 AT AT Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . DIS3 NM_014953 exon19 c.2601_2602del p.867_868del TAAACCATACTTT 105 32 0.30 153 0 0 103 41 0 0.00 MYCBP2 23077 bcgsc.ca;mdanderson.org 37 13 77742671 77742671 + Silent SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . MYCBP2 NM_015057 exon40 c.C6006A p.T2002T TCCTGTGGTGCTA 129 6 0.05 208 1 0.0048076923 1029 5 0 0.00 SOCS4 122809 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 14 55509766 55509766 + Nonsense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_080867 exon2 c.G7T p.E3X ATGGCAGAAAATA 58 27 0.47 107 0 0 8 2 0.25 TTC9 23508 mdanderson.org 37 14 71109248 71109248 + Silent SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_015351 exon1 c.G402T p.L134L CAGCCTGGCAGGT 19 2 0.11 53 0 0 13 0 0.00 CEP128 145508 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 14 81297580 81297612 + In_Frame_Del DEL CAGCTGCACTCTCAAATCTGACATTTGCTTCTC CAGCTGCACTCTCAAATCTGACATTTGCTTCTC - novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 CAGCTGCACTCTCAAATCTGACATTTGCTTCTC CAGCTGCACTCTCAAATCTGACATTTGCTTCTC Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . CEP128 NM_152446 exon12 c.1085_1117del p.362_373del GAAGTTCAGCTGC 193 30 0.16 450 0 0 146 4 0 0.00 CDC42BPB 9578 mdanderson.org 37 14 103416135 103416135 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_006035 exon26 c.C3416A p.P1139H ACACCAGGCTGGG 45 3 0.07 114 0 0 91 0 0.00 HCN4 10021 mdanderson.org 37 15 73615969 73615969 + Missense_Mutation SNP G G T rs201143364 bycluster;by1000genomes;alternate_allele TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_005477 exon8 c.C2465A p.T822K CTTGGCGTCTGCC 20 2 0.10 27 0 0 1 0 0.00 ADAMTS17 170691 ucsc.edu 37 15 100636613 100636613 + Silent SNP G G A rs141443664 TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . ADAMTS17 NM_139057 exon15 c.C2085T p.D695D CTTGCCGTCCCCG 47 4 0.09 61 0 0 127 8 0 0.00 MAPK8IP3 23162 mdanderson.org 37 16 1817206 1817206 + Missense_Mutation SNP T T C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_015133 exon26 c.T3142C p.S1048P CACCACTCCATCC 52 3 0.06 153 0 0 109 1 0.01 NTHL1 4913 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 2094711 2094711 + Missense_Mutation SNP G G A rs376048896 TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_002528 exon3 c.C469T p.R157W GGCCCCGCGCCCG 35 15 0.43 75 0 0 98 44 0.45 SEZ6L2 26470 mdanderson.org 37 16 29888693 29888693 + Missense_Mutation SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001243332 exon11 c.G1808T p.R603L AGGCGGCGGCGCG 35 3 0.09 132 0 0 32 0 0.00 RRAD 6236 mdanderson.org 37 16 66957613 66957613 + Missense_Mutation SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 RRAD,colon,carcinoma,-1,1 RRAD NM_001128850 exon4 c.G455A p.R152H AACCAGCGGCCCC 47 3 0.06 112 0 0 -1 1 13 0 0.00 IL34 146433 mdanderson.org 37 16 70680870 70680870 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001172772 exon2 c.G20T p.W7L TCACCTGGCTGCG 39 3 0.08 62 0 0 0 0 CHST4 10164 mdanderson.org 37 16 71571321 71571321 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001166395 exon2 c.G741T p.Q247H GATGCAGGTCATC 52 3 0.06 104 0 0 3 0 0.00 DPEP1 1800 mdanderson.org 37 16 89702799 89702799 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001128141 exon4 c.G365T p.S122I CCAGCAGTGCAGG 47 3 0.06 154 0 0 1 0 0.00 ZNF286A 57335 broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 15611559 15611559 + Missense_Mutation SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . ZNF286A NM_020652 exon5 c.C332T p.S111L GCTATTCAGGTGA 144 6 0.04 280 0 0 58 47 4 0.09 ABCA6 23460 hgsc.bcm.edu 37 17 67136799 67136799 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_080284 exon2 c.C46A p.L16M