Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	TVaf_SOL	NTotCov_SOL	NVarCov_SOL	NVaf_SOL	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Ttot_rna	Tvar_rna	Tvaf_rna	note	germline-maf-frequency	IGV
TP73	7161	mdanderson.org	37	1	3607508	3607508	+	Silent	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	TP73_ENST00000378288,NS,carcinoma,0,1	TP73_ENST00000378288	NM_001204190	exon1	c.G39T	p.T13T	CGCCACGGTAGGT		59	3	0.05	105	0	0		0	1	0	0				
NBPF1	55672	broad.mit.edu	37	1	16918653	16918653	+	Splice_Site	SNP	C	C	T	rs75226570		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	AACTTACTGTTGT		39	3	0.08	34	0	0				0	0				
HSPG2	3339	mdanderson.org	37	1	22200901	22200901	+	Silent	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_005529	exon28	c.C3654A	p.G1218G	GCACTGGCCGGCA		44	3	0.07	79	0	0				74	0	0.00			
HTR1D	3352	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	23520342	23520342	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_000864	exon1	c.C371T	p.A124V	ATGGAGGCTGTGC		84	38	0.45	117	0	0				42	19	0.45			
ARID1A	8289	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	27057901	27057901	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_006015	exon3	c.C1609T	p.Q537X	CCCTCCCAGCAGT		106	55	0.52	133	0	0				156	44	0.28			
EPHA10	284656	mdanderson.org	37	1	38227303	38227303	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_173641	exon3	c.C624A	p.Y208X	CTGCTTGTAGTAG		15	2	0.13	26	0	0				0	0				
STRIP1	85369	hgsc.bcm.edu	37	1	110584439	110584439	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_033088	exon8	c.T841C	p.F281L	CCTCACTTTCCCA		96	4	0.04	156	0	0				69	0	0.00			
GATAD2B	57459	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	153784507	153784507	+	Silent	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	GATAD2B,colon,carcinoma,0,1	GATAD2B	NM_020699	exon9	c.G1521A	p.T507T	CCGAAGCGTATGA		70	6	0.09	65	0	0		0	1	53	3	0.06			
SPTA1	6708	broad.mit.edu	37	1	158605702	158605702	+	Splice_Site	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	SPTA1	NM_003126	exon39	c.5432+1G>A	.	CACTCACCGGGCC		123	9	0.07	89	0	0		720		0	0				
LARP4B	23185	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	859126	859126	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_015155	exon18	c.A1957T	p.I653F	GACAAATCTCTGC		145	64	0.44	140	0	0				228	134	0.59			
SKIDA1	387640	broad.mit.edu	37	10	21805483	21805483	+	Silent	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_207371	exon4	c.G1269A	p.E423E	CTCTTCCTCCTCC		40	4	0.10	36	0	0				32	0	0.00			
HERC4	26091	mdanderson.org	37	10	69699401	69699401	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_022079	exon22	c.C2539A	p.Q847K	GTAACTGTTGCAT		109	5	0.05	90	0	0				45	0	0.00			
CDHR5	53841	broad.mit.edu	37	11	617401	617402	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	-	-					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	CDHR5	NM_021924	exon15	c.2488_2489insG	p.R830fs	CACCCCTCCCCGC		83	6	0.07	80	0	0		77		9	0	0.00			
MUC2	4583	mdanderson.org	37	11	1092971	1092971	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	MUC2_ENST00000441003,NS,carcinoma,0,1	MUC2_ENST00000441003	NM_002457	exon30	c.C4790T	p.T1597I	CCCCAACACCCAC		25	2	0.08	34	2	0.0588235294		0	1	0	0				
DCHS1	8642	broad.mit.edu	37	11	6662633	6662633	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	DCHS1	NM_003737	exon2	c.G212A	p.G71D	GCCGTGCCTGCCG		49	3	0.06	48	0	0		277		14	0	0.00			
TPH1	7166	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	18057536	18057536	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	TPH1,NS,carcinoma,+2,1	TPH1	NM_004179	exon2	c.C271A	p.L91I	CTGGTAGATTCAC		94	28	0.30	115	0	0		2	1	2	1	0.50			
