Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID transcript_name strand transcript_status amino_acid_change ucsc_cons normal_depth normal_vaf tumor_depth tumor_vaf rna_depth rna_vaf polyphen sift condel domain ARID1A 8289 genome.wustl.edu 37 1 27087503 27087503 + Nonsense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_006015.4 +1 reviewed p.R693* 1.000 141 0% 169 35.5% 2 50% - - - NULL ARID1A 8289 genome.wustl.edu 37 1 27094291 27094292 + Frame_Shift_Ins INS - - T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_006015.4 +1 reviewed p.S1001fs 1.000:1.000 - - - - - - - - - superfamily_ARID-like AGBL4 84871 genome.wustl.edu 37 1 50163038 50163038 + Missense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_032785.3 -1 validated p.P77T 1.000 147 0% 73 26% 0 - possibly_damaging(0.895) deleterious(0.01) deleterious(0.758) NULL TYW3 127253 genome.wustl.edu 37 1 75229758 75229758 + Silent SNP T T C novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_138467.2 +1 validated p.D247 0.000 331 0% 65 29.2% 18 44.4% - - - NULL VCAM1 7412 genome.wustl.edu 37 1 101200075 101200104 + In_Frame_Del DEL AAACTTACAGCTTTTCCTTCTGAGAGTGTC AAACTTACAGCTTTTCCTTCTGAGAGTGTC - novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 AAACTTACAGCTTTTCCTTCTGAGAGTGTC AAACTTACAGCTTTTCCTTCTGAGAGTGTC Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001078.2 +1 reviewed p.LTAFPSESVK605in_frame_del 0.000:0.000:0.001:0.995:1.000:0.998:0.998:0.994:0.998:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.996:1.000:0.999:0.969:0.956:0.947:0.767:0.774:0.696:0.482:0.571:0.589:0.535 - - - - - - - - - superfamily_Immunoglobulin ARHGEF11 9826 genome.wustl.edu 37 1 156954218 156954218 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_198236.1 -1 reviewed p.R46C 0.993 38 0% 68 30.9% 2 0% probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_PDZ SPTA1 6708 genome.wustl.edu 37 1 158641158 158641158 + Missense_Mutation SNP A A T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_003126.2 -1 reviewed p.F525Y 1.000 142 0% 65 41.5% 0 - probably_damaging(0.979) deleterious(0) deleterious(0.867) HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat FMNL2 114793 genome.wustl.edu 37 2 153476066 153476067 + In_Frame_Ins INS - - CCA rs5835439 TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_052905.3 +1 reviewed p.561in_frame_insP 0.918:0.955 - - - - - - - - - NULL XIRP2 129446 genome.wustl.edu 37 2 168105921 168105921 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_152381.4 +1 validated p.C2673 0.191 118 0% 14 35.7% 0 - - - - NULL UGT1A10 54575 genome.wustl.edu 37 2 234545246 234545246 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_019075.2 +1 reviewed p.G26 0.990 221 0% 127 34.6% 0 - - - - HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase RPL14 9045 genome.wustl.edu 37 3 40503520 40503521 + In_Frame_Ins INS - - CTGCTG rs61749576 byFrequency TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001034996.1 +1 reviewed p.153in_frame_insAA 0.019:0.022 - - - - - - - - - NULL CTNNB1 1499 genome.wustl.edu 37 3 41266098 41266098 + Missense_Mutation SNP A A G rs121913396 byCluster TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001098209.1 +1 reviewed p.D32G 1.000 40 0% 67 37.3% 60 11.6% probably_damaging(1) deleterious(0) deleterious(0.945) NULL TMIE 259236 genome.wustl.edu 37 3 46751115 46751115 + Silent SNP A A T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_147196.2 +1 reviewed p.T136 0.996 160 0% 292 32.2% 0 - - - - NULL ERC2 26059 genome.wustl.edu 37 3 56044602 56044602 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_015576.1 -1 validated p.R599C 1.000 540 0% 121 42.1% 0 - probably_damaging(1) deleterious(0) deleterious(0.945) superfamily_Prefoldin,HMMPfam_Cast PIK3CA 5290 genome.wustl.edu 37 3 178936082 178936082 + Missense_Mutation SNP G G A rs121913273 TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_006218.2 +1 reviewed p.E542K 1.000 89 0% 50 28% 1 0% probably_damaging(0.989) deleterious(0.03) deleterious(0.804) HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold NDST4 64579 genome.wustl.edu 37 4 115997437 115997437 + Frame_Shift_Del DEL G G - novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_022569.1 -1 provisional p.F253fs 0.635 - - - - - - - - - NULL NDST4 64579 genome.wustl.edu 37 4 115997534 115997534 + Nonsense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_022569.1 -1 provisional p.W220* 1.000 253 0% 68 23.5% 0 - - - - NULL MTMR12 54545 genome.wustl.edu 37 5 32230203 32230203 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001040446.1 -1 reviewed p.R642H 1.000 66 0% 91 39.6% 9 33.3% probably_damaging(1) tolerated(0.3) deleterious(0.528) superfamily_(Phosphotyrosine protein) phosphatases II HEXB 3074 genome.wustl.edu 37 5 73985275 73985275 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_000521.3 +1 reviewed p.P141L 0.998 103 0% 195 12.3% 34 2.9% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Glyco_hydro_20b,superfamily_beta-N-acetylhexosaminidase-like domain FAT2 2196 genome.wustl.edu 37 5 150924797 150924797 + Missense_Mutation SNP T T C novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001447.2 -1 reviewed p.K1964R 0.002 167 0% 64 17.2% 0 - benign(0.027) tolerated(0.17) neutral(0.060) HMMSmart_SM00112 KIAA0319 9856 genome.wustl.edu 37 6 24564465 24564465 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_014809.3 -1 reviewed p.S799L 0.105 24 0% 51 43.1% 1 100% probably_damaging(0.996) deleterious(0.01) deleterious(0.867) HMMSmart_SM00089,superfamily_PKD domain,HMMSmart_SM00060 RMND1 55005 genome.wustl.edu 37 6 151738458 151738458 + Missense_Mutation SNP A A G novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_017909.2 -1 validated p.Y386H 1.000 183 0% 153 33.3% 27 40.7% probably_damaging(0.999) deleterious(0) deleterious(0.935) HMMPfam_DUF155 SCAF8 22828 genome.wustl.edu 37 6 155145385 155145385 + Silent SNP C C G novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_014892.3 +1 validated p.A648 0.499 408 0% 131 34.4% 9 33.3% - - - NULL ZMIZ2 83637 genome.wustl.edu 37 7 44798936 44798936 + Missense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_031449.3 +1 validated p.Q290H 1.000 8 0.000 61 0.311 22 27.2% probably_damaging(0.998) deleterious(0) deleterious(0.919) NULL ZPBP 11055 genome.wustl.edu 37 7 50023093 50023093 + Missense_Mutation SNP A A T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_007009.2 -1 validated p.F269Y 1.000 33 0% 94 39.4% 0 - benign(0.195) deleterious(0) neutral(0.463) HMMPfam_Sp38 CHRNA2 1135 genome.wustl.edu 37 8 27327369 27327369 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_000742.3 -1 reviewed p.R68Q 0.097 27 0% 98 38.8% 0 - possibly_damaging(0.516) tolerated(0.4) neutral(0.190) HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like RNF19A 25897 genome.wustl.edu 37 8 101271122 101271122 + Missense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_015435.3 -1 reviewed p.H727N 1.000 327 0% 148 32.4% 8 12.5% probably_damaging(0.958) deleterious(0) deleterious(0.846) NULL KCNV1 27012 genome.wustl.edu 37 8 110986321 110986321 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_014379.2 -1 reviewed p.N99 0.998 6 0.000 42 0.476 0 - - - - HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain CDKN2A 1029 genome.wustl.edu 37 9 21971028 21971028 + Nonsense_Mutation SNP C C T rs121913389 TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_000077.3 -1 reviewed p.W110* 0.983 5 0.000 23 0.217 134 25.3% - - - superfamily_Ankyrin repeat DCAF10 79269 genome.wustl.edu 37 9 37861385 37861385 + Silent SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_024345.3 +1 validated p.V520 1.000 192 0% 97 27.8% 8 62.5% - - - HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40 MUSK 4593 genome.wustl.edu 37 9 