TGCACAGAAGTGC 90 4 0.04 122 0 0 1 0 0.00 RNF213 57674 broad.mit.edu 37 17 78262016 78262016 + Missense_Mutation SNP G G A rs199976159 bycluster TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . RNF213 NM_001256071 exon4 c.G664A p.G222S GGGACCGGTCCCC 74 3 0.04 141 0 0 766 6 0 0.00 C19orf35 374872 mdanderson.org 37 19 2275721 2275721 + Silent SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_198532 exon4 c.C1380A p.T460T GGACTCGGTGGCC 27 3 0.11 71 0 0 0 0 DUS3L 56931 mdanderson.org 37 19 5786832 5786832 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_020175 exon9 c.C1414A p.R472S TGTAGCGCTGCTC 51 3 0.06 88 0 0 49 0 0.00 KEAP1 9817 mdanderson.org 37 19 10597469 10597469 + Silent SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_012289 exon6 c.G1734T p.L578L ACTGTCCAGGAAC 52 3 0.06 118 0 0 229 0 0.00 ZNF682 91120 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 19 20117945 20117946 + Frame_Shift_Del DEL CT CT - novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 CT CT Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . ZNF682 NM_033196 exon4 c.366_367del p.122_123del CTTACACTCACCC 110 51 0.46 134 0 0 51 11 0 0.00 . 7617 bcgsc.ca 37 19 20989041 20989041 + Missense_Mutation SNP G G A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . TCAACCGGTCCTC 29 11 0.38 34 0 0 1 1 1.00 CLASRP 11129 bcgsc.ca 37 19 45559754 45559754 + Silent SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . CLASRP NM_007056 exon6 c.C426T p.Y142Y GTTGTACGGAGGC 45 4 0.09 112 0 0 44 112 0 0.00 TRAPPC12 51112 mdanderson.org 37 2 3461436 3461436 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_016030 exon7 c.G1575T p.M525I CGGCATGAGCAGC 15 3 0.20 29 0 0 44 0 0.00 FBXO11 80204 broad.mit.edu 37 2 48036814 48036814 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . FBXO11 NM_001190274 exon20 c.C2371A p.L791I CTTCTAGTGTTGC 104 4 0.04 116 0 0 127 187 0 0.00 VPS54 51542 mdanderson.org 37 2 64160840 64160840 + Nonsense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_016516 exon12 c.C1706A p.S569X GATGATGATGTGT 47 3 0.06 47 0 0 43 0 0.00 TMEM182 130827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 2 103380825 103380825 + Nonsense_Mutation SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_144632 exon3 c.C270A p.Y90X TGCTTACCTGTCT 136 37 0.27 153 0 0 19 4 0.21 LOC100131320 0 broad.mit.edu 37 2 130726529 130726529 + RNA DEL A A - novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . AAGTGCAAAAAAA 11 4 0.36 6 0 0 0 0 PDE6D 64708 broad.mit.edu 37 2 232646544 232646544 + Missense_Mutation SNP G G A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . PDE6D . . . . CAGCCCGCAGAGA 162 4 0.02 193 0 0 8 3 0 0.00 FAM83C 128876 mdanderson.org 37 20 33875775 33875775 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_178468 exon4 c.C807A p.S269R GGTGAAGCTGGGG 33 3 0.09 83 1 0.0120481928 0 0 SLC32A1 140679 broad.mit.edu 37 20 37357187 37357187 + Missense_Mutation SNP G G A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 SLC32A1,NS,carcinoma,0,3 SLC32A1 NM_080552 exon2 c.G1483A p.A495T GACGTCGCCATCT 100 4 0.04 161 0 0 81 3 0 0 COL6A1 1291 mdanderson.org 37 21 47417374 47417374 + Missense_Mutation SNP G G T rs372619016 alternate_allele TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001848 exon21 c.G1438T p.D480Y CGAGGCGATGAGG 45 3 0.07 77 0 0 425 0 0.00 BID 637 mdanderson.org 37 22 18220954 18220954 + Silent SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_197966 exon5 c.G543A p.L181L GGCCTGCAGCAGC 35 3 0.09 63 0 0 118 0 0.00 EMC3 55831 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 10012302 10012302 + Missense_Mutation SNP G G A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 TMEM111,bladder,carcinoma,+1,1 