TPH1	7166	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	18057614	18057614	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_004179	exon2	c.G193C	p.D65H	CACAGTCAACAAA		123	32	0.26	134	0	0				1	0	0.00			
SLC43A1	8501	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	57281542	57281542	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001198810	exon2	c.A43T	p.M15L	AGGCCATCCACCA		33	13	0.39	45	0	0				13	3	0.23			
SYVN1	84447	mdanderson.org	37	11	64897841	64897841	+	Silent	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_032431	exon12	c.C1116A	p.G372G	CAGGAGGCCCTGG		52	3	0.06	57	0	0				65	0	0.00			
DPP3	10072	broad.mit.edu;ucsc.edu;mdanderson.org	37	11	66260275	66260275	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	DPP3	NM_130443	exon10	c.G1077A	p.W359X	GCCCTGGCCCCCA		107	81	0.76	110	1	0.0090909091		61		84	16	0.19			
CCDC87	55231	mdanderson.org	37	11	66358257	66358257	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_018219	exon1	c.C2230A	p.Q744K	AAGCTTGTCCCTC		40	3	0.08	50	0	0				4	0	0.00			
TSKU	25987	mdanderson.org	37	11	76506691	76506691	+	Missense_Mutation	SNP	G	G	T	rs202220235	bycluster;alternate_allele	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_015516	exon2	c.G31T	p.V11L	CTGGCCGTGAGTG		48	3	0.06	45	0	0				235	0	0.00			
ROBO3	64221	mdanderson.org	37	11	124745971	124745971	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_022370	exon16	c.C2543T	p.A848V	CGGCGGCCACCAG		47	3	0.06	58	0	0				11	0	0.00			
GPR162	27239	broad.mit.edu	37	12	6933730	6933730	+	Silent	SNP	T	T	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	GPR162	NM_019858	exon2	c.T666G	p.G222G	GGGTGGTGGGGGG		83	13	0.16	63	6	0.0952380952		55		2	0	0.00			
EIF4B	1975	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	53410339	53410339	+	Silent	SNP	C	C	G	rs373400973		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001417	exon2	c.C96G	p.T32T	AAGCACCTATGTT		75	17	0.23	60	0	0				410	124	0.30			
PA2G4	5036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	56505268	56505268	+	Silent	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_006191	exon12	c.C1074T	p.L358L	CCTCCTCCAGAGT		214	64	0.30	226	0	0				664	196	0.30			
SYCP3	50511	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	102125386	102125386	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001177949	exon7	c.G512A	p.R171K	TTCAATCTCTGGC		55	16	0.29	74	0	0				0	0				
FRY	10129	mdanderson.org	37	13	32776178	32776178	+	Splice_Site	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_023037	exon30	c.3846+1G>T	.	ATGCAGGCACGTA		49	3	0.06	72	0	0				0	0				
TFDP1	7027	mdanderson.org	37	13	114294482	114294482	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_007111	exon12	c.G1133C	p.G378A	CCAATGGGTCTCA		24	2	0.08	57	0	0				388	0	0.00			
HECTD1	25831	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	14	31576895	31576897	+	In_Frame_Del	DEL	CTC	CTC	-	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	CTC	CTC					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	HECTD1	NM_015382	exon37	c.6495_6497del	p.2165_2166del	CTTCTTCTCCTAA		78	17	0.22	120	0	0		159		103	0	0.00			
SIX4	51804	mdanderson.org	37	14	61190366	61190366	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_017420	exon1	c.C427A	p.R143S	TGCCACGTAGCAG		49	3	0.06	69	0	0				0	0				
C14orf159	80017	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	91642295	91642295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001102368	exon7	c.G625A	p.E209K	ATCAAAGAGCTTT		96	13	0.14	119	0	0				18	1	0.06			
DICER1	23405	mdanderson.org	37	14	95579466	95579466	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001271282	exon12	c.A2003G	p.Y668C	GGCAGATAAAGAG		93	4	0.04	101	0	0				79	3	0.04			