113547894 113547894 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_005592.3 +1 reviewed p.P558 0.993 137 0% 230 33.5% 1 0% - - - NULL KIF12 113220 genome.wustl.edu 37 9 116860020 116860020 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000259410 -1 known p.G121E 0.698 47 0% 108 35.2% 22 45.4% possibly_damaging(0.865) tolerated(0.09) deleterious(0.631) HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540 PTCHD3 374308 genome.wustl.edu 37 10 27703174 27703174 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001034842.3 -1 validated p.P2 0.000 10 0% 29 37.9% 0 - - - - NULL WDFY4 57705 genome.wustl.edu 37 10 49931532 49931532 + Missense_Mutation SNP C C A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_020945.1 +1 validated p.L171I 1.000 100 0% 141 29.1% 0 - probably_damaging(0.998) deleterious(0.01) deleterious(0.880) NULL PTEN 5728 genome.wustl.edu 37 10 89692787 89692787 + Nonsense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000371953 +1 known p.E91* 1.000 411 0% 137 27% 13 7.6% - - - HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II PTEN 5728 genome.wustl.edu 37 10 89692904 89692904 + Missense_Mutation SNP C C G rs121909224 byCluster TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000371953 +1 known p.R130G 1.000 353 0% 101 32.7% 10 20% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_DSPc,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II MADD 8567 genome.wustl.edu 37 11 47303965 47303965 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_003682.3 +1 reviewed p.N501 1.000 96 0% 151 35.1% 4 75% - - - HMMPfam_dDENN,HMMSmart_SM00801 OR8H2 390151 genome.wustl.edu 37 11 55873414 55873414 + Missense_Mutation SNP A A T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001005200.1 +1 provisional p.N299I 0.227 155 0% 76 34.2% 0 - possibly_damaging(0.701) tolerated(0.1) deleterious(0.538) superfamily_SSF81321 CDCA5 113130 genome.wustl.edu 37 11 64846705 64846705 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000404147 -1 known p.H266 0.000 84 0% 130 38.5% 0 - - - - NULL C11orf80 79703 genome.wustl.edu 37 11 66512290 66512291 + In_Frame_Ins INS - - GGC novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_024650.3 +1 validated p.30in_frame_insA 0.001:0.003 - - - - - - - - - NULL CPT1A 1374 genome.wustl.edu 37 11 68527038 68527038 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001876.3 -1 reviewed p.T745M 1.000 41 0% 89 33.7% 10 20% probably_damaging(1) deleterious(0) deleterious(0.945) HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases USP35 57558 genome.wustl.edu 37 11 77919935 77919935 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_020798.2 +1 provisional p.S506 0.998 71 0% 125 30.4% 4 25% - - - HMMPfam_UCH,superfamily_Cysteine proteinases KIAA1731 85459 genome.wustl.edu 37 11 93400895 93400895 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_033395.1 +1 validated p.Q77 1.000 94 0% 57 33.3% 1 100% - - - NULL CADM1 23705 genome.wustl.edu 37 11 115102158 115102158 + Silent SNP A A G novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_014333.3 -1 validated p.G159 0.000 235 0% 156 29.5% 57 35% - - - HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin CHD4 1108 genome.wustl.edu 37 12 6697522 6697522 + Missense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001273.2 -1 reviewed p.A1136D 1.000 128 0.8% 134 41% 17 23.5% possibly_damaging(0.812) deleterious(0) deleterious(0.750) HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases ITPR2 3709 genome.wustl.edu 37 12 26755312 26755312 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_002223.2 -1 validated p.P1223 0.957 140 0% 32 56.2% 0 - - - - HMMPfam_RYDR_ITPR GPR182 11318 genome.wustl.edu 37 12 57389718 57389718 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_007264.3 +1 reviewed p.A242V 0.991 118 0% 93 41.9% 0 - benign(0.181) deleterious(0.02) neutral(0.400) HMMPfam_7tm_1,superfamily_SSF81321 