TMEM111 NM_018447 exon6 c.C538T p.R180W TGCTCCGAAGCCC 66 30 0.45 153 0 0 1 1 142 56 0.39 ADCY5 111 broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 123049765 123049765 + Silent SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . ADCY5 NM_183357 exon5 c.G1617A p.E539E GCCCATCTCCACA 191 7 0.04 296 0 0 169 13 0 0.00 MUC4 4585 hgsc.bcm.edu 37 3 195508174 195508174 + Missense_Mutation SNP G G A rs200854768 byfrequency TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 MUC4_ENST00000463781,NS,carcinoma,-1,3 MUC4_ENST00000463781 NM_018406 exon2 c.C10277T p.P3426L GTGACAGGAAGAG 50 3 0.06 79 1 0.0126582278 0.008 -1 3 0 0 TXK 7294 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 48115254 48115254 + Silent SNP C C T rs200958317 by1000genomes TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_003328 exon3 c.G144A p.P48P GAGCCACGGCCTG 56 22 0.39 89 0 0 0 0 0 MEGF10 84466 broad.mit.edu 37 5 126781227 126781227 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . MEGF10 NM_032446 exon21 c.G2570T p.G857V AGATCGGGGCCAT 171 4 0.02 273 0 0 152 5 0 0.00 EGR1 1958 mdanderson.org 37 5 137803157 137803157 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001964 exon2 c.G1019T p.C340F ACGCTTGCCCAGT 42 3 0.07 80 1 0.0125 47 0 0.00 TFAP2D 83741 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 50740418 50740418 + Silent SNP A A C rs375378399 TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 TFAP2D,NS,carcinoma,+1,2 TFAP2D NM_172238 exon8 c.A1200C p.T400T CCAAACAGTTCTC 78 28 0.36 95 0 0 1 2 0 0 COX7A2 1347 mdanderson.org 37 6 75947704 75947704 + Missense_Mutation SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001865 exon4 c.G290T p.G97V GCTGTTCCTAAAA 28 3 0.11 36 0 0 764 0 0.00 TPBG 7162 broad.mit.edu 37 6 83075780 83075780 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . TPBG NM_001166392 exon2 c.G1102T p.A368S ATAGGCGCTATTT 103 4 0.04 167 0 0 37 136 0 0.00 GTF2IRD1P1 0 broad.mit.edu 37 7 66302570 66302570 + RNA DEL C C - novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . TCTCCTCCCACCT 6 2 0.33 8 0 0 0 0 DGKI 9162 broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 137076063 137076063 + Missense_Mutation SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 DGKI_ENST00000288490,NS,carcinoma,+1,2 DGKI NM_004717 exon34 c.G3101T p.R1034I TGTGCTCTTTCTT 100 7 0.07 153 0 0 335 2 4 0 0.00 ABCB8 11194 broad.mit.edu;mdanderson.org 37 7 150741097 150741097 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . ABCB8 NM_007188 exon15 c.G1805T p.R602L AGCAGCGCCTGGC 76 4 0.05 169 0 0 65 42 0 0.00 HTR5A 3361 mdanderson.org 37 7 154862923 154862923 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_024012 exon1 c.G314T p.R105L CCGGGCGCCGCTG 15 2 0.13 35 0 0 0 0 KIF13B 23303 mdanderson.org 37 8 28929560 28929560 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_015254 exon39 c.C4795A p.P1599T CCTCAGGGGCGGT 16 2 0.13 12 0 0 2 0 0.00 PXDNL 137902 mdanderson.org 37 8 52321586 52321586 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_144651 exon17 c.C2598A p.S866R CGCGGGGCTGGAG 36 3 0.08 63 0 0 2 0 0.00 FLJ39080 0 hgsc.bcm.edu;bcgsc.ca 37 8 75516361 75516361 + RNA SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . TCCTCGCGCATCT 58 13 0.22 55 0 0 907 0 0.00 CPSF1 29894 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 145619906 145619906 + Missense_Mutation SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_013291 exon31 c.G3520A p.A1174T ACAGGGCGGTCAC 86 26 0.30 93 0 0 359 97 0.27 KIAA0020 9933 broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 2837296 2837296 + Missense_Mutation SNP T T C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . KIAA0020 NM_014878 exon3 c.A188G p.K63R ACACCCTTTTTCC 