AK7	122481	broad.mit.edu;mdanderson.org	37	14	96858506	96858506	+	Silent	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	AK7	NM_152327	exon1	c.G15A	p.E5E	AGAAGAGGAAACT		55	5	0.09	63	0	0		69		11	1	0.09			
SPTBN5	51332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	42156128	42156128	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_016642	exon40	c.G6908A	p.R2303Q	CTTCGCCGCTGGC		39	6	0.15	54	0	0				10	2	0.20			
HERC1	8925	broad.mit.edu;mdanderson.org	37	15	64019909	64019909	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	HERC1	NM_003922	exon17	c.C3283A	p.L1095I	TATTAAGGCAATC		138	5	0.04	239	0	0		624		5	0	0.00			
STRA6	64220	mdanderson.org	37	15	74488353	74488353	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001199042	exon5	c.C519A	p.S173R	ACCTTGGCTGGGT		44	3	0.07	61	0	0				23	0	0.00			
CACNA1H	8912	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	1254228	1254228	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_021098	exon10	c.G2221A	p.D741N	CGCTGGGACCCCA		80	24	0.30	100	0	0				2	1	0.50			
CREBBP	1387	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	3900553	3900554	+	Frame_Shift_Del	DEL	AA	AA	-	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	AA	AA					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	CREBBP	NM_001079846	exon2	c.543_544del	p.181_182del	CTGGTTAAAGTTA		62	17	0.27	82	0	0		546		76	0	0.00			
CDR2	1039	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	22376333	22376333	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001802	exon2	c.C82T	p.L28F	GTTGAAGATCTAG		83	36	0.43	84	0	0				48	26	0.54			
.	0	broad.mit.edu	37	16	32077601	32077601	+	RNA	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	CTCCAGGGACAAC		191	8	0.04	272	1	0.0036764706				0	0				
HERPUD1	9709	mdanderson.org	37	16	56973165	56973165	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_014685	exon5	c.C448A	p.Q150K	GCCCAGCAGGCAT		44	3	0.07	68	0	0				93	0	0.00			
NEURL4	84461	mdanderson.org	37	17	7224486	7224486	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_032442	exon20	c.C3305A	p.S1102X	GTGTCTGAACTGG		51	3	0.06	66	0	0				143	0	0.00			
TVP23C	0	ucsc.edu	37	17	15457087	15457087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic		RNA-Seq	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_145301	exon3	c.G152A	p.C51Y	AGAAGACAGACGA		268	11	0.04	281	18	0.0640569395				120	40	0.33			
TRIM16	10626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	15532122	15532122	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_006470	exon9	c.T1502A	p.F501Y	CCCGGGAAGTCGA		166	49	0.30	169	0	0				35	11	0.31			
LOC440434	729873	bcgsc.ca	37	17	36352419	36352420	+	Splice_Site	INS	-	-	C	rs57163173	bycluster	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	-	-					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	TTTTTTTACCTTA		260	25	0.10	309	0	0				4	1	0.25			
KRT9	3857	broad.mit.edu	37	17	39728194	39728194	+	Silent	SNP	A	A	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	KRT9	NM_000226	exon1	c.T51G	p.G17G	CCCGCCACCCCCG		29	15	0.52	41	6	0.1463414634		78		0	0				
PPM1D	8493	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	17	58740737	58740737	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_003620	exon6	c.A1642T	p.K548X	CTGATGAAGAAGC		84	26	0.31	109	0	0				44	16	0.36			
FTSJ3	117246	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	61898885	61898886	+	Frame_Shift_Del	DEL	TG	TG	-	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	TG	TG					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	FTSJ3	NM_017647	exon16	c.1715_1716del	p.572_572del	GGTGTCTGTGGCA		64	0	0.00	75	0	0		63		128	0	0.00			
QRICH2	84074	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	74288014	74288014	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_032134	exon4	c.G2296A	p.V766I	GTTGTACCAGGCC		117	13	0.11	102	0	0				5	0	0.00			