FGD6 55785 genome.wustl.edu 37 12 95604391 95604391 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_018351.3 -1 validated p.A223 0.000 103 0% 95 30.5% 1 0% - - - NULL SELPLG 6404 genome.wustl.edu 37 12 109017667 109017667 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000228463 -1 known p.T139 0.000 310 2.6% 525 24.4% 0 - - - - NULL SETD1B 23067 genome.wustl.edu 37 12 122265902 122265902 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_015048.1 +1 validated p.R1842W 1.000 165 0% 204 30.9% 17 11.7% unknown(0) - - HMMPfam_SET,HMMSmart_SET,superfamily_SSF82199 SETD1B 23067 genome.wustl.edu 37 12 122265929 122265929 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_015048.1 +1 validated p.A1851T 1.000 125 0% 162 32.1% 15 20% unknown(0) - - HMMPfam_SET,HMMSmart_SET,superfamily_SSF82199 ZNF268 10795 genome.wustl.edu 37 12 133779972 133779972 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_003415.2 +1 validated p.R567Q 0.000 116 0% 80 40% 0 - benign(0.067) tolerated(0.4) neutral(0.021) HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers GAS6 2621 genome.wustl.edu 37 13 114530024 114530024 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_000820.2 -1 reviewed p.T474 0.000 13 0% 121 36.4% 253 1.9% - - - superfamily_ConA_like_lec_gl OR4K5 79317 genome.wustl.edu 37 14 20389327 20389327 + Missense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001005483.1 +1 provisional p.A188S 0.329 1150 0% 273 10.6% 0 - benign(0.036) deleterious(0.03) neutral(0.366) HMMPfam_7tm_1,superfamily_SSF81321 ENSG00000136315 0 genome.wustl.edu 37 14 21388172 21388172 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000258817 +1 known p.A124 0.000 207 0% 75 29.3% 3 0% - - - HMMPfam_RnaseA,HMMSmart_SM00092,superfamily_RNase A-like FLRT2 23768 genome.wustl.edu 37 14 86089691 86089691 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_013231.4 +1 reviewed p.S611 1.000 27 0% 38 36.8% 0 - - - - NULL BCL11B 64919 genome.wustl.edu 37 14 99641793 99641793 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_138576.2 -1 reviewed p.C460 1.000 10 0% 26 23.1% 0 - - - - HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers TMEM62 80021 genome.wustl.edu 37 15 43476493 43476493 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_024956.3 +1 provisional p.M547I 1.000 142 0% 355 34.9% 16 25% benign(0) tolerated(0.36) neutral(0.020) NULL ADAMTS7 11173 genome.wustl.edu 37 15 79058987 79058987 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_014272.3 -1 reviewed p.A1089V 0.000 8 0.000 112 0.366 9 33.3% benign(0) tolerated(1) - NULL ABCA3 21 genome.wustl.edu 37 16 2334851 2334851 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001089.2 -1 reviewed p.T1211M 0.832 18 0% 99 33.3% 4 0% probably_damaging(0.967) deleterious(0.04) deleterious(0.758) NULL ZNF213 7760 genome.wustl.edu 37 16 3190884 3190884 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001134655.1 +1 validated p.R306C 0.708 6 0.000 16 0.375 8 12.5% probably_damaging(1) tolerated(0.09) deleterious(0.796) NULL C17orf81 23587 genome.wustl.edu 37 17 7158018 7158018 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_015362.3 +1 validated p.P118L 0.464 52 0% 138 37% 149 26.8% probably_damaging(0.954) deleterious(0.04) deleterious(0.746) HMMPfam_Hap2_elong SARM1 23098 genome.wustl.edu 37 17 26699367 26699368 + Frame_Shift_Ins INS - - C rs34421136 byCluster;by1000genomes TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000379061 +1 known p.A104fs 1.000:1.000 - - - - - - - - - superfamily_ARM repeat CDH7 1005 genome.wustl.edu 37 18 63511085 63511085 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_004361.2 +1 reviewed p.R340Q 0.133 131 0% 48 27.1% 0 - probably_damaging(0.987) tolerated(0.07) deleterious(0.756) HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like UBA52 7311 genome.wustl.edu 37 19 18684492 18684492 + Missense_Mutation SNP C C G novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_001033930.1 +1 reviewed p.R42G 1.000 78 0% 124 33.1% 2882 33.9% probably_damaging(0.969) deleterious(0) deleterious(0.856) HMMPfam_ubiquitin,HMMSmart_SM00213,PatternScan_UBIQUITIN_1,superfamily_Ubiquitin-like HPN 3249 genome.wustl.edu 37 19 35551550 35551550 + Missense_Mutation SNP C C G novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_002151.2 +1 reviewed p.R214G 0.111 16 0% 77 35.1% 33 51.5% possibly_damaging(0.945) tolerated(0.16) neutral(0.449) HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys MLL4 9757 genome.wustl.edu 37 19 36210381 36210381 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_014727.1 +1 reviewed p.G125D 1.000 78 0% 246 33.3% 0 - unknown(0) - - NULL RDH13 112724 genome.wustl.edu 37 19 55568131 55568131 + Missense_Mutation SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_138412.3 -1 reviewed p.A6V 0.562 54 0% 141 40.4% 8 37.5% benign(0) tolerated(0.24) neutral(0.037) superfamily_NAD(P)-binding Rossmann-fold domains COX6B2 125965 genome.wustl.edu 37 19 55865140 55865140 + Silent SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_144613.4 -1 validated p.V72 0.997 76 0% 95 31.6% 2 0% - - - HMMPfam_COX6B,superfamily_Cyt_c_oxidase_6B NLRP8 126205 genome.wustl.edu 37 19 56466488 56466488 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_176811.2 +1 provisional p.P355L 0.001 138 0% 99 40.4% 0 - benign(0.006) tolerated(1) - HMMPfam_NACHT LOC729057 729057 genome.wustl.edu 37 22 16123203 16123203 + RNA SNP T T C rs7292373 byCluster;by2Hit2Allele TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 XR_042044.2 +1 model NULL 0.969 68 0% 256 9.4% 12 0% - - - - CLTCL1 8218 genome.wustl.edu 37 22 19168259 19168259 + Missense_Mutation SNP C C A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_007098.3 -1 reviewed p.A1630S 0.000 18 0% 123 25.2% 7 28.5% benign(0.004) tolerated(0.35) neutral(0.021) NULL MN1 4330 genome.wustl.edu 37 22 28193835 28193835 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_002430.2 -1 reviewed p.S899 0.868 14 0% 45 37.8% 0 - - - - NULL CARD10 29775 genome.wustl.edu 37 22 37906309 37906314 + In_Frame_Del DEL CTCCTT CTCCTT - rs113275238 byCluster;by1000genomes TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 CTCCTT CTCCTT Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_014550.3 -1 reviewed p.KE272in_frame_del 0.939:0.949:0.957:0.963:0.966:0.967 - - - - - - - - - NULL PNPLA3 80339 genome.wustl.edu 37 22 44328899 44328899 + Missense_Mutation SNP C C T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_025225.2 +1 reviewed p.L210F 0.100 82 0% 198 33.3% 2 50% benign(0.359) tolerated(0.06) neutral(0.436) NULL ENSG00000211459 0 genome.wustl.edu 37 MT 943 943 + RNA SNP G G C novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000389680 +1 known NULL NULL 48 0% 47 74.5% 5363 63.2% - - - - WAS 7454 genome.wustl.edu 37 X 48545265 48545265 + Nonsense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_000377.2 +1 reviewed p.G219* 0.014 122 0% 182 35.7% 16 0% - - - NULL PQBP1 10084 genome.wustl.edu 37 X 48759802 48759802 + Silent SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 ENST00000376548 +1 known p.L195 0.045 47 0% 46 34.8% 4 0% - - - NULL ARHGEF9 23229 genome.wustl.edu 37 X 62917005 62917005 + Silent SNP G G A novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_015185.2 -1 reviewed p.H187 0.977 272 0% 97 38.1% 4 0% - - - HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain MAP7D3 79649 genome.wustl.edu 37 X 135313917 135313917 + Missense_Mutation SNP G G T novel TCGA-BK-A0CB-01A-32D-A10B-09 TCGA-BK-A0CB-10A-05W-A10C-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 1d968ad6-345d-4432-a992-47163d027a46 e43ef24c-f60f-40df-80a5-a997bcac0284 NM_024597.3 -1 reviewed p.A400E 0.000 101 1% 76 23.7% 1 0% benign(0.004) deleterious(0.01) neutral(0.406) NULL