133 5 0.04 250 0 0 56 48 0 0.00 FOCAD 54914 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 20819865 20819865 + Missense_Mutation SNP T T C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_017794 exon14 c.T1526C p.I509T ATGATATATTGTA 487 190 0.39 645 0 0 11 5 0.45 CCDC180 0 mdanderson.org 37 9 100128018 100128018 + Silent SNP A A G novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_020893 exon30 c.A4176G p.A1392A AGTCGCAGAGGTG 21 3 0.14 80 0 0 9 0 0.00 DFNB31 25861 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 117266554 117266554 + Silent SNP T T C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001173425 exon1 c.A528G p.L176L CTCAGCTAGAGAG 50 17 0.34 110 0 0 7 2 0.29 P2RY8 286530 mdanderson.org 37 X 1584418 1584418 + Missense_Mutation SNP T T C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_178129 exon2 c.A1034G p.E345G GCTCCCTCCATCC 55 3 0.05 87 1 0.0114942529 1 0 0.00 PPEF1 5475 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 18845518 18845518 + Missense_Mutation SNP C C A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_006240 exon19 c.C1875A p.S625R TGGAAGCATTGAC 213 66 0.31 209 0 0 3 0 0.00 SMS 6611 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 21995231 21995231 + Missense_Mutation SNP G G C novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_004595 exon5 c.G382C p.D128H ACCGCCGACGGGC 232 11 0.05 227 0 0 228 0 0.00 ZNF645 158506 broad.mit.edu 37 X 22291678 22291678 + Silent SNP A A G novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . ZNF645 NM_152577 exon1 c.A570G p.L190L GTCACTACCGTCT 259 7 0.03 198 1 0.0050505051 67 0 0 MAGEB10 139422 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 27839493 27839493 + Missense_Mutation SNP G G A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_182506 exon3 c.G70A p.D24N CTGGAAGATTTGA 159 50 0.31 154 0 0 0 0 DCAF8L1 139425 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 27998407 27998407 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001017930 exon1 c.C1045A p.Q349K CAAATTGGTAAAT 157 10 0.06 140 0 0 0 0 MED14 9282 broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 40569339 40569339 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . MED14 NM_004229 exon9 c.C1065A p.H355Q AACTTTGTGAACA 409 168 0.41 345 2 0.0057971014 108 17 0 0.00 HEPH 9843 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 65479954 65479954 + Missense_Mutation SNP T T A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_138737 exon19 c.T3211A p.Y1071N GAGAACTACCGGG 97 38 0.39 93 0 0 28 0 0.00 COL4A5 1287 mdanderson.org 37 X 107683387 107683387 + Missense_Mutation SNP G G T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_000495 exon1 c.G32T p.G11V CTGCCGGCTTGTT 43 3 0.07 49 0 0 47 0 0.00 COL4A5 1287 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 107929306 107929306 + Missense_Mutation SNP G G A novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_000495 exon46 c.G4244A p.G1415D TCCCTGGCTTTGA 246 14 0.06 205 0 0 186 13 0.07 CHRDL1 91851 mdanderson.org 37 X 109963072 109963072 + Missense_Mutation SNP C C T novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . NM_001143981 exon6 c.G532A p.V178I TGCATACCCGGCA 52 3 0.06 58 0 0 14 0 0.00 MAGEA10-MAGEA5 0 broad.mit.edu 37 X 151290014 151290014 + RNA DEL C C - novel TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . TTTTTTCCTCTTT 11 5 0.45 8 0 0 0 0 TXNRD2 10587 mdanderson.org 37 22 19882962 19882962 + Missense_Mutation SNP G G T rs371153395 alternate_allele TCGA-YU-A94D-01A-11D-A435-10 TCGA-YU-A94D-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6cdf8e7a-91c2-467f-a970-16d9a85624d8 9c956f87-fd2f-4e2b-ab4e-777d60094e09 . . . . . . GTGCCCGTGTCCT 45 3 0.07 105 0 0 66 0 0.00