EMILIN2	84034	mdanderson.org	37	18	2913083	2913083	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_032048	exon8	c.A2843G	p.Y948C	CTCCTTATGATGG		20	3	0.15	52	1	0.0192307692				56	1	0.02			
PRSS57	400668	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	686926	686926	+	Missense_Mutation	SNP	G	G	A	rs372538839		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_214710	exon4	c.C644T	p.S215L	CTTACCGAGCAGA		72	26	0.36	130	0	0				0	0				
MUC16	94025	mdanderson.org	37	19	9024140	9024140	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_024690	exon18	c.C37132A	p.P12378T	TTGTGGGGCTGGA		57	3	0.05	118	0	0				0	0				
C19orf66	55337	mdanderson.org	37	19	10200662	10200662	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_018381	exon5	c.G323T	p.R108L	TGGACCGGCAGTT		54	3	0.06	106	0	0				11	0	0.00			
PRKCSH	5589	hgsc.bcm.edu	37	19	11558370	11558370	+	Silent	SNP	G	G	A	rs77563879	bycluster	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	PRKCSH,caecum,carcinoma,0,1	PRKCSH	NM_001001329	exon11	c.G966A	p.E322E	GGAGGAGGAAGAA		45	4	0.09	52	0	0		0	1	132	0	0.00			
KCTD15	79047	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	34292141	34292141	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001129995	exon4	c.C136A	p.P46T	GGCATCCCCCTGC		46	13	0.28	65	0	0				166	53	0.32			
LRFN3	79414	broad.mit.edu;mdanderson.org	37	19	36435792	36435792	+	Silent	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	LRFN3	NM_024509	exon3	c.C1758T	p.T586T	CCAGACCAACGGC		11	4	0.36	13	0	0		43		14	4	0.29			
STRN4	29888	mdanderson.org	37	19	47232034	47232034	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001039877	exon7	c.C880A	p.L294I	ATGGGAGCTGGCA		54	3	0.06	60	0	0				452	0	0.00			
FUZ	80199	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	50312451	50312451	+	Missense_Mutation	SNP	G	G	T	rs376948728	alternate_allele	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_025129	exon7	c.C755A	p.P252Q	GGGCTCGGCCCGC		67	18	0.27	115	0	0				83	31	0.37			
SYT3	84258	mdanderson.org	37	19	51135704	51135704	+	Silent	SNP	T	T	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_032298	exon2	c.A513T	p.A171A	TGCTGCTGCAGCC		39	3	0.08	70	0	0				0	0				
C2orf16	84226	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	27800712	27800712	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	C2orf16_ENST00000408964,colon,carcinoma,0,2	C2orf16_ENST00000408964	NM_032266	exon1	c.A1273T	p.S425C	CAAACAAGTCAAG		107	30	0.28	100	0	0		0	2	1	0	0.00			
C2orf81	388963	hgsc.bcm.edu;mdanderson.org	37	2	74642265	74642265	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	C2orf81,colon,carcinoma,0,1	C2orf81	NM_001145054	exon4	c.T958G	p.S320A	GGCAGGACGCGGA		69	4	0.06	79	1	0.0126582278		0	1	4	0	0.00			
HTRA2	27429	broad.mit.edu	37	2	74757160	74757160	+	Silent	SNP	T	T	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	HTRA2	NM_013247	exon1	c.T27G	p.G9G	GCGGGGTGCAGGC		58	21	0.36	40	8	0.2		22		3	0	0.00			
.	0	bcgsc.ca	37	2	91795573	91795573	+	RNA	SNP	G	G	A	rs77931968	byfrequency	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	AACGGCGTCCTCA		153	11	0.07	109	1	0.0091743119				0	0				
RGPD4	285190	ucsc.edu	37	2	108487826	108487826	+	Silent	SNP	C	C	T	rs62150212	byfrequency;by1000genomes	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	RGPD4	NM_182588	exon20	c.C3366T	p.P1122P	GAAGCCCCTGTCT		18	11	0.61	19	2	0.1052631579		112		4	0	0.00			
UBXN4	23190	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	136528187	136528187	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_014607	exon8	c.T704A	p.M235K	AAGAAATGTTGGA		361	91	0.25	349	0	0				203	53	0.26			
