Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
ZRANB1	0	genome.wustl.edu	37	10	126670294	126670294	+	Missense_Mutation	SNP	A	A	G			TCGA-XU-A932-01A-11D-A423-09	TCGA-XU-A932-10A-01D-A426-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	5bc8aec2-abe8-423d-9f9b-55ef130ab50f	4e80d3f2-418b-40d7-9afa-07003b2656e9	10	126670294	126670294	A	G	SNP	ZRANB1	ENST00000359653	human	ensembl	74_37	1	known	missense	c.1444	p.K482E	1	pfam_OTU,pfscan_OTU	pfam_OTU,pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_OTU,pfscan_Znf_RanBP2	0	no_errors	0	0	0	66	0	0	76	9	10.59	186	0	0.00	162	11	6.32
NUP160	0	genome.wustl.edu	37	11	47839662	47839662	+	Silent	SNP	T	T	C			TCGA-XU-A932-01A-11D-A423-09	TCGA-XU-A932-10A-01D-A426-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	5bc8aec2-abe8-423d-9f9b-55ef130ab50f	4e80d3f2-418b-40d7-9afa-07003b2656e9	11	47839662	47839662	T	C	SNP	NUP160	ENST00000378460	human	ensembl	74_37	-1	known	silent	c.1377	p.Q459	0.841	pfam_Nucleoporin_Nup160	pfam_Nucleoporin_Nup160	0	no_errors	0	0	0	62	0	0	96	10	9.43	333	0	0.00	298	24	7.45
COL6A1	0	genome.wustl.edu	37	21	47417640	47417640	+	Silent	SNP	C	C	T			TCGA-XU-A932-01A-11D-A423-09	TCGA-XU-A932-10A-01D-A426-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	5bc8aec2-abe8-423d-9f9b-55ef130ab50f	4e80d3f2-418b-40d7-9afa-07003b2656e9	21	47417640	47417640	C	T	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	1	known	silent	c.1488	p.A496	0.001	pfam_Collagen	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	0	no_errors	0	0	0	97	0	0	76	9	10.59	79	0	0.00	47	3	6.00
MT-CO1	0	genome.wustl.edu	37	MT	6331	6331	+	Missense_Mutation	SNP	T	T	C			TCGA-XU-A932-01A-11D-A423-09	TCGA-XU-A932-10A-01D-A426-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5bc8aec2-abe8-423d-9f9b-55ef130ab50f	4e80d3f2-418b-40d7-9afa-07003b2656e9	MT	6331	6331	T	C	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	1	known	missense	c.428	p.V143A	NULL	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	0	no_errors	0	0	0	8	0	0	8	5	38.46	6	0	0.00	0	0	0.00
MT-ND6	0	genome.wustl.edu	37	MT	14587	14587	+	Silent	SNP	A	A	C			TCGA-XU-A932-01A-11D-A423-09	TCGA-XU-A932-10A-01D-A426-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5bc8aec2-abe8-423d-9f9b-55ef130ab50f	4e80d3f2-418b-40d7-9afa-07003b2656e9	MT	14587	14587	A	C	SNP	MT-ND6	ENST00000361681	human	ensembl	74_37	-1	known	silent	c.87	p.G29	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	0	no_errors	0	0	0	268	0	0	381	33	7.93	3	0	0.00	1	0	0.00
GJA3	0	genome.wustl.edu	37	13	20716656	20716657	+	Frame_Shift_Ins	INS	-	-	G			TCGA-XU-A932-01A-11D-A423-09	TCGA-XU-A932-10A-01D-A426-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5bc8aec2-abe8-423d-9f9b-55ef130ab50f	4e80d3f2-418b-40d7-9afa-07003b2656e9	13	20716656	20716657	0	G	INS	GJA3	ENST00000241125	human	ensembl	74_37	-1	known	frame_shift_ins	c.772_771	p.S257fs	0.000:0.000	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin46	0	no_errors	0	0	0	18	0	0	18	2	10	16	0	0.00	6	0	0.00