ACVR2A	92	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	148657362	148657362	+	Silent	SNP	C	C	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001616	exon4	c.C423G	p.L141L	CCTGCTCTATTCC		230	68	0.30	251	0	0				34	12	0.35			
ASNSD1	54529	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	190535267	190535267	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	ASNSD1	NM_019048	exon6	c.C1747T	p.L583F	AAATTACTTTTAC		253	53	0.21	270	1	0.0037037037		63		179	30	0.17			
CRNKL1	51340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	20033204	20033204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_016652	exon2	c.C266T	p.T89M	CAGCGCGTGGAGT		56	20	0.36	63	0	0				0	0				
ZFP64	55734	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	20	50769116	50769116	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_018197	exon6	c.C1615T	p.R539W	GCAGCCGGCTGTT		21	7	0.33	14	0	0				58	22	0.38			
BAGE2	85319	bcgsc.ca	37	21	11058295	11058295	+	RNA	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_182482	exon3	c.C145T	p.P49S	ATAGTGGCTCCAA		219	10	0.05	271	3	0.0110701107				0	0				
SYNJ1	8867	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	34050984	34050984	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	SYNJ1,rectum,carcinoma,-1,1	SYNJ1	NM_203446	exon12	c.G1598A	p.R533Q	AGTGCTCGAGCTT		171	34	0.20	184	0	0		-1	1	10	2	0.20			
YWHAH	7533	mdanderson.org	37	22	32352743	32352743	+	Silent	SNP	C	C	T	rs377641891		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_003405	exon2	c.C705T	p.S235S	GACGAGCGACCAG		46	3	0.07	58	0	0				542	0	0.00			
MEI1	150365	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	42126573	42126573	+	Missense_Mutation	SNP	C	C	T	rs374534859		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_152513	exon9	c.C1028T	p.S343F	TCTGGTCCAGCTG		95	87	0.92	129	1	0.007751938				0	0				
TUBGCP6	85378	mdanderson.org	37	22	50659727	50659727	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_020461	exon16	c.C3061A	p.P1021T	CTGTGGGCTGGCT		46	5	0.11	69	0	0				53	0	0.00			
FANCD2	2177	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	10132048	10132048	+	Silent	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001018115	exon37	c.C3756T	p.G1252G	GCCTGGCACAGCA		52	27	0.52	56	0	0				151	111	0.74			
PARP15	165631	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	122296590	122296590	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001113523	exon1	c.G76C	p.V26L	CACGGAGTTGCAG		124	81	0.65	113	0	0				1	0	0.00			
EFCC1	79825	broad.mit.edu	37	3	128721009	128721011	+	In_Frame_Del	DEL	CGC	CGC	-	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	CGC	CGC					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_024768	exon1	c.538_540del	p.180_180del	CGTCCGCGCCGCC		6	2	0.33	10	0	0				0	0				
TTC14	151613	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	180320071	180320071	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001042601	exon1	c.C22G	p.Q8E	TTGCGGCAGTCGC		56	16	0.29	45	0	0				28	10	0.36			
TP63	8626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	3	189586470	189586470	+	Nonsense_Mutation	SNP	C	C	A	rs147148566	alternate_allele	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	TP63_ENST00000418709,mucosal,malignant_melanoma,0,6	TP63_ENST00000418709	NM_001114979	exon8	c.C1094A	p.S365X	AAGTTTCGGACAG		131	48	0.37	112	0	0		0	6	0	0				
SDHAP2	0	broad.mit.edu;ucsc.edu	37	3	195400728	195400728	+	RNA	SNP	A	A	G	rs77981248		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	GTGCCCAGCCTGT		103	11	0.11	88	0	0				26	0	0.00			
NFXL1	152518	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	47901125	47901125	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	NFXL1	NM_152995	exon7	c.C839T	p.P280L	GGACAAGGAGGGC		76	32	0.42	132	2	0.0151515152		79		33	19	0.58			
CNGA1	1259	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	47939764	47939764	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001142564	exon10	c.T954G	p.D318E	CAGAACATCAAGT		109	42	0.39	184	0	0				1	0	0.00			
GPM6A	2823	hgsc.bcm.edu	37	4	176923708	176923708	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001261447	exon1	c.G34A	p.G12R	CCTCCCCAGAGGC		19	10	0.53	16	0	0				0	0				
HSD17B4	3295	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	118809607	118809607	+	Silent	SNP	T	T	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	HSD17B4	NM_001199291	exon4	c.T192C	p.N64N	AGTGAATGATTTG		80	33	0.41	118	0	0		63		169	86	0.51			
PCDHB6	56130	mdanderson.org	37	5	140531342	140531342	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_018939	exon1	c.G1504T	p.V502F	TCCCTGGTCTCCA		34	3	0.09	54	0	0				8	0	0.00			
.	0	bcgsc.ca	37	5	153873611	153873611	+	RNA	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	AAGAAACAAAGAG		66	25	0.38	95	0	0				0	0				
SQSTM1	8878	mdanderson.org	37	5	179251214	179251214	+	Silent	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_003900	exon4	c.G564T	p.V188V	GAAGGTGAAACAC		48	4	0.08	99	0	0				355	0	0.00			
MIR340	442908	hgsc.bcm.edu;ucsc.edu;mdanderson.org	37	5	179442323	179442323	+	RNA	SNP	T	T	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	TGGCTATAAAGTA		142	61	0.43	289	0	0				0	0				
FOXQ1	94234	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	1313345	1313345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_033260	exon1	c.G406A	p.A136T	GACTCGGCGGGCG		49	18	0.37	55	0	0				55	19	0.35			
SKIV2L	6499	mdanderson.org	37	6	31931201	31931201	+	Missense_Mutation	SNP	G	G	T	rs144001502	alternate_allele	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_006929	exon14	c.G1415T	p.R472L	TGAAGCGTCGTCA		45	3	0.07	57	0	0				138	0	0.00			
TAB2	23118	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	149699839	149699839	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_015093	exon5	c.A788G	p.N263S	CATCTAATCCTCT		84	15	0.18	127	0	0				113	33	0.29			
RAET1K	646024	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	150322744	150322744	+	RNA	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	TCACACCATCGTG		109	28	0.26	231	0	0				4	0	0.00			
CCT6P3	0	broad.mit.edu	37	7	64528813	64528814	+	RNA	INS	-	-	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	-	-					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	CTGTAACTTTTTT		13	4	0.31	22	0	0				1	0	0.00			
AGFG2	3268	mdanderson.org	37	7	100137130	100137130	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_006076	exon1	c.G161T	p.G54V	AGCGCGGGGTCAC		28	3	0.11	24	0	0				83	0	0.00			
C7orf55-LUC7L2	0	broad.mit.edu	37	7	139060888	139060888	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001244584	exon3	c.G340T	p.V114F	CATGATGTCCTTT		130	4	0.03	148	1	0.0067567568				168	0	0.00			
C7orf55-LUC7L2	100996928	mdanderson.org	37	7	139086888	139086888	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001244584	exon5	c.G459T	p.M153I	GGCCATGGATCAT		42	3	0.07	44	0	0				213	0	0.00			
PRSS3P2	154754	hgsc.bcm.edu	37	7	142479004	142479004	+	RNA	SNP	A	A	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	TGGCATATCTCCT		23	6	0.26	20	0	0				0	0				
PRSS3P2	154754	hgsc.bcm.edu	37	7	142479016	142479016	+	RNA	SNP	T	T	C	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	TTCCCATCCTCCT		18	6	0.33	17	0	0				0	0				
PRSS3P2	154754	hgsc.bcm.edu	37	7	142479029	142479029	+	RNA	SNP	C	C	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	TGGGCTCTCTTTA		18	5	0.28	12	0	0				0	0				
GPR124	25960	mdanderson.org	37	8	37687462	37687462	+	Silent	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_032777	exon6	c.G648T	p.T216T	ACACACGCTCTGT		31	3	0.10	52	0	0				34	0	0.00			
ZFHX4	79776	hgsc.bcm.edu;broad.mit.edu	37	8	77767796	77767797	+	In_Frame_Ins	INS	-	-	CGACCA	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	-	-					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	ZFHX4	NM_024721	exon10	c.8639_8640insCGACCA	p.G2880delinsGDH	AAGATGGCGACCA		65	15	0.23	95	0	0		878		0	0				
CSMD3	114788	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	113308062	113308062	+	Missense_Mutation	SNP	G	G	T	rs199825870	by1000genomes;alternate_allele	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_198123	exon54	c.C8614A	p.P2872T	ACTTACGCACACA		82	29	0.35	146	0	0				2	2	1.00			
MAFA	389692	broad.mit.edu	37	8	144511954	144511956	+	In_Frame_Del	DEL	TGG	TGG	-	rs141816879	bycluster;by1000genomes;alternate_allele	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	TGG	TGG					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	MAFA	NM_201589	exon1	c.621_623del	p.207_208del	CCGCCATGGTGGT		6	4	0.67	8	0	0		9		0	0				
EEF1D	1936	broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	144663434	144663434	+	Missense_Mutation	SNP	G	G	C	rs11548168	alternate_allele	TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	EEF1D	NM_001130053	exon6	c.C1352G	p.A451G	AGACTGGCAATCC		40	12	0.30	68	0	0		48		959	406	0.42			
PLEC	5339	broad.mit.edu	37	8	144999684	144999684	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	PLEC	NM_201380	exon31	c.4824delT	p.A1608fs	CCCCTCAGCCCCG		6	2	0.33	8	0	0		1144		43	0	0.00			
ZNF16	7564	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	146156383	146156383	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_006958	exon3	c.G1790A	p.G597E	TTTTCCCCAGTAT		60	29	0.48	90	0	0				25	15	0.60			
TLR4	7099	broad.mit.edu	37	9	120475855	120475855	+	Silent	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	TLR4,NS,carcinoma,0,1	TLR4	NM_138554	exon3	c.C1449T	p.F483F	TTCTTTCCAGGAA		101	7	0.07	155	7	0.0451612903		220	1	5	0	0.00			
PIP5KL1	138429	mdanderson.org	37	9	130692122	130692122	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001135219	exon2	c.T73C	p.S25P	GGCTGGAGGTGAC		23	2	0.09	39	0	0				0	0				
C9orf173	441476	hgsc.bcm.edu	37	9	140145760	140145760	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_001256701	exon1	c.G22T	p.A8S	CAGAAGGCAGTGA		98	4	0.04	128	0	0				23	0	0.00			
ND6	4541	broad.mit.edu;bcgsc.ca	37	MT	14600	14600	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	G	G					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	ENST00000361681	exon1	c.C74T	p.P25L	TAAATAGGAGAAG		120	7	0.06	169	1	0.0059171598				0	0				
POLA1	5422	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	24751914	24751914	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	A	A					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_016937	exon17	c.A1796G	p.K599R	CTTTCAAAGAAGT		527	242	0.46	475	1	0.0021052632				21	17	0.81			
TAF9B	51616	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	77393365	77393365	+	Missense_Mutation	SNP	C	C	T	rs372088655		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	NM_015975	exon4	c.G286A	p.A96T	GCCTTGCGATATC		314	138	0.44	295	0	0				149	39	0.26			
.	0	broad.mit.edu	37	X	136058330	136058330	+	RNA	DEL	T	T	-	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	T	T					Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	AGGGGATTTTTTT		6	2	0.33	4	0	0				0	0				
KRBA1	84626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	149430318	149430318	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-YU-A94I-01A-11D-A435-10	TCGA-YU-A94I-10A-01D-A438-10	C	C					Unknown	Untested	Somatic	.	WXS	none			Illumina HiSeq	7f459a1b-ea13-4396-89b1-50daa8059835	713aeca6-9e16-4d10-8691-0227db471977	.	.	.	.	.	.	CTGCTCCCCCAGG		82	31	0.38	96	0	0				28	5	0.18